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The map label for this gene is trbB [H]

Identifier: 154246933

GI number: 154246933

Start: 3341734

End: 3342762

Strand: Reverse

Name: trbB [H]

Synonym: Xaut_3004

Alternate gene names: 154246933

Gene position: 3342762-3341734 (Counterclockwise)

Preceding gene: 154246934

Following gene: 154246932

Centisome position: 62.96

GC content: 70.36

Gene sequence:

>1029_bases
ATGGCGATTTCTCAGCACAATTCAGAAGGGCTGGCGCGTGGCGCACGGATGCTGCGCACGGCGCTCGGTCCCGCCATCGC
CCGCTTCATGGAAGACGCCTCCGTCGTCGAGGTGATGCTGAACCCCGACGGGCGTATCTGGATCGACCGGCTCGCCGAAG
GGCTGGCCGACACGGGCGAGCGGCTGTCTCCCGCCAACGGCGAGCGCATCGTGCGCCTGGTCGCGCACCATGTCGGCGCC
GAAGTCCACACCGGCAGCCCGCGTGTCTCGGCCGAGTTGCCCGAGACGGGGGAGCGGTTCGAGGGGTTGTTGCCCCCGGT
GGTCGCGGCCCCGGCCTTCGCCATCCGCAAGCCCGCCGTCGCCGTGTTCACGCTCGACGATTATGTCCGCGCGGGGATCA
TGTCCGTCACGCAGGCCGAGGCGCTGCGGGCCGGCGTCGCTACCCGCGCCAACATTCTTGTCGCCGGCGGCACCTCGACC
GGGAAGACGACGCTGACCAATGCGTTGTTGGCCGAGGTAGCGAAGACCTCCGATCGCGTCGTCATCATCGAAGACACGCG
CGAGCTGCAATGCGCCGCGCCCAACCTCGTCGCCATGCGGACCAAGGATGGCGTCGCCTCGCTCTCCGATCTCGTCCGGT
CCTCGCTGCGCCTGCGCCCCGACCGCATCCCGATCGGCGAGGTGCGTGGCGCCGAGGCGCTCGACCTCCTCAAAGCCTGG
GGCACCGGCCATCCCGGCGGCGTCGGCACGATTCACGCCGGCAGCGCCATCGGCGCGCTGCGGCGGATGGAACAGCTCAT
CCAGGAAGCCGTCGTCACCGTCCCGCGCGCGCTGATCGCTGAAACGATCGACCTCGTAGCCGTGCTCTCCGGCCGCGGCT
CGGCACGCCGCCTCTCCGAACTCGTCCGCGTCGAGGGCCTCGGCCCGGACGGCGATTACCGCGTCACGCCCGCCGACGCA
CCAGCCTCCGGGAGCGACGACCGCGCGGCCTCTCTCAACCCCACCAGCCTTGAAGGAGAAACCCTGTGA

Upstream 100 bases:

>100_bases
TACTACGACCAACTCTTGTTGAACTGGCCTGATTTCTGGCTCTTTTAATCATCCCCGTCCGGGGAGCGTCTGAGCTTATC
CCGGTTGGATCGGGGATCAG

Downstream 100 bases:

>100_bases
TCCAACGCCTGCATCAAACGCGCCATCGCCTCGTCTCGGCGCTGTCCGTCGCCACGCTCTCCGTCGTGATGGCGGCGCCC
GCCCATGCCTCCGGTTCATC

Product: P-type conjugative transfer ATPase TrbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MAISQHNSEGLARGARMLRTALGPAIARFMEDASVVEVMLNPDGRIWIDRLAEGLADTGERLSPANGERIVRLVAHHVGA
EVHTGSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLDDYVRAGIMSVTQAEALRAGVATRANILVAGGTST
GKTTLTNALLAEVAKTSDRVVIIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGVGTIHAGSAIGALRRMEQLIQEAVVTVPRALIAETIDLVAVLSGRGSARRLSELVRVEGLGPDGDYRVTPADA
PASGSDDRAASLNPTSLEGETL

Sequences:

>Translated_342_residues
MAISQHNSEGLARGARMLRTALGPAIARFMEDASVVEVMLNPDGRIWIDRLAEGLADTGERLSPANGERIVRLVAHHVGA
EVHTGSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLDDYVRAGIMSVTQAEALRAGVATRANILVAGGTST
GKTTLTNALLAEVAKTSDRVVIIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGVGTIHAGSAIGALRRMEQLIQEAVVTVPRALIAETIDLVAVLSGRGSARRLSELVRVEGLGPDGDYRVTPADA
PASGSDDRAASLNPTSLEGETL
>Mature_341_residues
AISQHNSEGLARGARMLRTALGPAIARFMEDASVVEVMLNPDGRIWIDRLAEGLADTGERLSPANGERIVRLVAHHVGAE
VHTGSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLDDYVRAGIMSVTQAEALRAGVATRANILVAGGTSTG
KTTLTNALLAEVAKTSDRVVIIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAWG
TGHPGGVGTIHAGSAIGALRRMEQLIQEAVVTVPRALIAETIDLVAVLSGRGSARRLSELVRVEGLGPDGDYRVTPADAP
ASGSDDRAASLNPTSLEGETL

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 35848; Mature: 35717

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISQHNSEGLARGARMLRTALGPAIARFMEDASVVEVMLNPDGRIWIDRLAEGLADTGE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCC
RLSPANGERIVRLVAHHVGAEVHTGSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAV
CCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHCCCCHHHHCCHHHHCCCCE
AVFTLDDYVRAGIMSVTQAEALRAGVATRANILVAGGTSTGKTTLTNALLAEVAKTSDRV
EEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCE
VIIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
EEEECCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
GTGHPGGVGTIHAGSAIGALRRMEQLIQEAVVTVPRALIAETIDLVAVLSGRGSARRLSE
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LVRVEGLGPDGDYRVTPADAPASGSDDRAASLNPTSLEGETL
HHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AISQHNSEGLARGARMLRTALGPAIARFMEDASVVEVMLNPDGRIWIDRLAEGLADTGE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCC
RLSPANGERIVRLVAHHVGAEVHTGSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAV
CCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHCCCCHHHHCCHHHHCCCCE
AVFTLDDYVRAGIMSVTQAEALRAGVATRANILVAGGTSTGKTTLTNALLAEVAKTSDRV
EEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCE
VIIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
EEEECCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
GTGHPGGVGTIHAGSAIGALRRMEQLIQEAVVTVPRALIAETIDLVAVLSGRGSARRLSE
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LVRVEGLGPDGDYRVTPADAPASGSDDRAASLNPTSLEGETL
HHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]