| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is dehH1 [H]
Identifier: 154247137
GI number: 154247137
Start: 3556495
End: 3557247
Strand: Reverse
Name: dehH1 [H]
Synonym: Xaut_3209
Alternate gene names: 154247137
Gene position: 3557247-3556495 (Counterclockwise)
Preceding gene: 154247138
Following gene: 154247136
Centisome position: 67.0
GC content: 67.86
Gene sequence:
>753_bases ATGCCCCATTTCTCTTCCGCAGGCGTCGATATCGCCTATTTCGACATCGGCGCCGGCGATCCGGTCCTCCTGATCCACGG CTTCGCCTCCTCCAAGGAGATCAACTGGGTCGGCCCATCCTGGACGAAAACCCTCACCGAGGCCGGCTACCGCGCCATCG GCTTCGACCATCGCGGCCACGGCTTGTCGGAAAAGCTGTACGATCCCGCCCTCTACGATACCCGCATCATGGCGGAGGAT GCCCAGCGCCTGCTTGCCCATCTCGGGCTGGAGCGGGCCGACGTGGTGGGCTATTCCATGGGCGCGCGGGTGGGGGCGCA GATGGCGCTGCATTTCCCGCAGGCGGTGCGCTCGCTGATCCTGGGCGGGCTGGGCATCCATCTGGTGGACGGGGTGGGCC TGCCCCAGACGGTCGCCGATGCGTTGGAGGCGCCGAGCCTCGAGGATGTCGCCGATCCCATGGGCCGCATGTTCCGCGCC TTCGCCGACGCCAACAAGGCGGACCTGAAGGCGCTCGCCGCCTGCATCCGCGGCTCGCGCCAGGTGCTTACCCGCGAGGA GGTGGGGCGCATCTTCCAGCCGGTGCTGGTGGCCATCGGCACCCGCGACCTCGTCTCCGGACCCGGCCAGCCTCTGGTGG ATCTGCTGCCGGACGGTACCATGCTGGATATCCCTAACCGCGACCACAACCCCGCCGTGGGCGACAAGGTGTTCAAGGCC GGCGCTCTCGAATTCCTGAAACGCCGGCCCTGA
Upstream 100 bases:
>100_bases CTGAAGACTTGGCACAACGGGAGCGAGCTTCTAGTTTCCCGCCCCGTCATACGCCGAGATCCGAGGCGCCCGCCGTGGCG GTGCCCCGCGAAGGTTCCCC
Downstream 100 bases:
>100_bases AGCGACCGATGGGGAACCTCTCCCCTTCCCGCCGCTTGTGCTAGAACAGGCGCCAAGTTGCATCGTCGAGGAGGCAGGAA TGCCCCAATCTCCCACGCCT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MPHFSSAGVDIAYFDIGAGDPVLLIHGFASSKEINWVGPSWTKTLTEAGYRAIGFDHRGHGLSEKLYDPALYDTRIMAED AQRLLAHLGLERADVVGYSMGARVGAQMALHFPQAVRSLILGGLGIHLVDGVGLPQTVADALEAPSLEDVADPMGRMFRA FADANKADLKALAACIRGSRQVLTREEVGRIFQPVLVAIGTRDLVSGPGQPLVDLLPDGTMLDIPNRDHNPAVGDKVFKA GALEFLKRRP
Sequences:
>Translated_250_residues MPHFSSAGVDIAYFDIGAGDPVLLIHGFASSKEINWVGPSWTKTLTEAGYRAIGFDHRGHGLSEKLYDPALYDTRIMAED AQRLLAHLGLERADVVGYSMGARVGAQMALHFPQAVRSLILGGLGIHLVDGVGLPQTVADALEAPSLEDVADPMGRMFRA FADANKADLKALAACIRGSRQVLTREEVGRIFQPVLVAIGTRDLVSGPGQPLVDLLPDGTMLDIPNRDHNPAVGDKVFKA GALEFLKRRP >Mature_249_residues PHFSSAGVDIAYFDIGAGDPVLLIHGFASSKEINWVGPSWTKTLTEAGYRAIGFDHRGHGLSEKLYDPALYDTRIMAEDA QRLLAHLGLERADVVGYSMGARVGAQMALHFPQAVRSLILGGLGIHLVDGVGLPQTVADALEAPSLEDVADPMGRMFRAF ADANKADLKALAACIRGSRQVLTREEVGRIFQPVLVAIGTRDLVSGPGQPLVDLLPDGTMLDIPNRDHNPAVGDKVFKAG ALEFLKRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.3 [H]
Molecular weight: Translated: 26843; Mature: 26712
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHFSSAGVDIAYFDIGAGDPVLLIHGFASSKEINWVGPSWTKTLTEAGYRAIGFDHRGH CCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCC GLSEKLYDPALYDTRIMAEDAQRLLAHLGLERADVVGYSMGARVGAQMALHFPQAVRSLI CCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGLGIHLVDGVGLPQTVADALEAPSLEDVADPMGRMFRAFADANKADLKALAACIRGSR HCCCHHHEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCH QVLTREEVGRIFQPVLVAIGTRDLVSGPGQPLVDLLPDGTMLDIPNRDHNPAVGDKVFKA HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHCCCCCEEECCCCCCCCCHHHHHHHH GALEFLKRRP HHHHHHHCCC >Mature Secondary Structure PHFSSAGVDIAYFDIGAGDPVLLIHGFASSKEINWVGPSWTKTLTEAGYRAIGFDHRGH CCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCC GLSEKLYDPALYDTRIMAEDAQRLLAHLGLERADVVGYSMGARVGAQMALHFPQAVRSLI CCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGLGIHLVDGVGLPQTVADALEAPSLEDVADPMGRMFRAFADANKADLKALAACIRGSR HCCCHHHEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCH QVLTREEVGRIFQPVLVAIGTRDLVSGPGQPLVDLLPDGTMLDIPNRDHNPAVGDKVFKA HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHCCCCCEEECCCCCCCCCHHHHHHHH GALEFLKRRP HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1512562 [H]