| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247083
Identifier: 154247083
GI number: 154247083
Start: 3502015
End: 3502494
Strand: Direct
Name: 154247083
Synonym: Xaut_3154
Alternate gene names: NA
Gene position: 3502015-3502494 (Clockwise)
Preceding gene: 154247082
Following gene: 154247084
Centisome position: 65.96
GC content: 74.58
Gene sequence:
>480_bases ATGGCGGACGGCTTTCCCATCGAGGGCTATGCCTGCCTGTTCGACGTGGCGGACCTCGGCCGCGACCTGGTGCTGCCCGG CGCCTTCGCAGCGAGCCTTGCCCGGCAGGGCGCGGGCGGCGTGCGCCTCCTCTACCAGCACGATCCGGCCGAGCCCATCG GAGTGTGGACCGAGGCATTCGAGGACACGCGCGGCCTTTATGTGCGCGGCCGCCTCTCTCCCGACGTGGTGCGCGCCCGT GAATGCGCGGCGCTGATCGCAGAGGGCGCGCTCGACGGCCTCTCCATCGGCTTCAAGGCGGTGGAGGCGCGGACCGATCC GCGCACCCGCCTGCGCCGGCTGTCGCGCATCGACCTGTGGGAGGTGTCCATCGTCACCTTCCCCATGCAGCCGGGGGCGC GCATCGCCCGCCCGCCGGCCGCCCCCGCGGCCCTGCTGTCCGCCGCCGCGGCCCGCCTGCGCGCGGGCTCCCGCATCTGA
Upstream 100 bases:
>100_bases CGGCACCGTGTTCCGCGAGTTCGTCGCCACCCTGGAGCGGCTGGAGAAGAGCCGGCGCCGCAAGAAGGCCCCGGCCGCCC CCACCGAGCGGAGCTGAGCC
Downstream 100 bases:
>100_bases TTTTCGTTCACCGCAAAAGAGGCTTTCATGTCCCATCCCGACACCGCCCGCACCATCGCTGGCGCGCCTGAGACCAAGGT GGCCGGCGCCGAGGCCACTT
Product: HK97 family phage prohead protease
Products: NA
Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Head Maturation Protease; Phage Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Protease; Phage Pro-Head Protease
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MADGFPIEGYACLFDVADLGRDLVLPGAFAASLARQGAGGVRLLYQHDPAEPIGVWTEAFEDTRGLYVRGRLSPDVVRAR ECAALIAEGALDGLSIGFKAVEARTDPRTRLRRLSRIDLWEVSIVTFPMQPGARIARPPAAPAALLSAAAARLRAGSRI
Sequences:
>Translated_159_residues MADGFPIEGYACLFDVADLGRDLVLPGAFAASLARQGAGGVRLLYQHDPAEPIGVWTEAFEDTRGLYVRGRLSPDVVRAR ECAALIAEGALDGLSIGFKAVEARTDPRTRLRRLSRIDLWEVSIVTFPMQPGARIARPPAAPAALLSAAAARLRAGSRI >Mature_158_residues ADGFPIEGYACLFDVADLGRDLVLPGAFAASLARQGAGGVRLLYQHDPAEPIGVWTEAFEDTRGLYVRGRLSPDVVRARE CAALIAEGALDGLSIGFKAVEARTDPRTRLRRLSRIDLWEVSIVTFPMQPGARIARPPAAPAALLSAAAARLRAGSRI
Specific function: Unknown
COG id: COG3740
COG function: function code R; Phage head maturation protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16996; Mature: 16865
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGFPIEGYACLFDVADLGRDLVLPGAFAASLARQGAGGVRLLYQHDPAEPIGVWTEAF CCCCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH EDTRGLYVRGRLSPDVVRARECAALIAEGALDGLSIGFKAVEARTDPRTRLRRLSRIDLW HCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHCHHHECCCCCHHHHHHHHHCCCEE EVSIVTFPMQPGARIARPPAAPAALLSAAAARLRAGSRI EEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADGFPIEGYACLFDVADLGRDLVLPGAFAASLARQGAGGVRLLYQHDPAEPIGVWTEAF CCCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH EDTRGLYVRGRLSPDVVRARECAALIAEGALDGLSIGFKAVEARTDPRTRLRRLSRIDLW HCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHCHHHECCCCCHHHHHHHHHCCCEE EVSIVTFPMQPGARIARPPAAPAALLSAAAARLRAGSRI EEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA