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The map label for this gene is omp16 [H]

Identifier: 154247009

GI number: 154247009

Start: 3419997

End: 3420491

Strand: Direct

Name: omp16 [H]

Synonym: Xaut_3080

Alternate gene names: 154247009

Gene position: 3419997-3420491 (Clockwise)

Preceding gene: 154247008

Following gene: 154247010

Centisome position: 64.42

GC content: 67.47

Gene sequence:

>495_bases
ATGCGTTTCCTCAGGCTAGCTCGCGGGTTCCGGTTCGCGGCGCTTTTCGGCTTCGCGCTGGCCCTTGCCGCGTGTGCCAA
CAATCCCAACCAGAACGCCGCCGGTGCCGGTGGTGCGGGCGGCCCGCCCGGTTCGCCACAGGAATTCGTGGTGGCGGTGG
GCGATCGCGTGTTCTTCGAAAGCGACCAGACCGACCTCACGCCCCAGGCGAGGGCCACCCTGGATCGTCAGGCCCAGTGG
CTCCAGCAGTGGAACCGCTACACCTTCACCATCGAAGGCCATGCGGACGAGCGCGGCACCCGCGAATACAACATCGCCCT
CGGCGCCAAGCGGGCCCAGAGCGTGCGTGACTATCTCGCTGCCCGCGGTATCGATCCGGCCCGCATGCGGACGATCTCGT
ATGGCAAGGAACGCCCCGTCGCGGTCTGCAACGACATCTCCTGTTGGTCGCAGAACCGTCGCGCCGTCACCGTGCTGAAC
GCCGGCGGCGCCTAA

Upstream 100 bases:

>100_bases
GGCAGGACATGCGGCTTCAGGCCGTGCACGGAACGTTCGCTTAACCGGCCGGCTGATAGACGAAAGCCTCCGGTCCAGCG
TTGAGAAGGGAGATACCGGA

Downstream 100 bases:

>100_bases
GCGCGCCAGCCGGTCGCATCGAAAAGGGCCGGCGCCGCCTGCGGCTGCCGGCCCTTTCGCTTTGCGGGGGAGGGGGAGCG
GGAGTGTCTTGTGTCCGGAA

Product: peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRFLRLARGFRFAALFGFALALAACANNPNQNAAGAGGAGGPPGSPQEFVVAVGDRVFFESDQTDLTPQARATLDRQAQW
LQQWNRYTFTIEGHADERGTREYNIALGAKRAQSVRDYLAARGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVLN
AGGA

Sequences:

>Translated_164_residues
MRFLRLARGFRFAALFGFALALAACANNPNQNAAGAGGAGGPPGSPQEFVVAVGDRVFFESDQTDLTPQARATLDRQAQW
LQQWNRYTFTIEGHADERGTREYNIALGAKRAQSVRDYLAARGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVLN
AGGA
>Mature_164_residues
MRFLRLARGFRFAALFGFALALAACANNPNQNAAGAGGAGGPPGSPQEFVVAVGDRVFFESDQTDLTPQARATLDRQAQW
LQQWNRYTFTIEGHADERGTREYNIALGAKRAQSVRDYLAARGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVLN
AGGA

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=175, Percent_Identity=34.8571428571429, Blast_Score=103, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17880; Mature: 17880

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLRLARGFRFAALFGFALALAACANNPNQNAAGAGGAGGPPGSPQEFVVAVGDRVFFE
CCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE
SDQTDLTPQARATLDRQAQWLQQWNRYTFTIEGHADERGTREYNIALGAKRAQSVRDYLA
CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHH
ARGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVLNAGGA
HCCCCHHHHHHHCCCCCCCEEEECCCHHCCCCCCEEEEEECCCC
>Mature Secondary Structure
MRFLRLARGFRFAALFGFALALAACANNPNQNAAGAGGAGGPPGSPQEFVVAVGDRVFFE
CCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE
SDQTDLTPQARATLDRQAQWLQQWNRYTFTIEGHADERGTREYNIALGAKRAQSVRDYLA
CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHH
ARGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVLNAGGA
HCCCCHHHHHHHCCCCCCCEEEECCCHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]