| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247090
Identifier: 154247090
GI number: 154247090
Start: 3507688
End: 3508095
Strand: Direct
Name: 154247090
Synonym: Xaut_3161
Alternate gene names: NA
Gene position: 3507688-3508095 (Clockwise)
Preceding gene: 154247089
Following gene: 154247091
Centisome position: 66.07
GC content: 69.36
Gene sequence:
>408_bases ATGGCCGCGCAGAAGGGCAAGGACCTGCTTTTGAAGATGCATGACGGCACCCAGTTCACCACCGTGGCGGGGCTGCGCTC GCGCACCCTCGCCTTCAACGCCCAGAGCGTGGACGTGACCCACTCCGAGAGCGCCGGGCGCTGGCGCGAGCTGCTGGACG GGGCGGGGGTGAAGCGGGCGTCGGTCTCCGGCTCCGGCGTGTTCAAGGATGCCGCCTCCGACGCGCTGGTGCGGCAGACC TTCTTCTCCGGCGCGCTGGCCTCCTGCCAGGTGGTGATCCCGGATTTCGGCACCATCACCGGGCCGTTCCAGATCACCGC GCTGGAGATCGCCGCCGAGCACGACCGCGAGGTCACCTTCGACCTGACGCTGGAAAGCGCCGGGGAGCTCGCCTTCGCGG CATTGTGA
Upstream 100 bases:
>100_bases CGCCGCGAGAGTGACGGGCGCACCTTCCATGCTCTGGTGCGGTTTCGCGCCGTCACCGAGCCCCTTTGATTTCGAGCCCC TTTGATTTTCGGAGAAGACG
Downstream 100 bases:
>100_bases GGCGAGCGCCTTCGAGAAAGGACATCCCATGCCCAATGCCCGACGCGGCGAGATCGCGGCCGTGCTCGATGGACGCGTGC GCGTCCTGGTGCTCACCCTC
Product: TP901-1 family phage major tail protein
Products: NA
Alternate protein names: Phage Tail Protein -1 Family; Gene Transfer Agent Orf; Phage Protein; Tail Protein
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAAQKGKDLLLKMHDGTQFTTVAGLRSRTLAFNAQSVDVTHSESAGRWRELLDGAGVKRASVSGSGVFKDAASDALVRQT FFSGALASCQVVIPDFGTITGPFQITALEIAAEHDREVTFDLTLESAGELAFAAL
Sequences:
>Translated_135_residues MAAQKGKDLLLKMHDGTQFTTVAGLRSRTLAFNAQSVDVTHSESAGRWRELLDGAGVKRASVSGSGVFKDAASDALVRQT FFSGALASCQVVIPDFGTITGPFQITALEIAAEHDREVTFDLTLESAGELAFAAL >Mature_134_residues AAQKGKDLLLKMHDGTQFTTVAGLRSRTLAFNAQSVDVTHSESAGRWRELLDGAGVKRASVSGSGVFKDAASDALVRQTF FSGALASCQVVIPDFGTITGPFQITALEIAAEHDREVTFDLTLESAGELAFAAL
Specific function: Unknown
COG id: COG5437
COG function: function code S; Predicted secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14261; Mature: 14130
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQKGKDLLLKMHDGTQFTTVAGLRSRTLAFNAQSVDVTHSESAGRWRELLDGAGVKRA CCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCEEEEECCCCCHHHHHHHCCCCCEEE SVSGSGVFKDAASDALVRQTFFSGALASCQVVIPDFGTITGPFQITALEIAAEHDREVTF ECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCEEEE DLTLESAGELAFAAL EEEECCCCCEEEEEC >Mature Secondary Structure AAQKGKDLLLKMHDGTQFTTVAGLRSRTLAFNAQSVDVTHSESAGRWRELLDGAGVKRA CCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCEEEEECCCCCHHHHHHHCCCCCEEE SVSGSGVFKDAASDALVRQTFFSGALASCQVVIPDFGTITGPFQITALEIAAEHDREVTF ECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCEEEE DLTLESAGELAFAAL EEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA