| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154246964
Identifier: 154246964
GI number: 154246964
Start: 3370630
End: 3372804
Strand: Reverse
Name: 154246964
Synonym: Xaut_3035
Alternate gene names: NA
Gene position: 3372804-3370630 (Counterclockwise)
Preceding gene: 154246965
Following gene: 154246963
Centisome position: 63.53
GC content: 62.76
Gene sequence:
>2175_bases ATGAAGGGATTGTCGCCAGCAGATTCCAACTTCCGGCAACTCGATCAGCGCCCGGTTCTTGCAACCGCTCCGTTGAAGCC TGGGTTTGATCGGGATTCCCTCTCTCGCTACGGCGATCCAAGCTGGGATCTTGGACCGGCCGTGTTTCGTGAGAACGCCC GCCGCTGTCACGTCACCGTGCATTTCACGTCGGTCGAGGACGTGGGTGTCCGCGAGGCACTGCGCGAACTTCTCTATGCC CGGCTCAACGTCGATCTGCCCGGTCACCGCAAGATACTTCCTCCAGGAAGCGTCCGGCAGATGTTCAACCGCGCGCGGCG CTTCTTCGATTTCGTGCGCGATGAACTTGGCGTTGTCGATCTACACCGGGTCGACCAGTCCCTTCTGGACCGATATGCCC GCCATCTCAGGGATGATCGTACCCGTCGCCCGATCATCGTCGCTCACTTGCTGGAGATCCCTTTCGACCTCCATGTCTTG CGGGATTATCTTCCCTCTGGCGGCCTGGCATTCCAACCTTGGGCCGGACGCGCACCTGCGCGCGTCGCGGGCTATCGTCA CGTTCGTGAGAACCGGACGCCGCGTATTCCTGAACCAATCATATCCCCGCTGCTGTCCTGGTCGATCCGGTACATCACCG AGTTTGCTGCCGATATCTTCACGGCCCGCGAGGAGATGGATTGTCTCGAAGCGCATCGCGCCATGCTTATCGAGCGGGAC AGCACCCTCGACCGTCATGGCCGACGGCGCGAGCAGCGCAACCGGCTTGAGGATTATTTCGCCCGGCTTCGCAGTGAAGG TCGCGGGGTTCCGATCTGGGGCACCGCCCATAATGGCACCTTTCTCCGGCACCCGGCGACGGGGGAGTTGTCGCCACCTG TCAACGCCCACCTGATTCATCTGCATATCGGCATCGACACGCAAGTCGATCCGAAGATGCACATTCAACTCGCGGGTGGT GCTCCACGCGAGATCAGAGCTGCCGTGCTTGAACTCGGTGTCGAGACCGGCGGTATGGATACGCTGATCGCCATTCTGCC CGAGACCGGTAAGCCCTGGCGGCCTCGTTTCGACGCCAAGACTCTCGCGGCGGAAGAGCGCATGCTGCAATCGGCGGCCT ATATCGTCTGCGCCTATCTGACCGGCATGCGGGACTGCGAAGTCCAGGCGATGCAGCGTGGGTGTCTTTCCCTGGCGCGC AGCGAAGACGGCATGATCATGCGCCACCGCGTGCGATCCGTCGCTTATAAAGGCAAGTCCGCCCGGGGTGAGCCTGCCGA GTGGGTCACCATCGAACCTGTCGCCAGAGCTGTCGAGGTTCTGGAACGCCTGTCGTTCCGAGCCGCATCCGCCCGTGGGC TGCCAACACTCTGGCCGGTACTCGCTGCCAAAACGGTTTGCAAGGACCACCTCTCCGCCGAGATCGTCCGTCAACTCAAT CACTTCCGCGACCACCTCAACGACCTGTTCGGCACCCCGGACACGCCGGCGGTCCCTAATGGGCCTGGTGATCAGCCTTG GCGGATCACGACACGCCAGTTCAGGCGCACGATTGCATGGCACATCGCCAACCGTCCGTTCGGCACCATCGCCGGCATGA TCCAGTACAAGCATGCCTCCGTCGCGGCGTTCGAAGGTTATGCCGGCTCCAGCCGATCCGGCTTTCGGGCCGAAGTCGAG AGCCAGCGTAGTCTCGGCCAGCTCGATGACCTGTTGATCTATTTCGACGAGCGGCAGGCCGGGGCCAAGCTGTCCGGGCC TGCGGCGGCACGTATCGCGAAGACGCTCGACAGCGTATCGGACCATCTCGGACCGCTTCCGGCCATGATCGCTGATCGTG CCCGACTGCGAACCATGCTCGCGAGCCTCGCACGGACCTTGCATGTCGGCGTGCTGGCCGATTGCTTCTTCGATCCCGGC ACGGCCGTCTGCCTGAAGCAGGCCACCGGAGCCAAAGGTCCGCTGACCGCACTCTGCCAGCCGACCCTCTGCCCAAATGC CTGCATCACCTCCATGCACCGGCCAGCATGGGCGCGGTCCGCGCAGGAGGCCGCAGACCTGTTGAAGGAGAAGCGGCTGT CCACGCTTCAACGAAGCATCCTTCAGCAGAATCTTGATCGAGCGAAGACGGTCCTCGACAGCATAGACAGGGACCAGTCC GCGCCCGGCTCCTGA
Upstream 100 bases:
>100_bases TTGCCGGGCAGGTTCTGCCGGCATTTCCCGAGAGCATGGTTGCCGCAGCCCGCCGTGAGGCGGAAGTGCATGCGCTTTAT CTGCCGCCGGAGGCCCGGCA
Downstream 100 bases:
>100_bases GGGGATCTGGGTGCTCCTTCGCCGGTGGCCCGCCCGGCGTGCTCGGAGCGCGCGATGCCCGACGCATCCGCGCAACGGCT GACGCCGTCCTCCGCTCGCG
Product: phage integrase family protein
Products: NA
Alternate protein names: Phage Integrase; Integrase Family Protein; Phage Integrase Family Domain-Containing Protein; Phage Integrase Family Domain Protein; Orf_Bo
Number of amino acids: Translated: 724; Mature: 724
Protein sequence:
>724_residues MKGLSPADSNFRQLDQRPVLATAPLKPGFDRDSLSRYGDPSWDLGPAVFRENARRCHVTVHFTSVEDVGVREALRELLYA RLNVDLPGHRKILPPGSVRQMFNRARRFFDFVRDELGVVDLHRVDQSLLDRYARHLRDDRTRRPIIVAHLLEIPFDLHVL RDYLPSGGLAFQPWAGRAPARVAGYRHVRENRTPRIPEPIISPLLSWSIRYITEFAADIFTAREEMDCLEAHRAMLIERD STLDRHGRRREQRNRLEDYFARLRSEGRGVPIWGTAHNGTFLRHPATGELSPPVNAHLIHLHIGIDTQVDPKMHIQLAGG APREIRAAVLELGVETGGMDTLIAILPETGKPWRPRFDAKTLAAEERMLQSAAYIVCAYLTGMRDCEVQAMQRGCLSLAR SEDGMIMRHRVRSVAYKGKSARGEPAEWVTIEPVARAVEVLERLSFRAASARGLPTLWPVLAAKTVCKDHLSAEIVRQLN HFRDHLNDLFGTPDTPAVPNGPGDQPWRITTRQFRRTIAWHIANRPFGTIAGMIQYKHASVAAFEGYAGSSRSGFRAEVE SQRSLGQLDDLLIYFDERQAGAKLSGPAAARIAKTLDSVSDHLGPLPAMIADRARLRTMLASLARTLHVGVLADCFFDPG TAVCLKQATGAKGPLTALCQPTLCPNACITSMHRPAWARSAQEAADLLKEKRLSTLQRSILQQNLDRAKTVLDSIDRDQS APGS
Sequences:
>Translated_724_residues MKGLSPADSNFRQLDQRPVLATAPLKPGFDRDSLSRYGDPSWDLGPAVFRENARRCHVTVHFTSVEDVGVREALRELLYA RLNVDLPGHRKILPPGSVRQMFNRARRFFDFVRDELGVVDLHRVDQSLLDRYARHLRDDRTRRPIIVAHLLEIPFDLHVL RDYLPSGGLAFQPWAGRAPARVAGYRHVRENRTPRIPEPIISPLLSWSIRYITEFAADIFTAREEMDCLEAHRAMLIERD STLDRHGRRREQRNRLEDYFARLRSEGRGVPIWGTAHNGTFLRHPATGELSPPVNAHLIHLHIGIDTQVDPKMHIQLAGG APREIRAAVLELGVETGGMDTLIAILPETGKPWRPRFDAKTLAAEERMLQSAAYIVCAYLTGMRDCEVQAMQRGCLSLAR SEDGMIMRHRVRSVAYKGKSARGEPAEWVTIEPVARAVEVLERLSFRAASARGLPTLWPVLAAKTVCKDHLSAEIVRQLN HFRDHLNDLFGTPDTPAVPNGPGDQPWRITTRQFRRTIAWHIANRPFGTIAGMIQYKHASVAAFEGYAGSSRSGFRAEVE SQRSLGQLDDLLIYFDERQAGAKLSGPAAARIAKTLDSVSDHLGPLPAMIADRARLRTMLASLARTLHVGVLADCFFDPG TAVCLKQATGAKGPLTALCQPTLCPNACITSMHRPAWARSAQEAADLLKEKRLSTLQRSILQQNLDRAKTVLDSIDRDQS APGS >Mature_724_residues MKGLSPADSNFRQLDQRPVLATAPLKPGFDRDSLSRYGDPSWDLGPAVFRENARRCHVTVHFTSVEDVGVREALRELLYA RLNVDLPGHRKILPPGSVRQMFNRARRFFDFVRDELGVVDLHRVDQSLLDRYARHLRDDRTRRPIIVAHLLEIPFDLHVL RDYLPSGGLAFQPWAGRAPARVAGYRHVRENRTPRIPEPIISPLLSWSIRYITEFAADIFTAREEMDCLEAHRAMLIERD STLDRHGRRREQRNRLEDYFARLRSEGRGVPIWGTAHNGTFLRHPATGELSPPVNAHLIHLHIGIDTQVDPKMHIQLAGG APREIRAAVLELGVETGGMDTLIAILPETGKPWRPRFDAKTLAAEERMLQSAAYIVCAYLTGMRDCEVQAMQRGCLSLAR SEDGMIMRHRVRSVAYKGKSARGEPAEWVTIEPVARAVEVLERLSFRAASARGLPTLWPVLAAKTVCKDHLSAEIVRQLN HFRDHLNDLFGTPDTPAVPNGPGDQPWRITTRQFRRTIAWHIANRPFGTIAGMIQYKHASVAAFEGYAGSSRSGFRAEVE SQRSLGQLDDLLIYFDERQAGAKLSGPAAARIAKTLDSVSDHLGPLPAMIADRARLRTMLASLARTLHVGVLADCFFDPG TAVCLKQATGAKGPLTALCQPTLCPNACITSMHRPAWARSAQEAADLLKEKRLSTLQRSILQQNLDRAKTVLDSIDRDQS APGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80911; Mature: 80911
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLSPADSNFRQLDQRPVLATAPLKPGFDRDSLSRYGDPSWDLGPAVFRENARRCHVTV CCCCCCCCCHHHHHCCCCCEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEEE HFTSVEDVGVREALRELLYARLNVDLPGHRKILPPGSVRQMFNRARRFFDFVRDELGVVD EEECCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH LHRVDQSLLDRYARHLRDDRTRRPIIVAHLLEIPFDLHVLRDYLPSGGLAFQPWAGRAPA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCH RVAGYRHVRENRTPRIPEPIISPLLSWSIRYITEFAADIFTAREEMDCLEAHRAMLIERD HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC STLDRHGRRREQRNRLEDYFARLRSEGRGVPIWGTAHNGTFLRHPATGELSPPVNAHLIH CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCCCCCCCCEEEEE LHIGIDTQVDPKMHIQLAGGAPREIRAAVLELGVETGGMDTLIAILPETGKPWRPRFDAK EEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCCCCHH TLAAEERMLQSAAYIVCAYLTGMRDCEVQAMQRGCLSLARSEDGMIMRHRVRSVAYKGKS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC ARGEPAEWVTIEPVARAVEVLERLSFRAASARGLPTLWPVLAAKTVCKDHLSAEIVRQLN CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HFRDHLNDLFGTPDTPAVPNGPGDQPWRITTRQFRRTIAWHIANRPFGTIAGMIQYKHAS HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHH VAAFEGYAGSSRSGFRAEVESQRSLGQLDDLLIYFDERQAGAKLSGPAAARIAKTLDSVS HEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHH DHLGPLPAMIADRARLRTMLASLARTLHVGVLADCFFDPGTAVCLKQATGAKGPLTALCQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHCC PTLCPNACITSMHRPAWARSAQEAADLLKEKRLSTLQRSILQQNLDRAKTVLDSIDRDQS CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC APGS CCCC >Mature Secondary Structure MKGLSPADSNFRQLDQRPVLATAPLKPGFDRDSLSRYGDPSWDLGPAVFRENARRCHVTV CCCCCCCCCHHHHHCCCCCEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEEE HFTSVEDVGVREALRELLYARLNVDLPGHRKILPPGSVRQMFNRARRFFDFVRDELGVVD EEECCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH LHRVDQSLLDRYARHLRDDRTRRPIIVAHLLEIPFDLHVLRDYLPSGGLAFQPWAGRAPA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCH RVAGYRHVRENRTPRIPEPIISPLLSWSIRYITEFAADIFTAREEMDCLEAHRAMLIERD HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC STLDRHGRRREQRNRLEDYFARLRSEGRGVPIWGTAHNGTFLRHPATGELSPPVNAHLIH CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCCCCCCCCEEEEE LHIGIDTQVDPKMHIQLAGGAPREIRAAVLELGVETGGMDTLIAILPETGKPWRPRFDAK EEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCCCCHH TLAAEERMLQSAAYIVCAYLTGMRDCEVQAMQRGCLSLARSEDGMIMRHRVRSVAYKGKS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC ARGEPAEWVTIEPVARAVEVLERLSFRAASARGLPTLWPVLAAKTVCKDHLSAEIVRQLN CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HFRDHLNDLFGTPDTPAVPNGPGDQPWRITTRQFRRTIAWHIANRPFGTIAGMIQYKHAS HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHH VAAFEGYAGSSRSGFRAEVESQRSLGQLDDLLIYFDERQAGAKLSGPAAARIAKTLDSVS HEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHH DHLGPLPAMIADRARLRTMLASLARTLHVGVLADCFFDPGTAVCLKQATGAKGPLTALCQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHCC PTLCPNACITSMHRPAWARSAQEAADLLKEKRLSTLQRSILQQNLDRAKTVLDSIDRDQS CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC APGS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA