| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247157
Identifier: 154247157
GI number: 154247157
Start: 3579006
End: 3580244
Strand: Reverse
Name: 154247157
Synonym: Xaut_3229
Alternate gene names: NA
Gene position: 3580244-3579006 (Counterclockwise)
Preceding gene: 154247158
Following gene: 154247156
Centisome position: 67.44
GC content: 67.72
Gene sequence:
>1239_bases ATGACGTCACGTCGATCGCTCGATCCGCGCGCCCTGTTCCATCCGCGACCGCTGCTGGTAGCGGCGGCGCTCTGCGGCCT CATGGCCGGCGCCGCGCGGGCCGAGGACACCACCGTCAAGCTCGGCGTGCTCAACGACATGTCCGGCGTCTATGCCGACA TTTCCGGGCCCGGCTCGGTGGTGGCCGCGCAGATGGCGGCCCAGGACTTCATGGCCAAGAACAAGGGCTTCAAGGTGGAG GTGGTGGGCGCCGACCACCAGAACAAGCCGGATGTCGGCTCCTCCATCGCCCGCAAGTGGTACGACCAGGACGGGGTGGA CGCCATCATGGATGTCACCACCTCCTCGGTGGCGCTGGCGGTGAATGACGTGACGCGGGAGAAGAACAAGATCTTCCTCG TCTCCGGCGGCGGCACCTCCGACCTCACCGGCGCCAAGTGCTCGCCCAACACCGTGCACTGGACCTACGACACCTGGGCG CTCGCCAACGGCACCGGTTCGGCGATCACCAAGCAGGGCGGCTCGCCCTGGTTCTTCATCACCGCCGACTATGCCTTCGG CGCGGCGCTGGAGCGTGACGCGGCCGCCGCCGTGAAGGCCGCGGGCGGCAAGGTCGCCGGCAGCGTGAAGCACCCGCTCT CCGCCACCGACTTCTCGTCCTTCCTGGTGCAGGCGCAGTCCTCCGGCGCCAAGGTGATCGGCCTCGCCAATGCCGGCGGC GACCTCATCAACGCCATCAAGCAGGCTTCCGAGTTCGGCATCACCCAGGGCGGCCAGTCGCTGGCCGGGCTGCTGATCTT CTCCTCCGACGTGAAGGCGATGGGGCTGACCGCCGCGCAGGGCCTGCTGCTCACCGAGGCCTTCTACTGGGACCTCAACG ACGACACCCGCGCCTTCTCCAAGCGCTTCGCCGAGAAGTTCGGCGGCAAGATGCCGACTAGCGCGCAGGCCGGCGTGTAT TCCAGCGCGCTGCACTATCTCAACGCCATCAAGGACGCCAAGACCAAGGACGCGCCCAAGGTGATGGAGCAGATGCGCGC CACCCCCATCGACGACCCGCTGTTCGGCAAGGGCGAAGTGCGCATCGACGGTCGCGCCACCCACCCCATGTACCTCTTCA AGGTGAAGAAACCGGCCGACTCCAAGGGCCCGTGGGACCTCTACGAGGTGGTCGCCACCATCCCCGCCAACGATGCCTTC CGCCCGCTCAAGGACGGCGGCTGCCCGCTGGTGAAGTAG
Upstream 100 bases:
>100_bases TCCCCGGCCTCGGCCCGTGCTTACGTCAACACCATAAGAACCAGCCGCCGGCCTGTCGCAGGCCGGGCGAAAATATAAGA ATCACAAGGGAGAGACCTAA
Downstream 100 bases:
>100_bases GACGGGGCGCTCTTAAACCACCTACCGCGGGCCGCGCGCCGGCCCCTCACGATGCAGATCGGCCCTCCCCACCGGGAGGG CCTTTCTTTTGGGCCGACGC
Product: putative ABC branched-chain amino transporter, periplasmic binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MTSRRSLDPRALFHPRPLLVAAALCGLMAGAARAEDTTVKLGVLNDMSGVYADISGPGSVVAAQMAAQDFMAKNKGFKVE VVGADHQNKPDVGSSIARKWYDQDGVDAIMDVTTSSVALAVNDVTREKNKIFLVSGGGTSDLTGAKCSPNTVHWTYDTWA LANGTGSAITKQGGSPWFFITADYAFGAALERDAAAAVKAAGGKVAGSVKHPLSATDFSSFLVQAQSSGAKVIGLANAGG DLINAIKQASEFGITQGGQSLAGLLIFSSDVKAMGLTAAQGLLLTEAFYWDLNDDTRAFSKRFAEKFGGKMPTSAQAGVY SSALHYLNAIKDAKTKDAPKVMEQMRATPIDDPLFGKGEVRIDGRATHPMYLFKVKKPADSKGPWDLYEVVATIPANDAF RPLKDGGCPLVK
Sequences:
>Translated_412_residues MTSRRSLDPRALFHPRPLLVAAALCGLMAGAARAEDTTVKLGVLNDMSGVYADISGPGSVVAAQMAAQDFMAKNKGFKVE VVGADHQNKPDVGSSIARKWYDQDGVDAIMDVTTSSVALAVNDVTREKNKIFLVSGGGTSDLTGAKCSPNTVHWTYDTWA LANGTGSAITKQGGSPWFFITADYAFGAALERDAAAAVKAAGGKVAGSVKHPLSATDFSSFLVQAQSSGAKVIGLANAGG DLINAIKQASEFGITQGGQSLAGLLIFSSDVKAMGLTAAQGLLLTEAFYWDLNDDTRAFSKRFAEKFGGKMPTSAQAGVY SSALHYLNAIKDAKTKDAPKVMEQMRATPIDDPLFGKGEVRIDGRATHPMYLFKVKKPADSKGPWDLYEVVATIPANDAF RPLKDGGCPLVK >Mature_411_residues TSRRSLDPRALFHPRPLLVAAALCGLMAGAARAEDTTVKLGVLNDMSGVYADISGPGSVVAAQMAAQDFMAKNKGFKVEV VGADHQNKPDVGSSIARKWYDQDGVDAIMDVTTSSVALAVNDVTREKNKIFLVSGGGTSDLTGAKCSPNTVHWTYDTWAL ANGTGSAITKQGGSPWFFITADYAFGAALERDAAAAVKAAGGKVAGSVKHPLSATDFSSFLVQAQSSGAKVIGLANAGGD LINAIKQASEFGITQGGQSLAGLLIFSSDVKAMGLTAAQGLLLTEAFYWDLNDDTRAFSKRFAEKFGGKMPTSAQAGVYS SALHYLNAIKDAKTKDAPKVMEQMRATPIDDPLFGKGEVRIDGRATHPMYLFKVKKPADSKGPWDLYEVVATIPANDAFR PLKDGGCPLVK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 43351; Mature: 43219
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRRSLDPRALFHPRPLLVAAALCGLMAGAARAEDTTVKLGVLNDMSGVYADISGPGSV CCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEECCCCCHH VAAQMAAQDFMAKNKGFKVEVVGADHQNKPDVGSSIARKWYDQDGVDAIMDVTTSSVALA HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEEE VNDVTREKNKIFLVSGGGTSDLTGAKCSPNTVHWTYDTWALANGTGSAITKQGGSPWFFI EEHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCEECCCCCCEEEE TADYAFGAALERDAAAAVKAAGGKVAGSVKHPLSATDFSSFLVQAQSSGAKVIGLANAGG EECCHHCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCH DLINAIKQASEFGITQGGQSLAGLLIFSSDVKAMGLTAAQGLLLTEAFYWDLNDDTRAFS HHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCHHHHHHHHHEEEEEEEEEECCCHHHHHH KRFAEKFGGKMPTSAQAGVYSSALHYLNAIKDAKTKDAPKVMEQMRATPIDDPLFGKGEV HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEE RIDGRATHPMYLFKVKKPADSKGPWDLYEVVATIPANDAFRPLKDGGCPLVK EECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSRRSLDPRALFHPRPLLVAAALCGLMAGAARAEDTTVKLGVLNDMSGVYADISGPGSV CCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEECCCCCHH VAAQMAAQDFMAKNKGFKVEVVGADHQNKPDVGSSIARKWYDQDGVDAIMDVTTSSVALA HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEEE VNDVTREKNKIFLVSGGGTSDLTGAKCSPNTVHWTYDTWALANGTGSAITKQGGSPWFFI EEHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCEECCCCCCEEEE TADYAFGAALERDAAAAVKAAGGKVAGSVKHPLSATDFSSFLVQAQSSGAKVIGLANAGG EECCHHCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCH DLINAIKQASEFGITQGGQSLAGLLIFSSDVKAMGLTAAQGLLLTEAFYWDLNDDTRAFS HHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCHHHHHHHHHEEEEEEEEEECCCHHHHHH KRFAEKFGGKMPTSAQAGVYSSALHYLNAIKDAKTKDAPKVMEQMRATPIDDPLFGKGEV HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEE RIDGRATHPMYLFKVKKPADSKGPWDLYEVVATIPANDAFRPLKDGGCPLVK EECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA