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The map label for this gene is ycgM [C]

Identifier: 154247190

GI number: 154247190

Start: 3624210

End: 3624899

Strand: Reverse

Name: ycgM [C]

Synonym: Xaut_3262

Alternate gene names: 154247190

Gene position: 3624899-3624210 (Counterclockwise)

Preceding gene: 154247192

Following gene: 154247177

Centisome position: 68.28

GC content: 66.23

Gene sequence:

>690_bases
ATGGTCTCTTATGTCTTCGCGCCGCCCGCCGTCCCCACCCTTCCCATCGTGGGCAGCGATGATCACTTCCCGGTCCACCG
CATCTATTGCGTCGGCCGCAACTTCGCCGACCATGCGGTGGAGATGGGCCATGATCCCAACAAGGAGCCGCCCTTCTTCT
TCCAGAAGAATCCAGACACCCTGGTGCCCAACGGCGCGACCATCGCCTATCCGAAGATGTCGCAGGACGTGCACCATGAG
ATCGAGCTGGTGGTGGCGCTGAAGGCCGGCGGCGAGGACATTCCGCTGGAGCGGGCGCTTGACTGTGTGTTCGGCTATGC
GGTGGGCCTCGACCTCACCCGCCGCGACCTGCAGGGCGAGGCCAAGAAACTCGGCCGCCCGTGGGAAGTGGGCAAGGCGT
TTGAGGAAGCCGCGCCCTGCTCGGCCCTGGTGCCGGCAACCACCATCGGCCATCCGGACGCGGGGCGGATCTTCCTGAAG
ATCAACGGTGCAGTGAAGCAGGAGGGCAACCTCAACCAGATGATCTGGAAGGTGCCGGAGATGATCGCCACCCTCTCCAC
CCTGTTCCGGCTCGCCCCCGGCGACCTCATCTTCGCCGGCACCCCGGCCGGCGTCGGCCCCATCTCCAAGGGCGACGTGC
TGGAAGGCGGCGTCGAGGGCGTGGGCGAACTCCGGCTGACGGTGGTCTGA

Upstream 100 bases:

>100_bases
TATTACATCGGATATAACTGAGCAGCCAAGGCACCCCGCGCACCCTTCCCTCCCCGCCGGCTGCGTCCTATGGAAAGGAA
CCCCTCCCCGGAGCCTTGCC

Downstream 100 bases:

>100_bases
ACGACGTCTGGGCGGCCGTCCGCGCGGCCGTTGCTCGCAAGGCGCTGCCTGCGACCCGACAAAGGCAGGGGCTGCCAAGC
CCCTGCCCTAAGTCCTAGCG

Product: fumarylacetoacetate (FAA) hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MVSYVFAPPAVPTLPIVGSDDHFPVHRIYCVGRNFADHAVEMGHDPNKEPPFFFQKNPDTLVPNGATIAYPKMSQDVHHE
IELVVALKAGGEDIPLERALDCVFGYAVGLDLTRRDLQGEAKKLGRPWEVGKAFEEAAPCSALVPATTIGHPDAGRIFLK
INGAVKQEGNLNQMIWKVPEMIATLSTLFRLAPGDLIFAGTPAGVGPISKGDVLEGGVEGVGELRLTVV

Sequences:

>Translated_229_residues
MVSYVFAPPAVPTLPIVGSDDHFPVHRIYCVGRNFADHAVEMGHDPNKEPPFFFQKNPDTLVPNGATIAYPKMSQDVHHE
IELVVALKAGGEDIPLERALDCVFGYAVGLDLTRRDLQGEAKKLGRPWEVGKAFEEAAPCSALVPATTIGHPDAGRIFLK
INGAVKQEGNLNQMIWKVPEMIATLSTLFRLAPGDLIFAGTPAGVGPISKGDVLEGGVEGVGELRLTVV
>Mature_229_residues
MVSYVFAPPAVPTLPIVGSDDHFPVHRIYCVGRNFADHAVEMGHDPNKEPPFFFQKNPDTLVPNGATIAYPKMSQDVHHE
IELVVALKAGGEDIPLERALDCVFGYAVGLDLTRRDLQGEAKKLGRPWEVGKAFEEAAPCSALVPATTIGHPDAGRIFLK
INGAVKQEGNLNQMIWKVPEMIATLSTLFRLAPGDLIFAGTPAGVGPISKGDVLEGGVEGVGELRLTVV

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=202, Percent_Identity=40.5940594059406, Blast_Score=162, Evalue=2e-40,
Organism=Homo sapiens, GI215422413, Length=194, Percent_Identity=41.2371134020619, Blast_Score=162, Evalue=3e-40,
Organism=Homo sapiens, GI66348062, Length=196, Percent_Identity=40.8163265306122, Blast_Score=162, Evalue=3e-40,
Organism=Homo sapiens, GI156231349, Length=204, Percent_Identity=34.3137254901961, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI40786394, Length=204, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=9e-25,
Organism=Escherichia coli, GI1787428, Length=200, Percent_Identity=40, Blast_Score=144, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17557057, Length=192, Percent_Identity=38.5416666666667, Blast_Score=148, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6324161, Length=217, Percent_Identity=31.3364055299539, Blast_Score=118, Evalue=7e-28,
Organism=Drosophila melanogaster, GI28571789, Length=203, Percent_Identity=31.5270935960591, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI28572127, Length=212, Percent_Identity=33.9622641509434, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24663695, Length=219, Percent_Identity=28.310502283105, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 24586; Mature: 24586

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSYVFAPPAVPTLPIVGSDDHFPVHRIYCVGRNFADHAVEMGHDPNKEPPFFFQKNPDT
CCEEEECCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCCE
LVPNGATIAYPKMSQDVHHEIELVVALKAGGEDIPLERALDCVFGYAVGLDLTRRDLQGE
ECCCCCEEECCCCCCHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
AKKLGRPWEVGKAFEEAAPCSALVPATTIGHPDAGRIFLKINGAVKQEGNLNQMIWKVPE
HHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
MIATLSTLFRLAPGDLIFAGTPAGVGPISKGDVLEGGVEGVGELRLTVV
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MVSYVFAPPAVPTLPIVGSDDHFPVHRIYCVGRNFADHAVEMGHDPNKEPPFFFQKNPDT
CCEEEECCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCCE
LVPNGATIAYPKMSQDVHHEIELVVALKAGGEDIPLERALDCVFGYAVGLDLTRRDLQGE
ECCCCCEEECCCCCCHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
AKKLGRPWEVGKAFEEAAPCSALVPATTIGHPDAGRIFLKINGAVKQEGNLNQMIWKVPE
HHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
MIATLSTLFRLAPGDLIFAGTPAGVGPISKGDVLEGGVEGVGELRLTVV
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]