| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247043
Identifier: 154247043
GI number: 154247043
Start: 3453123
End: 3455639
Strand: Reverse
Name: 154247043
Synonym: Xaut_3114
Alternate gene names: NA
Gene position: 3455639-3453123 (Counterclockwise)
Preceding gene: 154247044
Following gene: 154247042
Centisome position: 65.09
GC content: 70.16
Gene sequence:
>2517_bases ATGAAGATCGAGCCTGTGAGCCCTGAAATCGGGCTCAAGGGGCGGAGTGCGGAGACGCCGCACACGTCCCGTTTGCTCGG CCGCATCTGGGGTCGCGTTCTCGATTTCGGGCTGATCCTGTGGGTAGTGAGGGTGCCGCTGGCCAGCGTCGTCCTCGGCC TGCTGCTCATGTCCGCCGTGACCCAGGCCCAGGATGTGACGCTGGACGTCGCCATGGCGGGGGCGCCCGTCGGCGCGGCC GCTGGCCTGTCCCGCACCATGATCGCCCTGCTCGCCGCCGTGTTCCTGCTGTGGGCCATGCCGGTGCACTACGCCGCCCG CCTCCTGATGGAGACGGACAAGGGCATCGCCGACATCAGCACCCGGCGCAATGCCGCCGCCGCCGCGAGGGGCGGCAAGC ACGACCTGATCTTCTGCCTGATGCTGCGCCTTGTGCCGCGCATTCTCGGCGCGCTCACCTTCGTCGCCTTCGCCATCGGC GCGCGCAACGCCATCGGCAACCTGCCCACCCTCGCCGACCGGCCCGCCATGGCGGCCGCCCATGACCAGCTGGCGCTTCT GTCCTGGGTCATGCTGGCCGGCGCGCCGCTGTTCTATGCCTATACCCTCATGCGCGGGCTATTCACCGACGTGGGCCCCC TCAAGGCCTTCGATGCGGCGCTGGGGCGGCGGCTCGCCGGCGTGTTCGCCGCGCTCGGCATCGAGGCGCGGCCGGACGAT CCCGAGGCGGAACTGCACGCCACGGGCCGGCTGATCCTCCTCGCCTATGCGGTGCTGGTCATCGTGGTGCTGGCCGCCAG CCCCCACTGGCTGGCCCGGCAGTTGCCCCTCGCCTTTGCCGTGCCGCTCATCTTCGGCGGCTGGGTCCCTGTTCTCGGCT ACCTGTCCTCGGTGGGACGGCGCTTCCATGTGCCGATCCTGACCGGCCTCTTTCTTCTCGGCGCCGTTGGCGTCTATGTC TTCGGCGACAACCACGCGGTGCGCACCCTCACGGCGGTCGAGCCGGCGTACCGCCGCACCGCCATGGTACAGGCGGTCCA GCTTTGGATGCGCGCCAACGGCTGCGCCGAGGCCCCGGCCTCCTGCCCGCGCCCGGTCATCGTCGCTGCGGCGGGCGGGG CAAGCCGGGCCGGCTTCTTCACCGCCAGCGTCATCGGCCATTTCCTCGATTTCGAGCGCCACAAGCAGGGCTTCTCCTTC ACCCGGGCTGACGGCTCGAAGATCAACCGGGCCGCCCGCGACGACGGCCGCTTCACCCCCGCCATCGAGCAGGCCCTGAA CGGCAAGGACATTGCGACCCGCATCTTCGCCATTTCCGGCGTGTCCGGCGGGTCCTACGGCGCCGCCGTGGTGGCGGCGG CGCTGGCGGCCCGCACCGGTTCCGCTGCGCCCTGCCCCGACAAGGCGCCGGACGGCTGGTTCGGCGGCACGCTCGCCGGC TGGCGCGACTGCCTGGAGAGCATGACGGCGGGCGATTATCTCACCGCCACCTTCTTCGGCCTCGCCTTCCACGATCAGGT CCAGCTTTTCCTTTCCGATCGCGCCGCGCTGCTGGAGCAATCCTGGGAGGATAATTTCGCCCGGCATGTTCTGGCGGCAG GCGCAAAGGCGTCGCCCGATTCGGCAAGCCGGCTGGCGACGCCCTTCCTCGGCTCGCCGCCCGATCCGGATCGCTGGGTG CCCTTCCTCGTGCTGAACGGCACCTCGGTGGAGACCGGCCAGCGCATCGTCACCACCAACCTTTCGCCCACCTATGCCAC CACCGGCCGCTGCCCCTCGGGCGGGCCCAACGCGGAATGCTCCCTCTTCACCCACGCCATCGACTTCCACGGCCTGGTGC GATCCGATCTCGACGTGCGGCTGTCCACCGCTGCCACCAACTCCGCCCGCTTCCCGGTGATTTCGCCGCCGGGCTCCATC TACCAGATGGACACCGACGTGGTGGACCGCATCGTGGACGGCGGCTACTTCGAGAATTTCGGGGTGGAAAGCGCGGTTGA ACTGGCCAAGGCCATGGTGGAGATCGAGCCACGGCTCGCCCCCTTCATTCTGGTGGTCGCCAACGATCCGGGCAGCGTGC TGACCGAGGAGCGTACTGCCCGCAGCGGCAGCGGCGTGGTGGTGCCCGACGCCCCGGACCACGCAGCCTTCACGGAGATC TCCGGGCCGGTGGGCGCCATCGGGGCGGTGCGCAGTGGCCGTGGGCGGCTGGCGGTGGCGACGGCCACCCATTGGCTCGA CGCCCGCTTCGGCGACCGCTGCCCCACCAATCTGGTGCAGATCAAGGTATGGCCGGAGGCGGTGAAGGACGGCCACTGTC CGGTGGGCGAGGCCACGCCGGAGAAGATCCGCGACGTATCCATGAGCTGGTGGCTCTCCAAGCCCGTGCAGATGAACCTG CACGAGCAGCTGGAGGCCACTGCCGACCGCTGCAACAACGACACGGCGGTGGCAGCCGTATGGGCGGCGCTGGCGACGCC CTCGCTGGCCTGCACCGGCGGGGCTCCGCCGCGCTGA
Upstream 100 bases:
>100_bases ACGCCCCGACGACGGCCGGCCGCGCGCGAATGCGGCCGGCCGTTGTCTCAGTCCTGCGAAAGTTGTAGTGTCTTCAGGCG TGCGGGGACTGGAGGCACGC
Downstream 100 bases:
>100_bases TCGGGATGGCCCCGGCTGGCGGCCGGGGCCGAACGCGAATCGCCAGGGCACAGCACCGGCGCTCCCCTCGGCCCGCGGCG AAGGCGCGCGCGGATCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 838; Mature: 838
Protein sequence:
>838_residues MKIEPVSPEIGLKGRSAETPHTSRLLGRIWGRVLDFGLILWVVRVPLASVVLGLLLMSAVTQAQDVTLDVAMAGAPVGAA AGLSRTMIALLAAVFLLWAMPVHYAARLLMETDKGIADISTRRNAAAAARGGKHDLIFCLMLRLVPRILGALTFVAFAIG ARNAIGNLPTLADRPAMAAAHDQLALLSWVMLAGAPLFYAYTLMRGLFTDVGPLKAFDAALGRRLAGVFAALGIEARPDD PEAELHATGRLILLAYAVLVIVVLAASPHWLARQLPLAFAVPLIFGGWVPVLGYLSSVGRRFHVPILTGLFLLGAVGVYV FGDNHAVRTLTAVEPAYRRTAMVQAVQLWMRANGCAEAPASCPRPVIVAAAGGASRAGFFTASVIGHFLDFERHKQGFSF TRADGSKINRAARDDGRFTPAIEQALNGKDIATRIFAISGVSGGSYGAAVVAAALAARTGSAAPCPDKAPDGWFGGTLAG WRDCLESMTAGDYLTATFFGLAFHDQVQLFLSDRAALLEQSWEDNFARHVLAAGAKASPDSASRLATPFLGSPPDPDRWV PFLVLNGTSVETGQRIVTTNLSPTYATTGRCPSGGPNAECSLFTHAIDFHGLVRSDLDVRLSTAATNSARFPVISPPGSI YQMDTDVVDRIVDGGYFENFGVESAVELAKAMVEIEPRLAPFILVVANDPGSVLTEERTARSGSGVVVPDAPDHAAFTEI SGPVGAIGAVRSGRGRLAVATATHWLDARFGDRCPTNLVQIKVWPEAVKDGHCPVGEATPEKIRDVSMSWWLSKPVQMNL HEQLEATADRCNNDTAVAAVWAALATPSLACTGGAPPR
Sequences:
>Translated_838_residues MKIEPVSPEIGLKGRSAETPHTSRLLGRIWGRVLDFGLILWVVRVPLASVVLGLLLMSAVTQAQDVTLDVAMAGAPVGAA AGLSRTMIALLAAVFLLWAMPVHYAARLLMETDKGIADISTRRNAAAAARGGKHDLIFCLMLRLVPRILGALTFVAFAIG ARNAIGNLPTLADRPAMAAAHDQLALLSWVMLAGAPLFYAYTLMRGLFTDVGPLKAFDAALGRRLAGVFAALGIEARPDD PEAELHATGRLILLAYAVLVIVVLAASPHWLARQLPLAFAVPLIFGGWVPVLGYLSSVGRRFHVPILTGLFLLGAVGVYV FGDNHAVRTLTAVEPAYRRTAMVQAVQLWMRANGCAEAPASCPRPVIVAAAGGASRAGFFTASVIGHFLDFERHKQGFSF TRADGSKINRAARDDGRFTPAIEQALNGKDIATRIFAISGVSGGSYGAAVVAAALAARTGSAAPCPDKAPDGWFGGTLAG WRDCLESMTAGDYLTATFFGLAFHDQVQLFLSDRAALLEQSWEDNFARHVLAAGAKASPDSASRLATPFLGSPPDPDRWV PFLVLNGTSVETGQRIVTTNLSPTYATTGRCPSGGPNAECSLFTHAIDFHGLVRSDLDVRLSTAATNSARFPVISPPGSI YQMDTDVVDRIVDGGYFENFGVESAVELAKAMVEIEPRLAPFILVVANDPGSVLTEERTARSGSGVVVPDAPDHAAFTEI SGPVGAIGAVRSGRGRLAVATATHWLDARFGDRCPTNLVQIKVWPEAVKDGHCPVGEATPEKIRDVSMSWWLSKPVQMNL HEQLEATADRCNNDTAVAAVWAALATPSLACTGGAPPR >Mature_838_residues MKIEPVSPEIGLKGRSAETPHTSRLLGRIWGRVLDFGLILWVVRVPLASVVLGLLLMSAVTQAQDVTLDVAMAGAPVGAA AGLSRTMIALLAAVFLLWAMPVHYAARLLMETDKGIADISTRRNAAAAARGGKHDLIFCLMLRLVPRILGALTFVAFAIG ARNAIGNLPTLADRPAMAAAHDQLALLSWVMLAGAPLFYAYTLMRGLFTDVGPLKAFDAALGRRLAGVFAALGIEARPDD PEAELHATGRLILLAYAVLVIVVLAASPHWLARQLPLAFAVPLIFGGWVPVLGYLSSVGRRFHVPILTGLFLLGAVGVYV FGDNHAVRTLTAVEPAYRRTAMVQAVQLWMRANGCAEAPASCPRPVIVAAAGGASRAGFFTASVIGHFLDFERHKQGFSF TRADGSKINRAARDDGRFTPAIEQALNGKDIATRIFAISGVSGGSYGAAVVAAALAARTGSAAPCPDKAPDGWFGGTLAG WRDCLESMTAGDYLTATFFGLAFHDQVQLFLSDRAALLEQSWEDNFARHVLAAGAKASPDSASRLATPFLGSPPDPDRWV PFLVLNGTSVETGQRIVTTNLSPTYATTGRCPSGGPNAECSLFTHAIDFHGLVRSDLDVRLSTAATNSARFPVISPPGSI YQMDTDVVDRIVDGGYFENFGVESAVELAKAMVEIEPRLAPFILVVANDPGSVLTEERTARSGSGVVVPDAPDHAAFTEI SGPVGAIGAVRSGRGRLAVATATHWLDARFGDRCPTNLVQIKVWPEAVKDGHCPVGEATPEKIRDVSMSWWLSKPVQMNL HEQLEATADRCNNDTAVAAVWAALATPSLACTGGAPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88675; Mature: 88675
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEPVSPEIGLKGRSAETPHTSRLLGRIWGRVLDFGLILWVVRVPLASVVLGLLLMSAV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQAQDVTLDVAMAGAPVGAAAGLSRTMIALLAAVFLLWAMPVHYAARLLMETDKGIADIS HHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH TRRNAAAAARGGKHDLIFCLMLRLVPRILGALTFVAFAIGARNAIGNLPTLADRPAMAAA HHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH HDQLALLSWVMLAGAPLFYAYTLMRGLFTDVGPLKAFDAALGRRLAGVFAALGIEARPDD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PEAELHATGRLILLAYAVLVIVVLAASPHWLARQLPLAFAVPLIFGGWVPVLGYLSSVGR CCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC RFHVPILTGLFLLGAVGVYVFGDNHAVRTLTAVEPAYRRTAMVQAVQLWMRANGCAEAPA EEEHHHHHHHHHHHHHEEEEECCCCCEEEEHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC SCPRPVIVAAAGGASRAGFFTASVIGHFLDFERHKQGFSFTRADGSKINRAARDDGRFTP CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCCCCCCH AIEQALNGKDIATRIFAISGVSGGSYGAAVVAAALAARTGSAAPCPDKAPDGWFGGTLAG HHHHHCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH WRDCLESMTAGDYLTATFFGLAFHDQVQLFLSDRAALLEQSWEDNFARHVLAAGAKASPD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SASRLATPFLGSPPDPDRWVPFLVLNGTSVETGQRIVTTNLSPTYATTGRCPSGGPNAEC CHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCE SLFTHAIDFHGLVRSDLDVRLSTAATNSARFPVISPPGSIYQMDTDVVDRIVDGGYFENF EHEEHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCCCCEEEECHHHHHHHHCCCCCCCC GVESAVELAKAMVEIEPRLAPFILVVANDPGSVLTEERTARSGSGVVVPDAPDHAAFTEI CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHCCHHHCCCCCCEECCCCCCCCHHHHC SGPVGAIGAVRSGRGRLAVATATHWLDARFGDRCPTNLVQIKVWPEAVKDGHCPVGEATP CCCCHHHHHHCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCH EKIRDVSMSWWLSKPVQMNLHEQLEATADRCNNDTAVAAVWAALATPSLACTGGAPPR HHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure MKIEPVSPEIGLKGRSAETPHTSRLLGRIWGRVLDFGLILWVVRVPLASVVLGLLLMSAV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQAQDVTLDVAMAGAPVGAAAGLSRTMIALLAAVFLLWAMPVHYAARLLMETDKGIADIS HHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH TRRNAAAAARGGKHDLIFCLMLRLVPRILGALTFVAFAIGARNAIGNLPTLADRPAMAAA HHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH HDQLALLSWVMLAGAPLFYAYTLMRGLFTDVGPLKAFDAALGRRLAGVFAALGIEARPDD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PEAELHATGRLILLAYAVLVIVVLAASPHWLARQLPLAFAVPLIFGGWVPVLGYLSSVGR CCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC RFHVPILTGLFLLGAVGVYVFGDNHAVRTLTAVEPAYRRTAMVQAVQLWMRANGCAEAPA EEEHHHHHHHHHHHHHEEEEECCCCCEEEEHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC SCPRPVIVAAAGGASRAGFFTASVIGHFLDFERHKQGFSFTRADGSKINRAARDDGRFTP CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCCCCCCH AIEQALNGKDIATRIFAISGVSGGSYGAAVVAAALAARTGSAAPCPDKAPDGWFGGTLAG HHHHHCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH WRDCLESMTAGDYLTATFFGLAFHDQVQLFLSDRAALLEQSWEDNFARHVLAAGAKASPD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SASRLATPFLGSPPDPDRWVPFLVLNGTSVETGQRIVTTNLSPTYATTGRCPSGGPNAEC CHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCE SLFTHAIDFHGLVRSDLDVRLSTAATNSARFPVISPPGSIYQMDTDVVDRIVDGGYFENF EHEEHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCCCCEEEECHHHHHHHHCCCCCCCC GVESAVELAKAMVEIEPRLAPFILVVANDPGSVLTEERTARSGSGVVVPDAPDHAAFTEI CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHCCHHHCCCCCCEECCCCCCCCHHHHC SGPVGAIGAVRSGRGRLAVATATHWLDARFGDRCPTNLVQIKVWPEAVKDGHCPVGEATP CCCCHHHHHHCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCH EKIRDVSMSWWLSKPVQMNLHEQLEATADRCNNDTAVAAVWAALATPSLACTGGAPPR HHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA