| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247093
Identifier: 154247093
GI number: 154247093
Start: 3508699
End: 3509271
Strand: Direct
Name: 154247093
Synonym: Xaut_3164
Alternate gene names: NA
Gene position: 3508699-3509271 (Clockwise)
Preceding gene: 154247092
Following gene: 154247097
Centisome position: 66.09
GC content: 72.25
Gene sequence:
>573_bases ATGACCGAGACCGTCGATATCGCCATCGAGGTGGACACCCGCAACGCCAAGGCGGCGCTGGGGGACGTGGAGGTGTCGGC GAAGGGTTTTGCCTCGGCGCTGGCCTCCGCCTTCACCGGCATCGCCGTGCAGGGCAAGGACCTCGGCAGCGTGCTGGAGC AACTGGCCGCGCGGCTTTCCAATCTCGCCCTCACGGCGGCCTTGAAGCCGCTGGAAAGCGGGCTCTCCTCGCTGCTGTCG GGCTCGGCCGGCGGGCTCGGCTTCGCCCAGGGCGGGGTGATCTCGGAGGGACGGGTGATGCCGTTCGCGCGCGGCGGGGT GGTGGCGGCACCCACCTATTTTCCGCTTGGCGGTTCCAGCCTCGGCCTCATGGGCGAGAAGGGGGCGGAGGCCATCCTGC CTTTGGCGCGCGGCGCCGATGGCAGGCTCGGCGTGCGCTCGGCCGAAGGGGCGGGACGCGCGGCGGTGACGGTGAATGTT TCCACGCCGGACGTCGCCGGCTTCCGCCGTTCGGAGGCCTATCTGTCGGGCCTTGTGGCGCGGGCGGTGGCGCGCGGCCA GCGCGGGGCGTGA
Upstream 100 bases:
>100_bases CGCCGTCTCGGCCCTGCTGCCACCCGCGCCGGACCACCTGTCGCGCCCCGATCTTTCCGCGCTGATGAAGCGCTTCCCCG ATCCGTCCTGAGGTTCTGCC
Downstream 100 bases:
>100_bases GGGGAGGGGATATACTCTTTCCTAAACTTCAGCGCGCGCTCTTCCACGGATCGACGGTCTCGGTGGTGGTGGTGCCGCTG CCCGACGGGGTGCCGCCGAA
Product: gene transfer agent (GTA) orfg11
Products: NA
Alternate protein names: Tail Tape Measure Protein; Gene Transfer Agent Like Protein; Phage Tail Minor Protein; Phage-Related Minor Tail Protein-Like; PHage Minor Tail Protein H; Phage-Related Minor Tail Protein-Like Protein; Gene Transfer Agent Protein
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MTETVDIAIEVDTRNAKAALGDVEVSAKGFASALASAFTGIAVQGKDLGSVLEQLAARLSNLALTAALKPLESGLSSLLS GSAGGLGFAQGGVISEGRVMPFARGGVVAAPTYFPLGGSSLGLMGEKGAEAILPLARGADGRLGVRSAEGAGRAAVTVNV STPDVAGFRRSEAYLSGLVARAVARGQRGA
Sequences:
>Translated_190_residues MTETVDIAIEVDTRNAKAALGDVEVSAKGFASALASAFTGIAVQGKDLGSVLEQLAARLSNLALTAALKPLESGLSSLLS GSAGGLGFAQGGVISEGRVMPFARGGVVAAPTYFPLGGSSLGLMGEKGAEAILPLARGADGRLGVRSAEGAGRAAVTVNV STPDVAGFRRSEAYLSGLVARAVARGQRGA >Mature_189_residues TETVDIAIEVDTRNAKAALGDVEVSAKGFASALASAFTGIAVQGKDLGSVLEQLAARLSNLALTAALKPLESGLSSLLSG SAGGLGFAQGGVISEGRVMPFARGGVVAAPTYFPLGGSSLGLMGEKGAEAILPLARGADGRLGVRSAEGAGRAAVTVNVS TPDVAGFRRSEAYLSGLVARAVARGQRGA
Specific function: Unknown
COG id: COG5281
COG function: function code S; Phage-related minor tail protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18813; Mature: 18681
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETVDIAIEVDTRNAKAALGDVEVSAKGFASALASAFTGIAVQGKDLGSVLEQLAARLS CCCEEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHH NLALTAALKPLESGLSSLLSGSAGGLGFAQGGVISEGRVMPFARGGVVAAPTYFPLGGSS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECEEECCCEEECCEECCCCCCC LGLMGEKGAEAILPLARGADGRLGVRSAEGAGRAAVTVNVSTPDVAGFRRSEAYLSGLVA CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH RAVARGQRGA HHHHCCCCCC >Mature Secondary Structure TETVDIAIEVDTRNAKAALGDVEVSAKGFASALASAFTGIAVQGKDLGSVLEQLAARLS CCEEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHH NLALTAALKPLESGLSSLLSGSAGGLGFAQGGVISEGRVMPFARGGVVAAPTYFPLGGSS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECEEECCCEEECCEECCCCCCC LGLMGEKGAEAILPLARGADGRLGVRSAEGAGRAAVTVNVSTPDVAGFRRSEAYLSGLVA CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH RAVARGQRGA HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA