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The map label for this gene is yjeA [H]

Identifier: 154247046

GI number: 154247046

Start: 3457830

End: 3458993

Strand: Direct

Name: yjeA [H]

Synonym: Xaut_3117

Alternate gene names: 154247046

Gene position: 3457830-3458993 (Clockwise)

Preceding gene: 154247041

Following gene: 154247047

Centisome position: 65.13

GC content: 67.53

Gene sequence:

>1164_bases
TTGCGGAAGCGCAGGCGTTTGCCTCTTCCGCTTCACATTTTATGCATAGGCCTTAGGCGAAACGTGTGGGTCAGGCGTGA
ACGAAACCGGGCTATGGTCGCCTGGCACAGACATGGAAAGTGGTCCGTCGTGAAGGCTTCCTGGGGATTTCTCGCTTTTG
CCGCCGTGGGCGTGATCGGCCTGGGCTCAGCCTTTGGCCAGACCTTTCAGCCGTCGCCCTCCGCCAACAAGCCTCTCGCG
ACCATGACGCCGACCGGCACCTTCGCTGCCTCGCAGGCCGCCGCCGAGCCGCCGGCCCCCGCCGCGGCCATGTCGGCGCC
GGCCGCGACGCCTGCCCCGACCGGCACCTCGCCGCAGAAGCTGGTGGCCTATTCCTCCGCCGTGGTGGATGGCCCCTATA
TCGCCATGACCTTCGACGACGGCCCGAACCCCGAGACCACGCCCCGGCTGCTGAAGATGCTGGAGCAGCGCGGCATCAAG
GCCACCTTCTTCGTGCTCGGAAGCCGGGCGACCGCCTCGCCCGCCATCATCAAGCAGATGATCGCGCAGGGCCACGAGGT
GGCCAACCATTCCTGGGATCACCCGCAGCTGCCCAAGATTTCGGTGGCGGCCGCCGACAAGCAGATCGGCGACACCAACG
CCGCCATCGAGCAGATCACCGGCAAGTCGCCGCTCTATGTGCGCCCGCCCTACGGCGCCATGACCCCGGCGCTGCGCGCC
CATCTGCGCGAGAAGTTCGGCTCGACCTTCATCTACTGGTCGGTGGATCCGCTCGACTGGAAGGACCGCAACGCCCAGGT
CATCCACGACCGCATCGTGTCCCACGCCCACCCCGGCGCCATCGTGCTGGCCCACGACATCCATCCCACCACGGTGGATG
CGATGCCCAAGGTGCTCGATGACCTCAAGGCCAAGGGCTACAAGTTCGTCACCGTCTCCGAGCTGATCGCCATGAACAAG
GGCGTGCCGGAGCCGAAGGTGGCCTCCACCACCCCGGCGCCGAAGAAGAAGCCGAAGCCGGCCAATCCCGCCTCGGCCTC
CGCGGCCGGCGCCAATGGCACGGCCGCCACGCCGGTCTCGGCCAAGCCCGCTTCCGCCAAGCCCGCCTCGGCCAAGCCGG
CGACGCCGACACGCAATTCCAGCACCAGCATGGGCCTGTTCTGA

Upstream 100 bases:

>100_bases
TGTACGCGGCCCATCCGACATGCGCGGCCCTCCGGTTATCAAATTTGGGGAGGGCAGAGACACCCGGAATGTGGGCGAGT
CAAGGCGAGGGAACTTGACT

Downstream 100 bases:

>100_bases
GCGGAGCGGGCGCGCCAGCGGTCGCGAGGCGCGCGCGAAACTTGCTTTGCGCGCAGAATCTGCTATACGCCCCGCTTCCG
TCGCACCCGGCCGGGGGCTG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MRKRRRLPLPLHILCIGLRRNVWVRRERNRAMVAWHRHGKWSVVKASWGFLAFAAVGVIGLGSAFGQTFQPSPSANKPLA
TMTPTGTFAASQAAAEPPAPAAAMSAPAATPAPTGTSPQKLVAYSSAVVDGPYIAMTFDDGPNPETTPRLLKMLEQRGIK
ATFFVLGSRATASPAIIKQMIAQGHEVANHSWDHPQLPKISVAAADKQIGDTNAAIEQITGKSPLYVRPPYGAMTPALRA
HLREKFGSTFIYWSVDPLDWKDRNAQVIHDRIVSHAHPGAIVLAHDIHPTTVDAMPKVLDDLKAKGYKFVTVSELIAMNK
GVPEPKVASTTPAPKKKPKPANPASASAAGANGTAATPVSAKPASAKPASAKPATPTRNSSTSMGLF

Sequences:

>Translated_387_residues
MRKRRRLPLPLHILCIGLRRNVWVRRERNRAMVAWHRHGKWSVVKASWGFLAFAAVGVIGLGSAFGQTFQPSPSANKPLA
TMTPTGTFAASQAAAEPPAPAAAMSAPAATPAPTGTSPQKLVAYSSAVVDGPYIAMTFDDGPNPETTPRLLKMLEQRGIK
ATFFVLGSRATASPAIIKQMIAQGHEVANHSWDHPQLPKISVAAADKQIGDTNAAIEQITGKSPLYVRPPYGAMTPALRA
HLREKFGSTFIYWSVDPLDWKDRNAQVIHDRIVSHAHPGAIVLAHDIHPTTVDAMPKVLDDLKAKGYKFVTVSELIAMNK
GVPEPKVASTTPAPKKKPKPANPASASAAGANGTAATPVSAKPASAKPASAKPATPTRNSSTSMGLF
>Mature_387_residues
MRKRRRLPLPLHILCIGLRRNVWVRRERNRAMVAWHRHGKWSVVKASWGFLAFAAVGVIGLGSAFGQTFQPSPSANKPLA
TMTPTGTFAASQAAAEPPAPAAAMSAPAATPAPTGTSPQKLVAYSSAVVDGPYIAMTFDDGPNPETTPRLLKMLEQRGIK
ATFFVLGSRATASPAIIKQMIAQGHEVANHSWDHPQLPKISVAAADKQIGDTNAAIEQITGKSPLYVRPPYGAMTPALRA
HLREKFGSTFIYWSVDPLDWKDRNAQVIHDRIVSHAHPGAIVLAHDIHPTTVDAMPKVLDDLKAKGYKFVTVSELIAMNK
GVPEPKVASTTPAPKKKPKPANPASASAAGANGTAATPVSAKPASAKPASAKPATPTRNSSTSMGLF

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=177, Percent_Identity=35.5932203389831, Blast_Score=94, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6323339, Length=172, Percent_Identity=31.9767441860465, Blast_Score=85, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 41100; Mature: 41100

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRRRLPLPLHILCIGLRRNVWVRRERNRAMVAWHRHGKWSVVKASWGFLAFAAVGVIG
CCCCCCCCCCHHHEEEEHHCCEEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHH
LGSAFGQTFQPSPSANKPLATMTPTGTFAASQAAAEPPAPAAAMSAPAATPAPTGTSPQK
HHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHH
LVAYSSAVVDGPYIAMTFDDGPNPETTPRLLKMLEQRGIKATFFVLGSRATASPAIIKQM
HHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH
IAQGHEVANHSWDHPQLPKISVAAADKQIGDTNAAIEQITGKSPLYVRPPYGAMTPALRA
HHCCHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHH
HLREKFGSTFIYWSVDPLDWKDRNAQVIHDRIVSHAHPGAIVLAHDIHPTTVDAMPKVLD
HHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
DLKAKGYKFVTVSELIAMNKGVPEPKVASTTPAPKKKPKPANPASASAAGANGTAATPVS
HHHHCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKPASAKPASAKPATPTRNSSTSMGLF
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKRRRLPLPLHILCIGLRRNVWVRRERNRAMVAWHRHGKWSVVKASWGFLAFAAVGVIG
CCCCCCCCCCHHHEEEEHHCCEEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHH
LGSAFGQTFQPSPSANKPLATMTPTGTFAASQAAAEPPAPAAAMSAPAATPAPTGTSPQK
HHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHH
LVAYSSAVVDGPYIAMTFDDGPNPETTPRLLKMLEQRGIKATFFVLGSRATASPAIIKQM
HHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH
IAQGHEVANHSWDHPQLPKISVAAADKQIGDTNAAIEQITGKSPLYVRPPYGAMTPALRA
HHCCHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHH
HLREKFGSTFIYWSVDPLDWKDRNAQVIHDRIVSHAHPGAIVLAHDIHPTTVDAMPKVLD
HHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
DLKAKGYKFVTVSELIAMNKGVPEPKVASTTPAPKKKPKPANPASASAAGANGTAATPVS
HHHHCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKPASAKPASAKPATPTRNSSTSMGLF
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]