| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is gmk
Identifier: 154247065
GI number: 154247065
Start: 3479034
End: 3479729
Strand: Direct
Name: gmk
Synonym: Xaut_3136
Alternate gene names: 154247065
Gene position: 3479034-3479729 (Clockwise)
Preceding gene: 154247064
Following gene: 154247066
Centisome position: 65.53
GC content: 67.24
Gene sequence:
>696_bases ATGCCGCAATCCGCCTCTTCCTCCGTGTCGTCGCACTTCGCGCTGCCGGGCTGGAAGCCGGGCGCGGGTATCCTCGCGCG GCGCGGGCTGATGCTGGTGCTGTCCTCGCCATCGGGCGCAGGCAAGACCACCCTGTCGCGCAAGCTGCTGGCGAGCGACG ATCGAATCACCATGTCCGTGTCCGTCACCACGCGGCCGCCCCGGCCGGGCGAGGTGGAGGGCAAGGACTATTATTTCGTG GACGTGCCCACCTTCCACCGCATGCGGGACGAGGGCGAACTGCTGGAGCACGCGGTGGTGTTCGACAATCTCTACGGCAC GCCGCGCCCCGCCGTGGAACTGGCCCTATCCGCCGGCCGGGACGTGCTGTTCGACATCGACTGGCAGGGCACCCAGCAGT TGGGCGAGACCGCCCAGCAGGACCTGGTGAAAGTCTTCCTGTTGCCGCCCACCGCCGCGGACCTTGAGCAGCGCCTGCGC TCCCGCGCTCAGGATTCGGAAGAGGTGGTGCACCAGCGCATGGCCAAGGCCTCCGACGAGATCAGCCACTATACCGAATA CGACTACATCATCATCAACCACGAGGTGGACGACAGCCTCGTCAAGCTCACCGCCATCCTGCAGGCGGAACGGCTGAAGC GCCGGCGCCTGACCGGCCTGTCGAGCTTCGTGAAGGGCCTGCGCGACGCCCTGTGA
Upstream 100 bases:
>100_bases AGTCCAATTCCGTGGCGCTGACGCAGATCGGGCTTGACCTGAAGCTGCTGGTGGACCAGTTCCGCGAGCAGATCCAGAAC CTCGAGTGAAGCCCGAACCC
Downstream 100 bases:
>100_bases GGCGTTCCATCGCGAGATGCCCGCCTGTCCGCGACAGGCCGTCGCGCCTGCGCCAATTCCCGCACACATTTGAGCAACGA ACGCCCCGTGCCCGGCAGCC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPQSASSSVSSHFALPGWKPGAGILARRGLMLVLSSPSGAGKTTLSRKLLASDDRITMSVSVTTRPPRPGEVEGKDYYFV DVPTFHRMRDEGELLEHAVVFDNLYGTPRPAVELALSAGRDVLFDIDWQGTQQLGETAQQDLVKVFLLPPTAADLEQRLR SRAQDSEEVVHQRMAKASDEISHYTEYDYIIINHEVDDSLVKLTAILQAERLKRRRLTGLSSFVKGLRDAL
Sequences:
>Translated_231_residues MPQSASSSVSSHFALPGWKPGAGILARRGLMLVLSSPSGAGKTTLSRKLLASDDRITMSVSVTTRPPRPGEVEGKDYYFV DVPTFHRMRDEGELLEHAVVFDNLYGTPRPAVELALSAGRDVLFDIDWQGTQQLGETAQQDLVKVFLLPPTAADLEQRLR SRAQDSEEVVHQRMAKASDEISHYTEYDYIIINHEVDDSLVKLTAILQAERLKRRRLTGLSSFVKGLRDAL >Mature_230_residues PQSASSSVSSHFALPGWKPGAGILARRGLMLVLSSPSGAGKTTLSRKLLASDDRITMSVSVTTRPPRPGEVEGKDYYFVD VPTFHRMRDEGELLEHAVVFDNLYGTPRPAVELALSAGRDVLFDIDWQGTQQLGETAQQDLVKVFLLPPTAADLEQRLRS RAQDSEEVVHQRMAKASDEISHYTEYDYIIINHEVDDSLVKLTAILQAERLKRRRLTGLSSFVKGLRDAL
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=194, Percent_Identity=40.2061855670103, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI4504221, Length=194, Percent_Identity=40.2061855670103, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI226874831, Length=194, Percent_Identity=40.2061855670103, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI262118259, Length=173, Percent_Identity=29.4797687861272, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI262118255, Length=173, Percent_Identity=29.4797687861272, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI4505237, Length=173, Percent_Identity=29.4797687861272, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI262118263, Length=173, Percent_Identity=29.4797687861272, Blast_Score=71, Evalue=6e-13, Organism=Homo sapiens, GI38570142, Length=192, Percent_Identity=25.5208333333333, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790080, Length=191, Percent_Identity=48.1675392670157, Blast_Score=182, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17508835, Length=198, Percent_Identity=31.3131313131313, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI193203132, Length=182, Percent_Identity=32.4175824175824, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI71984092, Length=183, Percent_Identity=27.3224043715847, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6320662, Length=184, Percent_Identity=36.9565217391304, Blast_Score=125, Evalue=7e-30, Organism=Drosophila melanogaster, GI21356141, Length=194, Percent_Identity=34.5360824742268, Blast_Score=102, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 25646; Mature: 25515
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSASSSVSSHFALPGWKPGAGILARRGLMLVLSSPSGAGKTTLSRKLLASDDRITMSV CCCCCCCHHHHCCCCCCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEE SVTTRPPRPGEVEGKDYYFVDVPTFHRMRDEGELLEHAVVFDNLYGTPRPAVELALSAGR EEEECCCCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC DVLFDIDWQGTQQLGETAQQDLVKVFLLPPTAADLEQRLRSRAQDSEEVVHQRMAKASDE EEEEEECCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ISHYTEYDYIIINHEVDDSLVKLTAILQAERLKRRRLTGLSSFVKGLRDAL HHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PQSASSSVSSHFALPGWKPGAGILARRGLMLVLSSPSGAGKTTLSRKLLASDDRITMSV CCCCCCHHHHCCCCCCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEE SVTTRPPRPGEVEGKDYYFVDVPTFHRMRDEGELLEHAVVFDNLYGTPRPAVELALSAGR EEEECCCCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC DVLFDIDWQGTQQLGETAQQDLVKVFLLPPTAADLEQRLRSRAQDSEEVVHQRMAKASDE EEEEEECCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ISHYTEYDYIIINHEVDDSLVKLTAILQAERLKRRRLTGLSSFVKGLRDAL HHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA