| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247028
Identifier: 154247028
GI number: 154247028
Start: 3439894
End: 3440943
Strand: Reverse
Name: 154247028
Synonym: Xaut_3099
Alternate gene names: NA
Gene position: 3440943-3439894 (Counterclockwise)
Preceding gene: 154247029
Following gene: 154247027
Centisome position: 64.81
GC content: 70.76
Gene sequence:
>1050_bases ATGCCGTTCACCCTTCACCTCTCCCGGCGGGGGGCGCTCAGGTTGGGCGCGGCCCTCGGCGGCGCCGTCCTCGCCGATGC GCTGATGCCGGTCCGGGCCGAGGATGACCCGGATGTCACCGCCATCAAAGGGCTCAAGCCCGGGCAGTGGGTGTGGTATC CGGAGCGCGCGCCGGAGGGCTTCGTCGCCATCGTGGTGAACCTCACCGACCAACTCTGCTTCGTCTATCGCAACGGCGTG CGCATCGGGGTCGCCACCGTCTCCACCGGCAAGGACGGGCACGAGACGCCCACCGGCGTCTTCACCATCCTCGGCAAGGA CGTGGACCACCACTCCTCCATCTACAACAACGCCTCCATGCCCTACACCGAGCGCCTGACCTGGTCCGGGGTGGCACTGC ATGCGGGCGGGCTGCCGGGCTATCCCTCCTCCCACGGCTGCGTGCACCTTCCGCTCGCCTTCTCCAAGCTGGTGTTCACC GTCACCCATCTGGGCACCCCGGTGATCATCGCCGACAGCCATTCGGCGCCGCAGGACGTGCTGCACCCCGGCCTGCTCAT GAGCGAGGGGCTGGAGCAGCAGCTCGCCGTCTCGGCCACCGGCCAGGGCGCGCCGCCCGAGGACCAAGCGCAGGTGGCGG CGGCGGCCGGCGCTTCGGTGCCCATCGCGCCCGCCCCGCCGGAGCCGGTGTCCATGGTGGTCAGCGGAGCGGACCGGAGC ATCACCGTGCTGCGCGGCGCCCAGACCACGGTGCAGGGTCCCGTCACCATCCGCGATCCGGCAACGCCGCTGGGCAACGT GGTCTATGTGCTGATGTCCACGGACGGCGCCGCGCCGCGCTGGAGCGCCATTGCCTATGAGGGCGGCAAGCAGCCGCCGG GGGAAGCGCAGCAGGCGCTGGCGCGCATCACGGTGGACCCCGCCATCAACAAGCAGGTGGCAGCTCTGGTGACGCCGGGG GCGACCCTGTTCGTCACCGACCTGCCGGCCCATCCGGGCACCCGCAACGACGGCGGCTTCGTGGTGATGACCCACAAGGT GGAAAGCTGA
Upstream 100 bases:
>100_bases AGCCCCCCTCCCCCTTCGTCAGGGTGCGCCGCGCATGGACAGGCCCGGCGCGGCGCGCCACACATAGGGAAAGGCGATTC GCACGTTGGGGGGCCTCAAG
Downstream 100 bases:
>100_bases TGCGCCGCGCCGTCGGCGCCCTGCTCGGCCTGCTGGTCGCGGGCGCGCCGGCGCTGGTGCTGGCGCAGCAGGTAGCGCCC CCGGCCGCGCTTCCCGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family; Protein ErfK Family
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MPFTLHLSRRGALRLGAALGGAVLADALMPVRAEDDPDVTAIKGLKPGQWVWYPERAPEGFVAIVVNLTDQLCFVYRNGV RIGVATVSTGKDGHETPTGVFTILGKDVDHHSSIYNNASMPYTERLTWSGVALHAGGLPGYPSSHGCVHLPLAFSKLVFT VTHLGTPVIIADSHSAPQDVLHPGLLMSEGLEQQLAVSATGQGAPPEDQAQVAAAAGASVPIAPAPPEPVSMVVSGADRS ITVLRGAQTTVQGPVTIRDPATPLGNVVYVLMSTDGAAPRWSAIAYEGGKQPPGEAQQALARITVDPAINKQVAALVTPG ATLFVTDLPAHPGTRNDGGFVVMTHKVES
Sequences:
>Translated_349_residues MPFTLHLSRRGALRLGAALGGAVLADALMPVRAEDDPDVTAIKGLKPGQWVWYPERAPEGFVAIVVNLTDQLCFVYRNGV RIGVATVSTGKDGHETPTGVFTILGKDVDHHSSIYNNASMPYTERLTWSGVALHAGGLPGYPSSHGCVHLPLAFSKLVFT VTHLGTPVIIADSHSAPQDVLHPGLLMSEGLEQQLAVSATGQGAPPEDQAQVAAAAGASVPIAPAPPEPVSMVVSGADRS ITVLRGAQTTVQGPVTIRDPATPLGNVVYVLMSTDGAAPRWSAIAYEGGKQPPGEAQQALARITVDPAINKQVAALVTPG ATLFVTDLPAHPGTRNDGGFVVMTHKVES >Mature_348_residues PFTLHLSRRGALRLGAALGGAVLADALMPVRAEDDPDVTAIKGLKPGQWVWYPERAPEGFVAIVVNLTDQLCFVYRNGVR IGVATVSTGKDGHETPTGVFTILGKDVDHHSSIYNNASMPYTERLTWSGVALHAGGLPGYPSSHGCVHLPLAFSKLVFTV THLGTPVIIADSHSAPQDVLHPGLLMSEGLEQQLAVSATGQGAPPEDQAQVAAAAGASVPIAPAPPEPVSMVVSGADRSI TVLRGAQTTVQGPVTIRDPATPLGNVVYVLMSTDGAAPRWSAIAYEGGKQPPGEAQQALARITVDPAINKQVAALVTPGA TLFVTDLPAHPGTRNDGGFVVMTHKVES
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36288; Mature: 36157
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFTLHLSRRGALRLGAALGGAVLADALMPVRAEDDPDVTAIKGLKPGQWVWYPERAPEG CCEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEECCCCCCCC FVAIVVNLTDQLCFVYRNGVRIGVATVSTGKDGHETPTGVFTILGKDVDHHSSIYNNASM EEEEEEECCHHEEEEEECCEEEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHCCCCC PYTERLTWSGVALHAGGLPGYPSSHGCVHLPLAFSKLVFTVTHLGTPVIIADSHSAPQDV CCHHCEEECCEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHH LHPGLLMSEGLEQQLAVSATGQGAPPEDQAQVAAAAGASVPIAPAPPEPVSMVVSGADRS HCCCHHHHCCCHHHEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCE ITVLRGAQTTVQGPVTIRDPATPLGNVVYVLMSTDGAAPRWSAIAYEGGKQPPGEAQQAL EEEEECCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHH ARITVDPAINKQVAALVTPGATLFVTDLPAHPGTRNDGGFVVMTHKVES HEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure PFTLHLSRRGALRLGAALGGAVLADALMPVRAEDDPDVTAIKGLKPGQWVWYPERAPEG CEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEECCCCCCCC FVAIVVNLTDQLCFVYRNGVRIGVATVSTGKDGHETPTGVFTILGKDVDHHSSIYNNASM EEEEEEECCHHEEEEEECCEEEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHCCCCC PYTERLTWSGVALHAGGLPGYPSSHGCVHLPLAFSKLVFTVTHLGTPVIIADSHSAPQDV CCHHCEEECCEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHH LHPGLLMSEGLEQQLAVSATGQGAPPEDQAQVAAAAGASVPIAPAPPEPVSMVVSGADRS HCCCHHHHCCCHHHEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCE ITVLRGAQTTVQGPVTIRDPATPLGNVVYVLMSTDGAAPRWSAIAYEGGKQPPGEAQQAL EEEEECCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHH ARITVDPAINKQVAALVTPGATLFVTDLPAHPGTRNDGGFVVMTHKVES HEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA