| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247112
Identifier: 154247112
GI number: 154247112
Start: 3527882
End: 3529564
Strand: Reverse
Name: 154247112
Synonym: Xaut_3183
Alternate gene names: NA
Gene position: 3529564-3527882 (Counterclockwise)
Preceding gene: 154247113
Following gene: 154247111
Centisome position: 66.48
GC content: 66.31
Gene sequence:
>1683_bases ATGAGCATTGCAGCAACCACCGGGGCCGCCGCCCCCCCAGAGGCCGGCACACTTCAACGCAAGATCAGCTGGACCGGAGC GTTCTGGATCGCGAGCGGGGTGCCCGCGCTCGTGCTGTTCTCCATCGGCGCCATCGGCGCCACGGTGGGCGCGCCGGCCT GGTTCGTGTGGATCCTGTCCATCATCTTCGGCTTCATCCAGGCCTTCTCCTATGCGGAGATCGCCGGCCTGTTCCCGCAC AAGTCGGGTGGCGCCTCGGTCTATGGCGCCATCGCCTGGGTGCGCTACGGCAAGCTGCTCGCACCCTTCTCGGTATGGTG CAACTGGCTGGCCTGGTCGCCGGTTCTGTCCATCGGCTCCGGCCTCGCGGCGGGCTATGTGCTGTCCATCCTGTTCCCGG CAGATGCCGCCATCAACACCTGGCAGCTCACCCTCGTGGATCTCGGCTGGCTGAAGACGGGCCTTGCCCTGCGCCTCAAC GCCACCTTCTTCCTCGGCGCCGCGCTGCTGCTCGTCGCCTTCGCCATCCAGCACCGCGGCATCAGCCAGACCGCGCGGGT GCAGGTGATCCTGGGCGTGGTGGCGCTGCTGCCGCTGGTGCTCATCGGCGTCGTGCCCCTCATCACCGGCGACGTGCTGG CGGCCCATCTCGGCCCGTTCGCGCCGCTCGCCAAGGACGAGGCGGGCAAGGTCATCGCCGGGTCGTGGGACATGGCCGGC ATCACCCTCATGGCCGGCGGCCTGTTCATCGCCGCCTGGTCCACCTACGGCTTCGAGACCGCAGTCTGCTACACGCGCGA GTTCAAGGACCCCAAGACCGACACCTTCAAGGCCATCCTCTATTCGGGCCTCCTGTGCATCTTCGTCTTCACCATCGTGC CCATCTCGTTCCAGGGCGTGCTCGGCCTCGGCCAGCTGGTGACGCCGGCGGTGGTGGACGCCTCCGGCACGGTGACGACG CCTGCGGTCTATGACGGCATCCTGTCCGCCGACATCTATTCCGGCATGGGCGTCGCCAGCGCCATGGCGGACATGATCAA GGGCGGGCCCATCGTCCACCATGTCATCGTGGTGATGCTGATCCTCGCCCTCATGCTTGCCATCATCACCTCCATGGCAG GCTCCTCGCGCACCCTCTACCAGGCGTCCGTGGATGGCTGGCTGCCCAAGTACCTCAGCCACGTGAACGAGAATGGCGCG CCCACCAAGGCCATGTGGACCGACCTCGGCTTCAACCTCATCCTGCTGATGATGTCGGACTACGTGTTCATCCTCGCCAT CTCCAACGTCTGCTACATCCTGTTCAACTTCCTCAACCTCAACGCCGCCTGGATGCACCGCATCGACCGGCCGAACTGGG AACGCCCGTTCAAGGCGCCCACCTGGCTCATCGCCATGGGCACGGTGCTGGCCTACGTGAACCTGTTCCTGCTCGGCATG GGCGCGGACATCTGGGGTGCCGGCACGCTGGTGACGGGGCTCGTGGTCTCGGCCGCCATCATCCCGGTCTTCCTGTTCCG CCATTATGTGACGGACAAGGGTCAGTTCCCGGCGGCGATGATGGAGGACATGCACCTGAAATCCGAAACCGGCGCCGGCA CCAGGGCGGGCCTCCTGCCCTACCTCGCCCTCGCCTTGGGTGCCGGTGTGATCATCGTGGCGCGCACCCTCGCGGTCTAC TGA
Upstream 100 bases:
>100_bases CAAAAAACCACTCAAACTAACCTTGCGTCATCCGCACATCTTGATTGACAAATTTTTTTCTTGCCGAGAAACTCCCTCGC ATAAAAATGAGGGGAACCAC
Downstream 100 bases:
>100_bases GCGGAGACAAGATGAGCGATCAAGGCATCAAGAGCCGGCCCAAGTACCAGCCGATCGCGCCGGATCCGCAGGGCCGGCAC CATCTGCTGGTCGTGGACGG
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: Amino Acid Transporter; Amino Acid Permease; Amino Acid Transporter Permease Protein; Amino Acid Permease Superfamily; Multi-Sensor Hybrid Histidine Kinase; Amino Acid Transporter-Like Protein; Dimethylamine Permease; Amino Acid Permease-Like Protein
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MSIAATTGAAAPPEAGTLQRKISWTGAFWIASGVPALVLFSIGAIGATVGAPAWFVWILSIIFGFIQAFSYAEIAGLFPH KSGGASVYGAIAWVRYGKLLAPFSVWCNWLAWSPVLSIGSGLAAGYVLSILFPADAAINTWQLTLVDLGWLKTGLALRLN ATFFLGAALLLVAFAIQHRGISQTARVQVILGVVALLPLVLIGVVPLITGDVLAAHLGPFAPLAKDEAGKVIAGSWDMAG ITLMAGGLFIAAWSTYGFETAVCYTREFKDPKTDTFKAILYSGLLCIFVFTIVPISFQGVLGLGQLVTPAVVDASGTVTT PAVYDGILSADIYSGMGVASAMADMIKGGPIVHHVIVVMLILALMLAIITSMAGSSRTLYQASVDGWLPKYLSHVNENGA PTKAMWTDLGFNLILLMMSDYVFILAISNVCYILFNFLNLNAAWMHRIDRPNWERPFKAPTWLIAMGTVLAYVNLFLLGM GADIWGAGTLVTGLVVSAAIIPVFLFRHYVTDKGQFPAAMMEDMHLKSETGAGTRAGLLPYLALALGAGVIIVARTLAVY
Sequences:
>Translated_560_residues MSIAATTGAAAPPEAGTLQRKISWTGAFWIASGVPALVLFSIGAIGATVGAPAWFVWILSIIFGFIQAFSYAEIAGLFPH KSGGASVYGAIAWVRYGKLLAPFSVWCNWLAWSPVLSIGSGLAAGYVLSILFPADAAINTWQLTLVDLGWLKTGLALRLN ATFFLGAALLLVAFAIQHRGISQTARVQVILGVVALLPLVLIGVVPLITGDVLAAHLGPFAPLAKDEAGKVIAGSWDMAG ITLMAGGLFIAAWSTYGFETAVCYTREFKDPKTDTFKAILYSGLLCIFVFTIVPISFQGVLGLGQLVTPAVVDASGTVTT PAVYDGILSADIYSGMGVASAMADMIKGGPIVHHVIVVMLILALMLAIITSMAGSSRTLYQASVDGWLPKYLSHVNENGA PTKAMWTDLGFNLILLMMSDYVFILAISNVCYILFNFLNLNAAWMHRIDRPNWERPFKAPTWLIAMGTVLAYVNLFLLGM GADIWGAGTLVTGLVVSAAIIPVFLFRHYVTDKGQFPAAMMEDMHLKSETGAGTRAGLLPYLALALGAGVIIVARTLAVY >Mature_559_residues SIAATTGAAAPPEAGTLQRKISWTGAFWIASGVPALVLFSIGAIGATVGAPAWFVWILSIIFGFIQAFSYAEIAGLFPHK SGGASVYGAIAWVRYGKLLAPFSVWCNWLAWSPVLSIGSGLAAGYVLSILFPADAAINTWQLTLVDLGWLKTGLALRLNA TFFLGAALLLVAFAIQHRGISQTARVQVILGVVALLPLVLIGVVPLITGDVLAAHLGPFAPLAKDEAGKVIAGSWDMAGI TLMAGGLFIAAWSTYGFETAVCYTREFKDPKTDTFKAILYSGLLCIFVFTIVPISFQGVLGLGQLVTPAVVDASGTVTTP AVYDGILSADIYSGMGVASAMADMIKGGPIVHHVIVVMLILALMLAIITSMAGSSRTLYQASVDGWLPKYLSHVNENGAP TKAMWTDLGFNLILLMMSDYVFILAISNVCYILFNFLNLNAAWMHRIDRPNWERPFKAPTWLIAMGTVLAYVNLFLLGMG ADIWGAGTLVTGLVVSAAIIPVFLFRHYVTDKGQFPAAMMEDMHLKSETGAGTRAGLLPYLALALGAGVIIVARTLAVY
Specific function: Unknown
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI21357367, Length=463, Percent_Identity=22.4622030237581, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59447; Mature: 59316
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: PS01323 PHOSPHOTRIESTERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAATTGAAAPPEAGTLQRKISWTGAFWIASGVPALVLFSIGAIGATVGAPAWFVWILS CCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHH IIFGFIQAFSYAEIAGLFPHKSGGASVYGAIAWVRYGKLLAPFSVWCNWLAWSPVLSIGS HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC GLAAGYVLSILFPADAAINTWQLTLVDLGWLKTGLALRLNATFFLGAALLLVAFAIQHRG CHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCC ISQTARVQVILGVVALLPLVLIGVVPLITGDVLAAHLGPFAPLAKDEAGKVIAGSWDMAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCC ITLMAGGLFIAAWSTYGFETAVCYTREFKDPKTDTFKAILYSGLLCIFVFTIVPISFQGV HHHHHCCHHEEEHHHCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHH LGLGQLVTPAVVDASGTVTTPAVYDGILSADIYSGMGVASAMADMIKGGPIVHHVIVVML HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHH ILALMLAIITSMAGSSRTLYQASVDGWLPKYLSHVNENGAPTKAMWTDLGFNLILLMMSD HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH YVFILAISNVCYILFNFLNLNAAWMHRIDRPNWERPFKAPTWLIAMGTVLAYVNLFLLGM HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GADIWGAGTLVTGLVVSAAIIPVFLFRHYVTDKGQFPAAMMEDMHLKSETGAGTRAGLLP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHH YLALALGAGVIIVARTLAVY HHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure SIAATTGAAAPPEAGTLQRKISWTGAFWIASGVPALVLFSIGAIGATVGAPAWFVWILS CCCCCCCCCCCCCCCCHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHH IIFGFIQAFSYAEIAGLFPHKSGGASVYGAIAWVRYGKLLAPFSVWCNWLAWSPVLSIGS HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC GLAAGYVLSILFPADAAINTWQLTLVDLGWLKTGLALRLNATFFLGAALLLVAFAIQHRG CHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCC ISQTARVQVILGVVALLPLVLIGVVPLITGDVLAAHLGPFAPLAKDEAGKVIAGSWDMAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCC ITLMAGGLFIAAWSTYGFETAVCYTREFKDPKTDTFKAILYSGLLCIFVFTIVPISFQGV HHHHHCCHHEEEHHHCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHH LGLGQLVTPAVVDASGTVTTPAVYDGILSADIYSGMGVASAMADMIKGGPIVHHVIVVML HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHH ILALMLAIITSMAGSSRTLYQASVDGWLPKYLSHVNENGAPTKAMWTDLGFNLILLMMSD HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH YVFILAISNVCYILFNFLNLNAAWMHRIDRPNWERPFKAPTWLIAMGTVLAYVNLFLLGM HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GADIWGAGTLVTGLVVSAAIIPVFLFRHYVTDKGQFPAAMMEDMHLKSETGAGTRAGLLP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHH YLALALGAGVIIVARTLAVY HHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA