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The map label for this gene is ygfA [C]

Identifier: 154246989

GI number: 154246989

Start: 3399917

End: 3400504

Strand: Direct

Name: ygfA [C]

Synonym: Xaut_3060

Alternate gene names: 154246989

Gene position: 3399917-3400504 (Clockwise)

Preceding gene: 154246983

Following gene: 154246990

Centisome position: 64.04

GC content: 72.79

Gene sequence:

>588_bases
ATGGACATCGCCGCCGAAAAGAAACGCCTGCGCGCCCTCGCGCTCGGTCGTCGTGCGGCCATGGGCGAGGCGGGCCGAGC
CGCGGCCTCGCGCGCGGCCGCAAGCCATGCCCTCGCCGCCGCCGGCGCGGTTCAGGGGCGCGCCGTCGCTCTTTTCGCGC
CATTCCGGGACGAGATCGACACCGCGCCGCTGGCCGACGCCCTGCGCGAGGCCGGAGCGATCCTCGCCCTTCCCGTCATC
ATCGCCCGCGACCAGCCGCTCCTGTTCCGCCGCTGGGATCAGGACACGCCGCTCGTCCCCACGGGCGCCTTCCGCATTCC
CGAGCCGGGGCCGGAGGCGCCGGAGATCATCCCCGAACTGCTTCTGGTGCCGCTGGCCGCCTTCGACCGGCGCGGCTTCC
GCATCGGCTATGGGGCCGGCTTCTACGACCGCACCCTCGCCCTGCTGCGGGCGCAGCGGCCGGTGCGCGCCATCGGCTTT
GCCTTTGCGTGCCAGGAAGTGGACCAGGTGCCCGTCGAGACCCATGACGAGCCGGTGGACATGATGGTAACGGATATCGA
AGCTTGGGCCGTCGGCCCGCGCGCCTGA

Upstream 100 bases:

>100_bases
CTACGTTGTAGGTTCCCGGGATCGAACTCCGACGGCTTCTGTGGCTCCGCACGTTTTCTGACAAAGCCGACTTCTTCTGA
CAAAGCCGACTTCGCCCCTC

Downstream 100 bases:

>100_bases
TCCGGCCCCGGCCCGCCGCCATGGGACCCCGCTGCTCATTGGACCCTTCTGAATGCGTATCCTGTTCCTTGGTGATGTGG
TCGGCCGTCCCGGCCGGGAA

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MDIAAEKKRLRALALGRRAAMGEAGRAAASRAAASHALAAAGAVQGRAVALFAPFRDEIDTAPLADALREAGAILALPVI
IARDQPLLFRRWDQDTPLVPTGAFRIPEPGPEAPEIIPELLLVPLAAFDRRGFRIGYGAGFYDRTLALLRAQRPVRAIGF
AFACQEVDQVPVETHDEPVDMMVTDIEAWAVGPRA

Sequences:

>Translated_195_residues
MDIAAEKKRLRALALGRRAAMGEAGRAAASRAAASHALAAAGAVQGRAVALFAPFRDEIDTAPLADALREAGAILALPVI
IARDQPLLFRRWDQDTPLVPTGAFRIPEPGPEAPEIIPELLLVPLAAFDRRGFRIGYGAGFYDRTLALLRAQRPVRAIGF
AFACQEVDQVPVETHDEPVDMMVTDIEAWAVGPRA
>Mature_195_residues
MDIAAEKKRLRALALGRRAAMGEAGRAAASRAAASHALAAAGAVQGRAVALFAPFRDEIDTAPLADALREAGAILALPVI
IARDQPLLFRRWDQDTPLVPTGAFRIPEPGPEAPEIIPELLLVPLAAFDRRGFRIGYGAGFYDRTLALLRAQRPVRAIGF
AFACQEVDQVPVETHDEPVDMMVTDIEAWAVGPRA

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=178, Percent_Identity=33.7078651685393, Blast_Score=94, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 20926; Mature: 20926

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIAAEKKRLRALALGRRAAMGEAGRAAASRAAASHALAAAGAVQGRAVALFAPFRDEID
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCC
TAPLADALREAGAILALPVIIARDQPLLFRRWDQDTPLVPTGAFRIPEPGPEAPEIIPEL
CCHHHHHHHHCCCEEEEHEEEECCCCCEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHH
LLVPLAAFDRRGFRIGYGAGFYDRTLALLRAQRPVRAIGFAFACQEVDQVPVETHDEPVD
HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
MMVTDIEAWAVGPRA
HEEEHHHHHCCCCCC
>Mature Secondary Structure
MDIAAEKKRLRALALGRRAAMGEAGRAAASRAAASHALAAAGAVQGRAVALFAPFRDEID
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCC
TAPLADALREAGAILALPVIIARDQPLLFRRWDQDTPLVPTGAFRIPEPGPEAPEIIPEL
CCHHHHHHHHCCCEEEEHEEEECCCCCEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHH
LLVPLAAFDRRGFRIGYGAGFYDRTLALLRAQRPVRAIGFAFACQEVDQVPVETHDEPVD
HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
MMVTDIEAWAVGPRA
HEEEHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]