| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is xlnD [H]
Identifier: 154247159
GI number: 154247159
Start: 3581141
End: 3582343
Strand: Reverse
Name: xlnD [H]
Synonym: Xaut_3231
Alternate gene names: 154247159
Gene position: 3582343-3581141 (Counterclockwise)
Preceding gene: 154247160
Following gene: 154247158
Centisome position: 67.48
GC content: 74.15
Gene sequence:
>1203_bases ATGGCCGACCCCATTCCCTTCGCGCCTGTCCCCTTTCGGCCACAGCCCGTCCGCGCGGCGCGCAGTGCCGTCGTGGTGGG GGCGGGAATCGGCGGGCTTGCCGCCGCCATCGCCCTGGCCCGCGCCGGCCTCACGGTGCAGGTGGTGGAGCAGGCGAAGA AGCTGAAGGAGGTCGGCGCCGGCCTCCAGCTCACCCCCAACGCCACCCGCATCCTGCGCGATTTCGGCCTGCTGAAGCGC CTCGAGCAGGTGGCGGTGGCCCCGCGCTCCCTGGATGTGCGCGACGGGCGCAGCGGCGCCACCATCACCCGCGCCCATTA CGGACCGGCGGTGACGCGCTACGGCGCGCCCTTCCTCGTGGTGCACCGGGCGGACCTGCAGAACCTGCTGGCCGATGCGG CCCGGGAGGCAGGCGCCATCCTGACCCTCGGCTCCGACCTGACGGCGGTGGAACCCTCCTTCGGCGGCGTTCGCGCGGTG GTGAAGCAGGGCGACACCCTGCTGGCCCATGGCGCCGACATCCTCGTCGGCGCCGACGGCGTGCGCTCTGCGGTGCGCGC CCATCTCGGCGTCAAGGACCCGCCGGTCTTCGCCCAGCGCCTTGCCTATCGCGCCACCGTGCCGGTGCCGGCGCGCCATC CGCCCGACGTGCGGCTCTATCTCGGCCGCGACGCCCATCTGGTGGTCTATCCGGTGAAGGGCGGCGAGGTGCTCAACCTC GTCGCCATCGTGAAGCAGACCGAGCCCGTGGCCCGCTGGAGCGCGCCCGGCGACAGCGCCGCCGTGCATGCCGCCTTCGC CTCCTGGACCGGCGAGGTGCGCGCGCTCCTGGAAAGCGCCTCCCATTTCCTGTGCTGGGGGCTCTACGACATCGATCCCC TGCCCCGCTGGGGTTCCGGCCGCGTCACGCTCTTGGGCGATGCCGCCCATGCCATGCTGCCCTTCCTCGCCCAGGGCGCG GCGCAGGCCATCGAGGATGCGGCGAGCCTTGCCGGCGCGCTGACCCGCGAGGGCGATGCCGCCGCCGCCCTGCGCGCCTA TGAGAGCGAGCGGCGCGGCCGCACCGCCCGCATCCAGGGCGAGGCGCGGCGCAACGGCATGATCTACCACCTCTCCGGCG CGCCCCGGATCGCCCGCGACCTGGTGCTGCGCCGCCAGGGCCCGGCCCTGCTGGACCGCTACGGCTGGATCTACGGCGCC TGA
Upstream 100 bases:
>100_bases GGCCAAGCCGGAAGAGTGCGAGTGGCACGACACCCCGGCGGCCACCGCCGCCTGACCGAAAGCTGATCCGCCGGCTCCCC GCGCGGAGCCGGATGCCGCC
Downstream 100 bases:
>100_bases GGGGCCGGGCCGGTACGGGCATCGCCGCCCGCCCTCTGGACCTTCCCCCACGGCCGTGGTATCGGCCCGCCTCTCTCCCG AGGAAGATGTTCTCGTGCAG
Product: monooxygenase FAD-binding
Products: NA
Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MADPIPFAPVPFRPQPVRAARSAVVVGAGIGGLAAAIALARAGLTVQVVEQAKKLKEVGAGLQLTPNATRILRDFGLLKR LEQVAVAPRSLDVRDGRSGATITRAHYGPAVTRYGAPFLVVHRADLQNLLADAAREAGAILTLGSDLTAVEPSFGGVRAV VKQGDTLLAHGADILVGADGVRSAVRAHLGVKDPPVFAQRLAYRATVPVPARHPPDVRLYLGRDAHLVVYPVKGGEVLNL VAIVKQTEPVARWSAPGDSAAVHAAFASWTGEVRALLESASHFLCWGLYDIDPLPRWGSGRVTLLGDAAHAMLPFLAQGA AQAIEDAASLAGALTREGDAAAALRAYESERRGRTARIQGEARRNGMIYHLSGAPRIARDLVLRRQGPALLDRYGWIYGA
Sequences:
>Translated_400_residues MADPIPFAPVPFRPQPVRAARSAVVVGAGIGGLAAAIALARAGLTVQVVEQAKKLKEVGAGLQLTPNATRILRDFGLLKR LEQVAVAPRSLDVRDGRSGATITRAHYGPAVTRYGAPFLVVHRADLQNLLADAAREAGAILTLGSDLTAVEPSFGGVRAV VKQGDTLLAHGADILVGADGVRSAVRAHLGVKDPPVFAQRLAYRATVPVPARHPPDVRLYLGRDAHLVVYPVKGGEVLNL VAIVKQTEPVARWSAPGDSAAVHAAFASWTGEVRALLESASHFLCWGLYDIDPLPRWGSGRVTLLGDAAHAMLPFLAQGA AQAIEDAASLAGALTREGDAAAALRAYESERRGRTARIQGEARRNGMIYHLSGAPRIARDLVLRRQGPALLDRYGWIYGA >Mature_399_residues ADPIPFAPVPFRPQPVRAARSAVVVGAGIGGLAAAIALARAGLTVQVVEQAKKLKEVGAGLQLTPNATRILRDFGLLKRL EQVAVAPRSLDVRDGRSGATITRAHYGPAVTRYGAPFLVVHRADLQNLLADAAREAGAILTLGSDLTAVEPSFGGVRAVV KQGDTLLAHGADILVGADGVRSAVRAHLGVKDPPVFAQRLAYRATVPVPARHPPDVRLYLGRDAHLVVYPVKGGEVLNLV AIVKQTEPVARWSAPGDSAAVHAAFASWTGEVRALLESASHFLCWGLYDIDPLPRWGSGRVTLLGDAAHAMLPFLAQGAA QAIEDAASLAGALTREGDAAAALRAYESERRGRTARIQGEARRNGMIYHLSGAPRIARDLVLRRQGPALLDRYGWIYGA
Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.24 [H]
Molecular weight: Translated: 42260; Mature: 42129
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPIPFAPVPFRPQPVRAARSAVVVGAGIGGLAAAIALARAGLTVQVVEQAKKLKEVGA CCCCCCCCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC GLQLTPNATRILRDFGLLKRLEQVAVAPRSLDVRDGRSGATITRAHYGPAVTRYGAPFLV CCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEE VHRADLQNLLADAAREAGAILTLGSDLTAVEPSFGGVRAVVKQGDTLLAHGADILVGADG EEHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEECCCEEEEECHH VRSAVRAHLGVKDPPVFAQRLAYRATVPVPARHPPDVRLYLGRDAHLVVYPVKGGEVLNL HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHH VAIVKQTEPVARWSAPGDSAAVHAAFASWTGEVRALLESASHFLCWGLYDIDPLPRWGSG HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC RVTLLGDAAHAMLPFLAQGAAQAIEDAASLAGALTREGDAAAALRAYESERRGRTARIQG CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEC EARRNGMIYHLSGAPRIARDLVLRRQGPALLDRYGWIYGA HHHHCCEEEEECCCCHHHHHHHHHCCCCHHHHHCCCCCCC >Mature Secondary Structure ADPIPFAPVPFRPQPVRAARSAVVVGAGIGGLAAAIALARAGLTVQVVEQAKKLKEVGA CCCCCCCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC GLQLTPNATRILRDFGLLKRLEQVAVAPRSLDVRDGRSGATITRAHYGPAVTRYGAPFLV CCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEE VHRADLQNLLADAAREAGAILTLGSDLTAVEPSFGGVRAVVKQGDTLLAHGADILVGADG EEHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEECCCEEEEECHH VRSAVRAHLGVKDPPVFAQRLAYRATVPVPARHPPDVRLYLGRDAHLVVYPVKGGEVLNL HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHH VAIVKQTEPVARWSAPGDSAAVHAAFASWTGEVRALLESASHFLCWGLYDIDPLPRWGSG HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC RVTLLGDAAHAMLPFLAQGAAQAIEDAASLAGALTREGDAAAALRAYESERRGRTARIQG CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEC EARRNGMIYHLSGAPRIARDLVLRRQGPALLDRYGWIYGA HHHHCCEEEEECCCCHHHHHHHHHCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12909360 [H]