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The map label for this gene is trbI [H]

Identifier: 154246924

GI number: 154246924

Start: 3333207

End: 3334463

Strand: Reverse

Name: trbI [H]

Synonym: Xaut_2995

Alternate gene names: 154246924

Gene position: 3334463-3333207 (Counterclockwise)

Preceding gene: 154246925

Following gene: 154246916

Centisome position: 62.81

GC content: 68.5

Gene sequence:

>1257_bases
GTGAACGACGAACGCGGTCCCGAAAAGGACGAAGGACAGGCGCTCGATAGGGCGCCGAGGCCGGAGGCGGCAGACGAAAA
TGACAGTCAGCCGCTCAAGGGCGACCCGGCCGCGCCGATGCGGCTGCGGCCCGAACCGCCGCGCGTCACCCGCCTGTCGC
GCAAGGTGCTGGCCGGTCTCGGCCTGGTCGCCAGCCTCGGCGTCGGCGGAGCGCTGGTCTATGCGCTCCAGACACGCAAC
GGCGGCAATCAGGGGCAGGAACTCTATTCCACCGACAACCGCACCACGCCGGACGGCCTGAACGGTCTGCCGAGGGACTA
TACCGCGGTTCCGAGACTCGGCCCGCCGCTCCCCGGCGATCTCGGCCGACCGATCCTCAACGCGCAGAACGGCGGCCAAC
TGGTTCCGACACCCGGCATAGCAAACCCGGCGCCCGCCGGCCCCAGCCCGGAGGAACAGCGCCGGGCACAGGAACTGGAG
GCGGCGCGCACTGCACGTCTGTTTTCAACCACGGAGACAAGACCCGCCAGCACGCCGACGGCGGCGCCGGCAGCCACACC
CGCCACAGACCTCACCAGCCTCGGCCTCGCACCACAGCCGGCGACGCCTTCGGCACAGGACCGCCAGCTCGCGTTCCTCA
ACCAGACGCCCGACAAGCGTACCGTCTCGCCCGATCGGATCGCGGCCCCCGCATCGGCCAATGTCCTTCAGGCCGGCGCG
GTGATCTCGGCGGCGCTCATCACCGGCATCCGCTCCGACCTTCCCGGCCAGATCACCGCGCAGGTGACGGAAAACATTTA
CGACAGCCCGACCGGGCGCATCCTGCTGATCCCACAGGGCACGCGCGTCATCGGGCAATATGACAGCGGCGTCGGCTTCG
GCCAGCGCCGCATCCTGCTGGTCTGGAACCGGCTGATCTTCCCGAACGGCCGCAGCATCGTTCTCGAGCGCCAGCCAGGC
GCAGACGCCGAAGGCTATGCCGGGCTTGAGGATGGCGTCGATTACCATTGGAGTGAACTGTTCAAGGCCGCAGCGCTGTC
GACCTTGCTCAGCGTCGGCGCCGAGGCGGGCTCATCCGGGCAGGAAAGCGACATCGTGCGCGCTCTGCGCAACGGCGCCT
CTGACAGCATCAGCCAGACCGGCCAACAGATCGTCCAGCGCCAGCTCAACATCGCGCCGACACTCACTATCCGGCCCGGC
TTTCCTGTCCGCGTCATCGTTACGCGCGACCTGGTGCTCGAACCCTACAGAGGCTGA

Upstream 100 bases:

>100_bases
TGATCGTGGACCGACTGTTCGCCGCCGCCGAGCTGCGCTTCGGCGCAGGTAAGAACCAGAAGCGCGTGCGTATCTCCCGC
ACCGATGGGAGGCCGGCATC

Downstream 100 bases:

>100_bases
TATGGCGAAGCTGAAACTTGGTCCGATCACTGACGACAAGCCGGTCAAGATCACGCTTGAGCTGCCCGCCAGGCTCCATC
GGGATCTCACCGCCTACGCG

Product: conjugation TrbI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNDERGPEKDEGQALDRAPRPEAADENDSQPLKGDPAAPMRLRPEPPRVTRLSRKVLAGLGLVASLGVGGALVYALQTRN
GGNQGQELYSTDNRTTPDGLNGLPRDYTAVPRLGPPLPGDLGRPILNAQNGGQLVPTPGIANPAPAGPSPEEQRRAQELE
AARTARLFSTTETRPASTPTAAPAATPATDLTSLGLAPQPATPSAQDRQLAFLNQTPDKRTVSPDRIAAPASANVLQAGA
VISAALITGIRSDLPGQITAQVTENIYDSPTGRILLIPQGTRVIGQYDSGVGFGQRRILLVWNRLIFPNGRSIVLERQPG
ADAEGYAGLEDGVDYHWSELFKAAALSTLLSVGAEAGSSGQESDIVRALRNGASDSISQTGQQIVQRQLNIAPTLTIRPG
FPVRVIVTRDLVLEPYRG

Sequences:

>Translated_418_residues
MNDERGPEKDEGQALDRAPRPEAADENDSQPLKGDPAAPMRLRPEPPRVTRLSRKVLAGLGLVASLGVGGALVYALQTRN
GGNQGQELYSTDNRTTPDGLNGLPRDYTAVPRLGPPLPGDLGRPILNAQNGGQLVPTPGIANPAPAGPSPEEQRRAQELE
AARTARLFSTTETRPASTPTAAPAATPATDLTSLGLAPQPATPSAQDRQLAFLNQTPDKRTVSPDRIAAPASANVLQAGA
VISAALITGIRSDLPGQITAQVTENIYDSPTGRILLIPQGTRVIGQYDSGVGFGQRRILLVWNRLIFPNGRSIVLERQPG
ADAEGYAGLEDGVDYHWSELFKAAALSTLLSVGAEAGSSGQESDIVRALRNGASDSISQTGQQIVQRQLNIAPTLTIRPG
FPVRVIVTRDLVLEPYRG
>Mature_418_residues
MNDERGPEKDEGQALDRAPRPEAADENDSQPLKGDPAAPMRLRPEPPRVTRLSRKVLAGLGLVASLGVGGALVYALQTRN
GGNQGQELYSTDNRTTPDGLNGLPRDYTAVPRLGPPLPGDLGRPILNAQNGGQLVPTPGIANPAPAGPSPEEQRRAQELE
AARTARLFSTTETRPASTPTAAPAATPATDLTSLGLAPQPATPSAQDRQLAFLNQTPDKRTVSPDRIAAPASANVLQAGA
VISAALITGIRSDLPGQITAQVTENIYDSPTGRILLIPQGTRVIGQYDSGVGFGQRRILLVWNRLIFPNGRSIVLERQPG
ADAEGYAGLEDGVDYHWSELFKAAALSTLLSVGAEAGSSGQESDIVRALRNGASDSISQTGQQIVQRQLNIAPTLTIRPG
FPVRVIVTRDLVLEPYRG

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 44121; Mature: 44121

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDERGPEKDEGQALDRAPRPEAADENDSQPLKGDPAAPMRLRPEPPRVTRLSRKVLAGL
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GLVASLGVGGALVYALQTRNGGNQGQELYSTDNRTTPDGLNGLPRDYTAVPRLGPPLPGD
HHHHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
LGRPILNAQNGGQLVPTPGIANPAPAGPSPEEQRRAQELEAARTARLFSTTETRPASTPT
HCCCEECCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AAPAATPATDLTSLGLAPQPATPSAQDRQLAFLNQTPDKRTVSPDRIAAPASANVLQAGA
CCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHH
VISAALITGIRSDLPGQITAQVTENIYDSPTGRILLIPQGTRVIGQYDSGVGFGQRRILL
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCEEEE
VWNRLIFPNGRSIVLERQPGADAEGYAGLEDGVDYHWSELFKAAALSTLLSVGAEAGSSG
EEHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
QESDIVRALRNGASDSISQTGQQIVQRQLNIAPTLTIRPGFPVRVIVTRDLVLEPYRG
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECEEECCCCC
>Mature Secondary Structure
MNDERGPEKDEGQALDRAPRPEAADENDSQPLKGDPAAPMRLRPEPPRVTRLSRKVLAGL
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GLVASLGVGGALVYALQTRNGGNQGQELYSTDNRTTPDGLNGLPRDYTAVPRLGPPLPGD
HHHHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
LGRPILNAQNGGQLVPTPGIANPAPAGPSPEEQRRAQELEAARTARLFSTTETRPASTPT
HCCCEECCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AAPAATPATDLTSLGLAPQPATPSAQDRQLAFLNQTPDKRTVSPDRIAAPASANVLQAGA
CCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHH
VISAALITGIRSDLPGQITAQVTENIYDSPTGRILLIPQGTRVIGQYDSGVGFGQRRILL
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCEEEE
VWNRLIFPNGRSIVLERQPGADAEGYAGLEDGVDYHWSELFKAAALSTLLSVGAEAGSSG
EEHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
QESDIVRALRNGASDSISQTGQQIVQRQLNIAPTLTIRPGFPVRVIVTRDLVLEPYRG
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]