| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247134
Identifier: 154247134
GI number: 154247134
Start: 3554436
End: 3554957
Strand: Direct
Name: 154247134
Synonym: Xaut_3206
Alternate gene names: NA
Gene position: 3554436-3554957 (Clockwise)
Preceding gene: 154247133
Following gene: 154247139
Centisome position: 66.95
GC content: 66.48
Gene sequence:
>522_bases ATGGAGCTGCGTCTGGCGAAGGCGATGATGACGGCCGCCCTGGCGGCCTTCTGCCTGATGGTCGCCTACGACAATCTCGC GGACTACGAGACCAATTACGCCTTCGTGCGCCATGTGCTGAGCATGGACACCACCTTTCCCGGCAATGCCCTGATGCATC GCGCCATCACCGACGAGCGGGGATGGCGCATGGCCTATGCCGCCATCATCGCAGGCGAGGCGACCAGCGGGCTGTTCCTC GCCCTCGGGGCCGTCGCCATGCTGGCGCGGCTAGGCGCACCCCCCGCCCGCTTCGAGCGCGCGAAGCGCTTCGTTTATCT GGGCGGCGCGCTGGCCTTCCTGGTCTGGTTCTTCGGCTTCATGGTGGTTGCTGGCGAGTATTTCGCCATGTGGCAGTCCA AGGACTGGAACGGACAGGCCGCGGCCTTCCGCTTCTCCATGACCGTCCTCGGAGTGCTGATCCTGGTGGCGCTGCCGGAT CGCGAGATCGCGGACACCGAGTCCCCGACGCCACCGGGCTGA
Upstream 100 bases:
>100_bases GCCCTGGAAACGCGGTGTTGACGCGTTTTCTTGACGTGAGCCGGTATTCACTTCGCCTGCCAACGCTTTAAGACTGCGTC GGGCAGAAGCGGAGGGCGGG
Downstream 100 bases:
>100_bases GCCCTTGAGGCTCAATCCACAAAGATTCAGGTTTGAAAATTCGCACAGATGGGCGCCTGCAGCCGTCGCAGGCGCTTTGC CATGGTCATGGCCGGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MELRLAKAMMTAALAAFCLMVAYDNLADYETNYAFVRHVLSMDTTFPGNALMHRAITDERGWRMAYAAIIAGEATSGLFL ALGAVAMLARLGAPPARFERAKRFVYLGGALAFLVWFFGFMVVAGEYFAMWQSKDWNGQAAAFRFSMTVLGVLILVALPD REIADTESPTPPG
Sequences:
>Translated_173_residues MELRLAKAMMTAALAAFCLMVAYDNLADYETNYAFVRHVLSMDTTFPGNALMHRAITDERGWRMAYAAIIAGEATSGLFL ALGAVAMLARLGAPPARFERAKRFVYLGGALAFLVWFFGFMVVAGEYFAMWQSKDWNGQAAAFRFSMTVLGVLILVALPD REIADTESPTPPG >Mature_173_residues MELRLAKAMMTAALAAFCLMVAYDNLADYETNYAFVRHVLSMDTTFPGNALMHRAITDERGWRMAYAAIIAGEATSGLFL ALGAVAMLARLGAPPARFERAKRFVYLGGALAFLVWFFGFMVVAGEYFAMWQSKDWNGQAAAFRFSMTVLGVLILVALPD REIADTESPTPPG
Specific function: Unknown
COG id: COG5472
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18977; Mature: 18977
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELRLAKAMMTAALAAFCLMVAYDNLADYETNYAFVRHVLSMDTTFPGNALMHRAITDER CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC GWRMAYAAIIAGEATSGLFLALGAVAMLARLGAPPARFERAKRFVYLGGALAFLVWFFGF CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEHHHHHHHHHHHHH MVVAGEYFAMWQSKDWNGQAAAFRFSMTVLGVLILVALPDREIADTESPTPPG HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MELRLAKAMMTAALAAFCLMVAYDNLADYETNYAFVRHVLSMDTTFPGNALMHRAITDER CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC GWRMAYAAIIAGEATSGLFLALGAVAMLARLGAPPARFERAKRFVYLGGALAFLVWFFGF CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEHHHHHHHHHHHHH MVVAGEYFAMWQSKDWNGQAAAFRFSMTVLGVLILVALPDREIADTESPTPPG HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA