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The map label for this gene is infA

Identifier: 154247133

GI number: 154247133

Start: 3553934

End: 3554209

Strand: Direct

Name: infA

Synonym: Xaut_3205

Alternate gene names: 154247133

Gene position: 3553934-3554209 (Clockwise)

Preceding gene: 154247132

Following gene: 154247134

Centisome position: 66.94

GC content: 64.13

Gene sequence:

>276_bases
ATGGCGAAGGAAGAACTGCTGGAGTTCGAAGGAACGGTGACCGAGGTGCTCCCGGACGGCAACTTCCGTGTGCGGCTCGA
TAACGATCATCAGATTCTGGCCTATGCGGCCGGCAAGATGAAGAAGAACCGCATCCGCACCATCGAGGGTGACCGCGTGG
TGGTGGAGATGTCCCCTTACGACCTCGATCGCGGCCGCATCAACTTCCGCCACAAGGCCGAGGGCAACGCCCCGCCGCCC
GGCGCCCGCCGCCAGCAGAATTTCCGCCGCCGCTGA

Upstream 100 bases:

>100_bases
AAATACGCCGCCGCGCGCATCTACCTATGGGCGGACGGGTGATTTCGTGAGATAAGCCCGGCAATTGCGCCCCCTCATCG
GGGCATCTGGAGACGACTAT

Downstream 100 bases:

>100_bases
GTGCGCGCCATCCGCGCTCTTGTCCCGCCGCGCGCTCCGTCCGATCTCGTCGGCGGGGAGTGTCGCGCGGGGGCCGGGGA
GTTTATGTCCGGATTGGCTC

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MAKEELLEFEGTVTEVLPDGNFRVRLDNDHQILAYAAGKMKKNRIRTIEGDRVVVEMSPYDLDRGRINFRHKAEGNAPPP
GARRQQNFRRR

Sequences:

>Translated_91_residues
MAKEELLEFEGTVTEVLPDGNFRVRLDNDHQILAYAAGKMKKNRIRTIEGDRVVVEMSPYDLDRGRINFRHKAEGNAPPP
GARRQQNFRRR
>Mature_90_residues
AKEELLEFEGTVTEVLPDGNFRVRLDNDHQILAYAAGKMKKNRIRTIEGDRVVVEMSPYDLDRGRINFRHKAEGNAPPPG
ARRQQNFRRR

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=72, Percent_Identity=54.1666666666667, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF1_AZOC5 (A8I655)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001525281.1
- ProteinModelPortal:   A8I655
- SMR:   A8I655
- GeneID:   5692482
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_2365
- HOGENOM:   HBG286099
- OMA:   VQLDAGH
- ProtClustDB:   PRK00276
- BioCyc:   ACAU438753:AZC_2365-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 10564; Mature: 10433

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEELLEFEGTVTEVLPDGNFRVRLDNDHQILAYAAGKMKKNRIRTIEGDRVVVEMSPY
CCHHHHHHCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCEEEECCCEEEEEECCC
DLDRGRINFRHKAEGNAPPPGARRQQNFRRR
CCCCCEEEEEECCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
AKEELLEFEGTVTEVLPDGNFRVRLDNDHQILAYAAGKMKKNRIRTIEGDRVVVEMSPY
CHHHHHHCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCEEEECCCEEEEEECCC
DLDRGRINFRHKAEGNAPPPGARRQQNFRRR
CCCCCEEEEEECCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA