| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is tilS [H]
Identifier: 154247011
GI number: 154247011
Start: 3421688
End: 3422794
Strand: Direct
Name: tilS [H]
Synonym: Xaut_3082
Alternate gene names: 154247011
Gene position: 3421688-3422794 (Clockwise)
Preceding gene: 154247010
Following gene: 154247012
Centisome position: 64.45
GC content: 73.26
Gene sequence:
>1107_bases ATGGACACGGGGGCGATCGATCTCCCGGAGAATTCCCCCATCGAGGACGGCGCGCTCGATGCCCTGTTCGCCCCCTTCAC GCCCCATCCCCGCATCCTGATCGCCGTCTCCGGCGGTCCTGATTCCACTGCCCTGCTGTATCTGGCCGCGCGCTGGCGCG CGGGCCGTGCGTCCGGTCCGGACCTGATCGCCGCTACGGTGGACCACGGCCTGAGGGCCGAGGCCGCAGCCGAGGCCGAA GCGGTCGGCGCCTTCGCCACCTTTCTGGGCGTACCCCATCGCATCCTGATCTGGCAGGGGGCCAAACCGACCCACGGCAT CCAGGAGGCGGCGCGGGAGGCGCGCTACGACCTGCTGGCGGACGCCGCGCGCGAGGCCGGGGCCACCGCCATCGCGCTCG CCCACACTCGCGACGATCAGGCGGAGACGGTGCTGTTCCGTCTCGCCCGCGGTTCGGGCCTCTCCGGCCTGTCCGGCATG CGCGGCGATGCCGCGCGCGACGGCTTGGCGCTGCTGCGCCCTTTGCTCGACGTGCCCAAGGCGCGGCTGGTGGCGACGCT GGAGGCGGCTAGCGTGGCGTTCGTCCGTGATCCCAGCAACAGCGACCCACGCTTCGCCCGCCCCCGCCTGCGCGCCATGG CGCCGACTCTGGCGGGGGAGGGGCTCGACGCCCGCCGCCTCGCCGTGCTGGCGCGCCGGATCGCGCGGGCGGACCAAGCG CTGGAGGCCGCGACCGATGCGGCCGAGGCGGCCGTCATCCGCCTCGGTGCCGAAGAGCACCCAGGTGCCGTCAGTCTCGA CGTCCGCGCCTTTGCCGCCCTGCCGGACGAGATCGCCCTGCGCCTTCTGGGCCGGGCCATCCAGAAGGTGGGGACCGAAG GCCCGGTGGAGCTTGCCAAGCTGGAAGCCCTTTACGAGGCCCTGAAAGCTGCGGCGCACGTCCCCTCTGGCCCCTTTCGC CGCACCCTGGCCGGTGCCCTGGTGAGCCTGCGCGGGGCGGCTCTGCGCGTCTCGGCCGCGCCGCCGCGCCGCGAACGCGG TCTTCTCGCACGGAATTCACCGGTCGATGGGCCTGTCGTCCTTGGCAAAAAGGGGCCTCGCTCCTAG
Upstream 100 bases:
>100_bases GCAAGTATCCGCGCGCCCCGTCCTCCATCCGCCAGGCGGTGGAGCGGGAACAGAAGCGCGTCGGCTGCTGAGGCCGAATG ACCCGGGTGGAGGCGCGGCG
Downstream 100 bases:
>100_bases ATTAGGCAGCGGACGGTGCGGGAGGCCCCACTGACGGCAGTCCAGTGCGGAGGTATTCCTTCCGTATGGTAAGGCGTCAA AACGGGCTGGCCCTGTCTGT
Product: tRNA(Ile)-lysidine synthetase
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase [H]
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MDTGAIDLPENSPIEDGALDALFAPFTPHPRILIAVSGGPDSTALLYLAARWRAGRASGPDLIAATVDHGLRAEAAAEAE AVGAFATFLGVPHRILIWQGAKPTHGIQEAAREARYDLLADAAREAGATAIALAHTRDDQAETVLFRLARGSGLSGLSGM RGDAARDGLALLRPLLDVPKARLVATLEAASVAFVRDPSNSDPRFARPRLRAMAPTLAGEGLDARRLAVLARRIARADQA LEAATDAAEAAVIRLGAEEHPGAVSLDVRAFAALPDEIALRLLGRAIQKVGTEGPVELAKLEALYEALKAAAHVPSGPFR RTLAGALVSLRGAALRVSAAPPRRERGLLARNSPVDGPVVLGKKGPRS
Sequences:
>Translated_368_residues MDTGAIDLPENSPIEDGALDALFAPFTPHPRILIAVSGGPDSTALLYLAARWRAGRASGPDLIAATVDHGLRAEAAAEAE AVGAFATFLGVPHRILIWQGAKPTHGIQEAAREARYDLLADAAREAGATAIALAHTRDDQAETVLFRLARGSGLSGLSGM RGDAARDGLALLRPLLDVPKARLVATLEAASVAFVRDPSNSDPRFARPRLRAMAPTLAGEGLDARRLAVLARRIARADQA LEAATDAAEAAVIRLGAEEHPGAVSLDVRAFAALPDEIALRLLGRAIQKVGTEGPVELAKLEALYEALKAAAHVPSGPFR RTLAGALVSLRGAALRVSAAPPRRERGLLARNSPVDGPVVLGKKGPRS >Mature_368_residues MDTGAIDLPENSPIEDGALDALFAPFTPHPRILIAVSGGPDSTALLYLAARWRAGRASGPDLIAATVDHGLRAEAAAEAE AVGAFATFLGVPHRILIWQGAKPTHGIQEAAREARYDLLADAAREAGATAIALAHTRDDQAETVLFRLARGSGLSGLSGM RGDAARDGLALLRPLLDVPKARLVATLEAASVAFVRDPSNSDPRFARPRLRAMAPTLAGEGLDARRLAVLARRIARADQA LEAATDAAEAAVIRLGAEEHPGAVSLDVRAFAALPDEIALRLLGRAIQKVGTEGPVELAKLEALYEALKAAAHVPSGPFR RTLAGALVSLRGAALRVSAAPPRRERGLLARNSPVDGPVVLGKKGPRS
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786386, Length=181, Percent_Identity=37.0165745856354, Blast_Score=86, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012094 - InterPro: IPR012795 - InterPro: IPR014729 - InterPro: IPR011063 [H]
Pfam domain/function: PF01171 ATP_bind_3 [H]
EC number: NA
Molecular weight: Translated: 38364; Mature: 38364
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTGAIDLPENSPIEDGALDALFAPFTPHPRILIAVSGGPDSTALLYLAARWRAGRASGP CCCCCEECCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEHHHCCCCCCCC DLIAATVDHGLRAEAAAEAEAVGAFATFLGVPHRILIWQGAKPTHGIQEAAREARYDLLA CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH DAAREAGATAIALAHTRDDQAETVLFRLARGSGLSGLSGMRGDAARDGLALLRPLLDVPK HHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCHHHHHHHHHHCCH ARLVATLEAASVAFVRDPSNSDPRFARPRLRAMAPTLAGEGLDARRLAVLARRIARADQA HHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LEAATDAAEAAVIRLGAEEHPGAVSLDVRAFAALPDEIALRLLGRAIQKVGTEGPVELAK HHHHHHHHHHHHEEECCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH LEALYEALKAAAHVPSGPFRRTLAGALVSLRGAALRVSAAPPRRERGLLARNSPVDGPVV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCCCCCCCCEE LGKKGPRS ECCCCCCC >Mature Secondary Structure MDTGAIDLPENSPIEDGALDALFAPFTPHPRILIAVSGGPDSTALLYLAARWRAGRASGP CCCCCEECCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEHHHCCCCCCCC DLIAATVDHGLRAEAAAEAEAVGAFATFLGVPHRILIWQGAKPTHGIQEAAREARYDLLA CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH DAAREAGATAIALAHTRDDQAETVLFRLARGSGLSGLSGMRGDAARDGLALLRPLLDVPK HHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCHHHHHHHHHHCCH ARLVATLEAASVAFVRDPSNSDPRFARPRLRAMAPTLAGEGLDARRLAVLARRIARADQA HHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LEAATDAAEAAVIRLGAEEHPGAVSLDVRAFAALPDEIALRLLGRAIQKVGTEGPVELAK HHHHHHHHHHHHEEECCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH LEALYEALKAAAHVPSGPFRRTLAGALVSLRGAALRVSAAPPRRERGLLARNSPVDGPVV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCCCCCCCCEE LGKKGPRS ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA