| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yceG [C]
Identifier: 154247063
GI number: 154247063
Start: 3476578
End: 3477906
Strand: Direct
Name: yceG [C]
Synonym: Xaut_3134
Alternate gene names: 154247063
Gene position: 3476578-3477906 (Clockwise)
Preceding gene: 154247062
Following gene: 154247064
Centisome position: 65.49
GC content: 70.35
Gene sequence:
>1329_bases ATGGCCGAATCCAACGACGGATCACCAAAGGCCGGAGTACCGGACGCCACCGGACCCGACGGGTCGATTGTGCCCCCCGC CGATGTGACCGCGACCGACAGCACCGAAGCTGCGGCCGGCCCCGCCGCAGGGTCCGCCCCGTCCGCGCCAGCGTCCGCCA GCGCCAAACCTGCGCCCAAGCCCCTTGCGCCCAAGCCCCCGGCGCCTAAGCCCGCGCCCAGGGGATCGGCGCGATCCGGC CGCGGTGCCCGGCAGACCAAGGCGGCGCGCCCCTCGCGCGCGGCGCGGCATCCGGCGGTGACCGTTCTCAGCGGCCTCTT CACCTTCCTGCTGTTCCTCGCGGTCGGCGGTGGCCTCGGGGCCTGGTACGCCGAGCGCGCCTTCTATGCCCCCGGCCCCC TCGCCACCGAGAAGGTGGTGAACATCCCGCGCGGGTCCGGCGTGCGCGACATGGGCGACATTCTCGAGCGCGAGGGGGTG ATCACCAACGCCCTGCTGTTCCTGGTCGGCCAGCGCATTGCCCGGCCCGATGCCAGCTTCAAGGCCGGCGAATTCGTCTT CAAGCCCGGCCAGTCGCTGGCGAGCGTCATCGACACCCTGGCCGCCGGCAAGATGGTGGTGCACCAGATCACCATTCCCG AGGGCCTGACCAGCCAGCAGGTGGTCAAGCGCCTGATGGACAACGAGCTGCTCACCGGCACTCCCGCCGTGCCGGCCGAG GGGACGCTGCTGCCTGAGACTTACCAGATCACCCGCGGCCAGACCCGCGAGGAGGTGCTGAAGAAGATGGCCGAGGAGCA GCGTAAGCTGCTCGCCACCCTCTGGGCCAAGCGCGCGCCCGACGTGCCGGTCAAAAGCCCGCAGGAACTGGTCACCCTCG CCTCCATCGTGGAGAAGGAGACCGGCCTTGCCGCCGAGCGGCCCAAGGTGGCCGCGGTGTTCGTCAACCGGATCAACAAG AAGATGCGGCTCCAGTCGGATCCGACCATCATCTACGGCATCGTCGGTGGACGCGGCTCCCTGGGGCGGCCCATCAGCCG CACTGACATCGCCACCGCGACGGCATATAATACCTACGCCATCGACGGCCTGCCGCCCGGCCCCATCTGCAATCCGGGGC GCGACGCGCTGGCGGCAGTGGCCAATCCGCCCAAAACGAAGGATCTGTTCTTCGTCGCGGACGGCACGGGCGGCCATGCC TTCGCCGAGACGCTAGCCGACCACAACAAGAATGTCGCCCGCTGGCGCGCCATCGAGCAGGGCAACGCCCCAGCCGCCCC GGCTACGGGCACGCCGGCCCCCACCGCGGCGCCGAATTCGGGCAACTAG
Upstream 100 bases:
>100_bases CCGTTGCGCCTGAATGTGCCTTTAGCAAGCCTCCCATGCGGCGGCGTTCCGGCCCAAACGTTTGACCGCGCGCCTTCGCC GACGACAGGGGAGCCCTTGG
Downstream 100 bases:
>100_bases GGCATGCTCTGATCCGATCGCATGGCGATTATGGTCGGATATGTCTTCAAGGCAGGCCTGAAGCCGGATCACAATGTCCC GGCCTCAGGTTATTGTGTTA
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MAESNDGSPKAGVPDATGPDGSIVPPADVTATDSTEAAAGPAAGSAPSAPASASAKPAPKPLAPKPPAPKPAPRGSARSG RGARQTKAARPSRAARHPAVTVLSGLFTFLLFLAVGGGLGAWYAERAFYAPGPLATEKVVNIPRGSGVRDMGDILEREGV ITNALLFLVGQRIARPDASFKAGEFVFKPGQSLASVIDTLAAGKMVVHQITIPEGLTSQQVVKRLMDNELLTGTPAVPAE GTLLPETYQITRGQTREEVLKKMAEEQRKLLATLWAKRAPDVPVKSPQELVTLASIVEKETGLAAERPKVAAVFVNRINK KMRLQSDPTIIYGIVGGRGSLGRPISRTDIATATAYNTYAIDGLPPGPICNPGRDALAAVANPPKTKDLFFVADGTGGHA FAETLADHNKNVARWRAIEQGNAPAAPATGTPAPTAAPNSGN
Sequences:
>Translated_442_residues MAESNDGSPKAGVPDATGPDGSIVPPADVTATDSTEAAAGPAAGSAPSAPASASAKPAPKPLAPKPPAPKPAPRGSARSG RGARQTKAARPSRAARHPAVTVLSGLFTFLLFLAVGGGLGAWYAERAFYAPGPLATEKVVNIPRGSGVRDMGDILEREGV ITNALLFLVGQRIARPDASFKAGEFVFKPGQSLASVIDTLAAGKMVVHQITIPEGLTSQQVVKRLMDNELLTGTPAVPAE GTLLPETYQITRGQTREEVLKKMAEEQRKLLATLWAKRAPDVPVKSPQELVTLASIVEKETGLAAERPKVAAVFVNRINK KMRLQSDPTIIYGIVGGRGSLGRPISRTDIATATAYNTYAIDGLPPGPICNPGRDALAAVANPPKTKDLFFVADGTGGHA FAETLADHNKNVARWRAIEQGNAPAAPATGTPAPTAAPNSGN >Mature_441_residues AESNDGSPKAGVPDATGPDGSIVPPADVTATDSTEAAAGPAAGSAPSAPASASAKPAPKPLAPKPPAPKPAPRGSARSGR GARQTKAARPSRAARHPAVTVLSGLFTFLLFLAVGGGLGAWYAERAFYAPGPLATEKVVNIPRGSGVRDMGDILEREGVI TNALLFLVGQRIARPDASFKAGEFVFKPGQSLASVIDTLAAGKMVVHQITIPEGLTSQQVVKRLMDNELLTGTPAVPAEG TLLPETYQITRGQTREEVLKKMAEEQRKLLATLWAKRAPDVPVKSPQELVTLASIVEKETGLAAERPKVAAVFVNRINKK MRLQSDPTIIYGIVGGRGSLGRPISRTDIATATAYNTYAIDGLPPGPICNPGRDALAAVANPPKTKDLFFVADGTGGHAF AETLADHNKNVARWRAIEQGNAPAAPATGTPAPTAAPNSGN
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=327, Percent_Identity=37.0030581039755, Blast_Score=195, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 45754; Mature: 45622
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESNDGSPKAGVPDATGPDGSIVPPADVTATDSTEAAAGPAAGSAPSAPASASAKPAPK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLAPKPPAPKPAPRGSARSGRGARQTKAARPSRAARHPAVTVLSGLFTFLLFLAVGGGLG CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCHH AWYAERAFYAPGPLATEKVVNIPRGSGVRDMGDILEREGVITNALLFLVGQRIARPDASF HHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC KAGEFVFKPGQSLASVIDTLAAGKMVVHQITIPEGLTSQQVVKRLMDNELLTGTPAVPAE CCCCEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCC GTLLPETYQITRGQTREEVLKKMAEEQRKLLATLWAKRAPDVPVKSPQELVTLASIVEKE CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TGLAAERPKVAAVFVNRINKKMRLQSDPTIIYGIVGGRGSLGRPISRTDIATATAYNTYA HCCCCCCCHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEE IDGLPPGPICNPGRDALAAVANPPKTKDLFFVADGTGGHAFAETLADHNKNVARWRAIEQ ECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHC GNAPAAPATGTPAPTAAPNSGN CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AESNDGSPKAGVPDATGPDGSIVPPADVTATDSTEAAAGPAAGSAPSAPASASAKPAPK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLAPKPPAPKPAPRGSARSGRGARQTKAARPSRAARHPAVTVLSGLFTFLLFLAVGGGLG CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCHH AWYAERAFYAPGPLATEKVVNIPRGSGVRDMGDILEREGVITNALLFLVGQRIARPDASF HHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC KAGEFVFKPGQSLASVIDTLAAGKMVVHQITIPEGLTSQQVVKRLMDNELLTGTPAVPAE CCCCEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCC GTLLPETYQITRGQTREEVLKKMAEEQRKLLATLWAKRAPDVPVKSPQELVTLASIVEKE CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TGLAAERPKVAAVFVNRINKKMRLQSDPTIIYGIVGGRGSLGRPISRTDIATATAYNTYA HCCCCCCCHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEE IDGLPPGPICNPGRDALAAVANPPKTKDLFFVADGTGGHAFAETLADHNKNVARWRAIEQ ECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHC GNAPAAPATGTPAPTAAPNSGN CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]