| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154246946
Identifier: 154246946
GI number: 154246946
Start: 3354163
End: 3354696
Strand: Reverse
Name: 154246946
Synonym: Xaut_3017
Alternate gene names: NA
Gene position: 3354696-3354163 (Counterclockwise)
Preceding gene: 154246947
Following gene: 154246945
Centisome position: 63.19
GC content: 65.36
Gene sequence:
>534_bases TTGCCCGAAGACGACACGAGCACCCTCTTTCTGGGGTTAGCGCCCGCAGGTCTGACTGCGGACGCCGTACTGCCGCCGAC GTTCGAGACCGCCGGTCGCATTGCAGACGATAGCGAAGACGTCCTTCTCTACGATCTCGGCAACGGCCAGCGCGTCCAGC TCGTCATCGAACCGGACGCGATGCTCGGCCAGCCGCTTGCCGCCATCATTCCGCTCGATCGGGACGGGCTCGACCGGCTC GAATCCCTTCGCCGCCTGCTGGCCGCCCTTCATGGCCGGACGGTTCCACCGGATACACGGCTGACGCGGCAACAACGCCT GCGATTGCGCAGGATGTTGCAGTGCTTCGATGGCCACCGCGATGGCGCGACGCAGAGGGAGATCGCGCAGGTCGTGTTCC ACATCGCCCGACTCGATCGCCAAGAATGGCAGGACGCTTCCGCCCGTCACACCATCAAATCCCTGTTGCGGGATGCGCGC GCCATGATCGCCGGCGGCTATCGCGCCTTGCTCCGACATCACCGCCAGAACTGA
Upstream 100 bases:
>100_bases ACCGACGTCCGGACGCTGACCGACAAGATCCGGCGGCGGTGGGGGTTGCGATTTCCCCGTCGACCCGCTGGAGCCTCCAT CTGAAGCCCACATCGCTTGG
Downstream 100 bases:
>100_bases CCGCGCCGGCACCGTAAGCGGTGGGCGATTTCATACCCCCTGACTTCGCCCTGCATCCCGCCGGTCCTGCTTCGCCATCG TGGCCTTCGTCCGCCGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPEDDTSTLFLGLAPAGLTADAVLPPTFETAGRIADDSEDVLLYDLGNGQRVQLVIEPDAMLGQPLAAIIPLDRDGLDRL ESLRRLLAALHGRTVPPDTRLTRQQRLRLRRMLQCFDGHRDGATQREIAQVVFHIARLDRQEWQDASARHTIKSLLRDAR AMIAGGYRALLRHHRQN
Sequences:
>Translated_177_residues MPEDDTSTLFLGLAPAGLTADAVLPPTFETAGRIADDSEDVLLYDLGNGQRVQLVIEPDAMLGQPLAAIIPLDRDGLDRL ESLRRLLAALHGRTVPPDTRLTRQQRLRLRRMLQCFDGHRDGATQREIAQVVFHIARLDRQEWQDASARHTIKSLLRDAR AMIAGGYRALLRHHRQN >Mature_176_residues PEDDTSTLFLGLAPAGLTADAVLPPTFETAGRIADDSEDVLLYDLGNGQRVQLVIEPDAMLGQPLAAIIPLDRDGLDRLE SLRRLLAALHGRTVPPDTRLTRQQRLRLRRMLQCFDGHRDGATQREIAQVVFHIARLDRQEWQDASARHTIKSLLRDARA MIAGGYRALLRHHRQN
Specific function: Unknown
COG id: COG5419
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19870; Mature: 19739
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEDDTSTLFLGLAPAGLTADAVLPPTFETAGRIADDSEDVLLYDLGNGQRVQLVIEPDA CCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCH MLGQPLAAIIPLDRDGLDRLESLRRLLAALHGRTVPPDTRLTRQQRLRLRRMLQCFDGHR HHCCCHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC DGATQREIAQVVFHIARLDRQEWQDASARHTIKSLLRDARAMIAGGYRALLRHHRQN CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PEDDTSTLFLGLAPAGLTADAVLPPTFETAGRIADDSEDVLLYDLGNGQRVQLVIEPDA CCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCH MLGQPLAAIIPLDRDGLDRLESLRRLLAALHGRTVPPDTRLTRQQRLRLRRMLQCFDGHR HHCCCHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC DGATQREIAQVVFHIARLDRQEWQDASARHTIKSLLRDARAMIAGGYRALLRHHRQN CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA