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The map label for this gene is yicC [C]

Identifier: 154247064

GI number: 154247064

Start: 3478090

End: 3479022

Strand: Direct

Name: yicC [C]

Synonym: Xaut_3135

Alternate gene names: 154247064

Gene position: 3478090-3479022 (Clockwise)

Preceding gene: 154247063

Following gene: 154247065

Centisome position: 65.51

GC content: 72.03

Gene sequence:

>933_bases
ATGAAGCGTGCCGCCGTGACCACCAACCGCGTTCCGGCTTCGGCCCGGGCCCCCCTCGCCAGCATGACTGGCTTTGCCCG
CGTTGCCGGCTCCCATGGGCCGTGGCGTTTCGGCTGGGAGGTGCGTTCGGTCAACGGCAAGGGGCTGGACCTGCGGCTGC
GCCTGCCGCCGGGCTTCGAGGTGCTGGAGGCGGACGTGCGCACCCGCACCGGGCAGGTCCTGACCCGCGGCTCGGTCTCC
GCCACCCTCGCCGCCACCCGCGAGGGGGAGACCAGCACGGTTCGGGTCAACCAGGGGGCGCTGGAGGCGCTGTACCGGAC
GGTGTCCGAGAGCGCTCGCCGCCTCGGCGCGCCGGAGCCCACCCTCGACGCCCTGGTGGCGGTGAAGGGCATGGTGGAGA
TCGCCGAGGCCGATGAGGGCGAGGAGGAGCGCCGCGCGCTCATGTCCGCCATGCTCTCGGCCTTCGACCGGGCGTTGGGG
GAACTCGGCGCCATGCGCGCCCGCGAGGGCGAGGCGCTCAATGCCATCCTCTCCGAGCGGCTCGATGCCATTGCCGCCCT
GCTGGTGCGGGCCGAGCGCCTGCCCGAGCGTGGCGTCGAGGCCATCAAGGCCCGCATCGCCGAGCAGGTGCGGGTGCTGA
TGGAGGCCGCCACACTGGATCCCGACCGCCTGCACCAGGAGGCGGTGCTCGCCGTCACCAAGGCCGACGTGCGTGAGGAA
CTGGACCGGCTCAGCGCCCATATCGCCGCCGCGCGCGACCTGCTGCACACCGGCGGCCCGGCCGGCCGGCGGCTCGATTT
CCTGGCCCAGGAGTTCAACCGCGAGGCGAACACCCTGTGCTCCAAGTCCAATTCCGTGGCGCTGACGCAGATCGGGCTTG
ACCTGAAGCTGCTGGTGGACCAGTTCCGCGAGCAGATCCAGAACCTCGAGTGA

Upstream 100 bases:

>100_bases
CTCAGGTTATTGTGTTAAGCGGTTTCAGGACGCAGGACCGTTGGCCCGTCTTCCGAAACGCCCTTGACCCCTTGAGCGCG
GCGTCGCCGCAGGATCGAAC

Downstream 100 bases:

>100_bases
AGCCCGAACCCATGCCGCAATCCGCCTCTTCCTCCGTGTCGTCGCACTTCGCGCTGCCGGGCTGGAAGCCGGGCGCGGGT
ATCCTCGCGCGGCGCGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKRAAVTTNRVPASARAPLASMTGFARVAGSHGPWRFGWEVRSVNGKGLDLRLRLPPGFEVLEADVRTRTGQVLTRGSVS
ATLAATREGETSTVRVNQGALEALYRTVSESARRLGAPEPTLDALVAVKGMVEIAEADEGEEERRALMSAMLSAFDRALG
ELGAMRAREGEALNAILSERLDAIAALLVRAERLPERGVEAIKARIAEQVRVLMEAATLDPDRLHQEAVLAVTKADVREE
LDRLSAHIAAARDLLHTGGPAGRRLDFLAQEFNREANTLCSKSNSVALTQIGLDLKLLVDQFREQIQNLE

Sequences:

>Translated_310_residues
MKRAAVTTNRVPASARAPLASMTGFARVAGSHGPWRFGWEVRSVNGKGLDLRLRLPPGFEVLEADVRTRTGQVLTRGSVS
ATLAATREGETSTVRVNQGALEALYRTVSESARRLGAPEPTLDALVAVKGMVEIAEADEGEEERRALMSAMLSAFDRALG
ELGAMRAREGEALNAILSERLDAIAALLVRAERLPERGVEAIKARIAEQVRVLMEAATLDPDRLHQEAVLAVTKADVREE
LDRLSAHIAAARDLLHTGGPAGRRLDFLAQEFNREANTLCSKSNSVALTQIGLDLKLLVDQFREQIQNLE
>Mature_310_residues
MKRAAVTTNRVPASARAPLASMTGFARVAGSHGPWRFGWEVRSVNGKGLDLRLRLPPGFEVLEADVRTRTGQVLTRGSVS
ATLAATREGETSTVRVNQGALEALYRTVSESARRLGAPEPTLDALVAVKGMVEIAEADEGEEERRALMSAMLSAFDRALG
ELGAMRAREGEALNAILSERLDAIAALLVRAERLPERGVEAIKARIAEQVRVLMEAATLDPDRLHQEAVLAVTKADVREE
LDRLSAHIAAARDLLHTGGPAGRRLDFLAQEFNREANTLCSKSNSVALTQIGLDLKLLVDQFREQIQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=304, Percent_Identity=36.5131578947368, Blast_Score=137, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33630; Mature: 33630

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAAVTTNRVPASARAPLASMTGFARVAGSHGPWRFGWEVRSVNGKGLDLRLRLPPGFE
CCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCEEECCEEEECCCCCEEEEEECCCCHH
VLEADVRTRTGQVLTRGSVSATLAATREGETSTVRVNQGALEALYRTVSESARRLGAPEP
HHHHHHHHHCCCCEECCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCH
TLDALVAVKGMVEIAEADEGEEERRALMSAMLSAFDRALGELGAMRAREGEALNAILSER
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LDAIAALLVRAERLPERGVEAIKARIAEQVRVLMEAATLDPDRLHQEAVLAVTKADVREE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LDRLSAHIAAARDLLHTGGPAGRRLDFLAQEFNREANTLCSKSNSVALTQIGLDLKLLVD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHCCCCCEEEEECCCHHHHHHH
QFREQIQNLE
HHHHHHHCCC
>Mature Secondary Structure
MKRAAVTTNRVPASARAPLASMTGFARVAGSHGPWRFGWEVRSVNGKGLDLRLRLPPGFE
CCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCEEECCEEEECCCCCEEEEEECCCCHH
VLEADVRTRTGQVLTRGSVSATLAATREGETSTVRVNQGALEALYRTVSESARRLGAPEP
HHHHHHHHHCCCCEECCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCH
TLDALVAVKGMVEIAEADEGEEERRALMSAMLSAFDRALGELGAMRAREGEALNAILSER
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LDAIAALLVRAERLPERGVEAIKARIAEQVRVLMEAATLDPDRLHQEAVLAVTKADVREE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LDRLSAHIAAARDLLHTGGPAGRRLDFLAQEFNREANTLCSKSNSVALTQIGLDLKLLVD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHCCCCCEEEEECCCHHHHHHH
QFREQIQNLE
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]