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The map label for this gene is 154246859

Identifier: 154246859

GI number: 154246859

Start: 3247545

End: 3248789

Strand: Reverse

Name: 154246859

Synonym: Xaut_2924

Alternate gene names: NA

Gene position: 3248789-3247545 (Counterclockwise)

Preceding gene: 154246860

Following gene: 154246858

Centisome position: 61.19

GC content: 70.28

Gene sequence:

>1245_bases
ATGAGCGAACGCGTCTATGCCACCTACTGGATGGAGACCGGCGGCGACCCGGCCCGCACCGCCGAGGTCATCGCCGGCGA
GCAATCCAGCGGCACCTTCGTGGCGCTCGCCACCGAGACCGCGGAGCTGAAGGAACGCTCCGGCGCGCGCGTGGAGCGGC
TCGACATCCTCGACACGGCGGACATCCCCAGCCTGCCGGGCGGCATGGCCTCCGACCGCTACACCCGCGCCATTCTCGAA
CTGTCCTGGCCGGTGGAGAATTTCGGCCCCTCCCTGCCGAACCTCATGTCCACCATCGCCGGCAACCTGTTCGAACTGCA
CCAGGTCTCCGGCCTGCGCCTCATCGACCTGAAGCTGCCCCCGTCCTTCACCAATGCCTTCGCCGGCCCGGCCTTCGGCA
TCGCCGGCACCCGCAAGCTGGCCGGCGTGGCGCAGGGGCCGATCATCGGCACCATCATCAAGCCGTCCATCGGCCTCACG
CCGGAAGAGACCGCCCAGCAGGTGCGTGAGCTGATCGCCGGCGACATCGACTTCATCAAGGACGACGAACTCCAGGCTGA
CGGCGCCCGCTGCCCGTTCGAGGCGCGGGTGAAGGCGGTGATGCGGGTGGTGAACGACGCCGCCGACCGGCGCGGGCGCA
AGGTGATGGTGGCCTTCAACATCACCGGCGACCTCGACGAGATGCGCCGCCGCCACGACCTGGTGCTGGCCGAGGGCGGC
ACCTGCGTCATGGTCTGCCTGAATTCCATCGGCCTCGTGGGGGTGCGCGAGATCCGCCGCCACACTCAGTTGCCCATCCA
CGGCCATCGCGCCGGCTGGGGCTATCTCTACCGCTGCCCGTCGCTGGGATGGGACTATGCCCCCTGGCAGCAGCTGTGGC
GGCTCGCCGGCGTGGACCACCTGCATGTGAACGGGCTCGACAACAAGTTCTCGGAGGCCAACGCCAGCGTCATCGCCGCC
GCGCGGGCGGTGCTCTCGCCCCTCAACCATGCGGCGCCCATGGGAGCCATGCCGGTGTTTTCCTCCGGCCAGACCGGGCG
GCAGGCGGCCGAGACTTACGCGGCCATCGGCTGCGCCGACCTCATCCACACGGCAGGGGGTGGCATCTTCGGTCATCCGG
CGGGGGTGCCGGCGGGTGTCGAAGCCCTAAGGGCCGCCTGGCGCGCCGCCATGGCCGGCGCCAGCCTCGAGGACGAGGCA
ACCCGCAGCCCTGCCCTGCGCAGCGCCCTCGGGTTCTGGCGATGA

Upstream 100 bases:

>100_bases
AGGGACGCGGCCCCGCCCCGCCTCACGGCCCGGCCCCTCCCCTGCGTGGCAGCGGCGGCCGGGCCGCGCTACACACAGAC
GGCTGCAGGAATCCTCCGCC

Downstream 100 bases:

>100_bases
CGGCGGGCGCCTCTTCTGCCGCCTCATGGCCCGCCGGCCTGCTGCTGGCCTATTACGGCGACGACTTCACCGGCTCCACC
GATGCGCTGGAAGCCATCAC

Product: RuBisCO-like protein

Products: 3-phospho-D-glycerate; H+

Alternate protein names: RuBisCO-like protein [H]

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSERVYATYWMETGGDPARTAEVIAGEQSSGTFVALATETAELKERSGARVERLDILDTADIPSLPGGMASDRYTRAILE
LSWPVENFGPSLPNLMSTIAGNLFELHQVSGLRLIDLKLPPSFTNAFAGPAFGIAGTRKLAGVAQGPIIGTIIKPSIGLT
PEETAQQVRELIAGDIDFIKDDELQADGARCPFEARVKAVMRVVNDAADRRGRKVMVAFNITGDLDEMRRRHDLVLAEGG
TCVMVCLNSIGLVGVREIRRHTQLPIHGHRAGWGYLYRCPSLGWDYAPWQQLWRLAGVDHLHVNGLDNKFSEANASVIAA
ARAVLSPLNHAAPMGAMPVFSSGQTGRQAAETYAAIGCADLIHTAGGGIFGHPAGVPAGVEALRAAWRAAMAGASLEDEA
TRSPALRSALGFWR

Sequences:

>Translated_414_residues
MSERVYATYWMETGGDPARTAEVIAGEQSSGTFVALATETAELKERSGARVERLDILDTADIPSLPGGMASDRYTRAILE
LSWPVENFGPSLPNLMSTIAGNLFELHQVSGLRLIDLKLPPSFTNAFAGPAFGIAGTRKLAGVAQGPIIGTIIKPSIGLT
PEETAQQVRELIAGDIDFIKDDELQADGARCPFEARVKAVMRVVNDAADRRGRKVMVAFNITGDLDEMRRRHDLVLAEGG
TCVMVCLNSIGLVGVREIRRHTQLPIHGHRAGWGYLYRCPSLGWDYAPWQQLWRLAGVDHLHVNGLDNKFSEANASVIAA
ARAVLSPLNHAAPMGAMPVFSSGQTGRQAAETYAAIGCADLIHTAGGGIFGHPAGVPAGVEALRAAWRAAMAGASLEDEA
TRSPALRSALGFWR
>Mature_413_residues
SERVYATYWMETGGDPARTAEVIAGEQSSGTFVALATETAELKERSGARVERLDILDTADIPSLPGGMASDRYTRAILEL
SWPVENFGPSLPNLMSTIAGNLFELHQVSGLRLIDLKLPPSFTNAFAGPAFGIAGTRKLAGVAQGPIIGTIIKPSIGLTP
EETAQQVRELIAGDIDFIKDDELQADGARCPFEARVKAVMRVVNDAADRRGRKVMVAFNITGDLDEMRRRHDLVLAEGGT
CVMVCLNSIGLVGVREIRRHTQLPIHGHRAGWGYLYRCPSLGWDYAPWQQLWRLAGVDHLHVNGLDNKFSEANASVIAAA
RAVLSPLNHAAPMGAMPVFSSGQTGRQAAETYAAIGCADLIHTAGGGIFGHPAGVPAGVEALRAAWRAAMAGASLEDEAT
RSPALRSALGFWR

Specific function: May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity [H]

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type IV subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020878
- InterPro:   IPR000685
- InterPro:   IPR017443 [H]

Pfam domain/function: PF00016 RuBisCO_large [H]

EC number: 4.1.1.39

Molecular weight: Translated: 44329; Mature: 44198

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERVYATYWMETGGDPARTAEVIAGEQSSGTFVALATETAELKERSGARVERLDILDTA
CCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHCCCCEEEEECCCCC
DIPSLPGGMASDRYTRAILELSWPVENFGPSLPNLMSTIAGNLFELHQVSGLRLIDLKLP
CCCCCCCCCCCHHHHHHHHHEECCHHHHCCCHHHHHHHHHCCHHHHHHCCCEEEEEEECC
PSFTNAFAGPAFGIAGTRKLAGVAQGPIIGTIIKPSIGLTPEETAQQVRELIAGDIDFIK
CCHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC
DDELQADGARCPFEARVKAVMRVVNDAADRRGRKVMVAFNITGDLDEMRRRHDLVLAEGG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCEEEECCC
TCVMVCLNSIGLVGVREIRRHTQLPIHGHRAGWGYLYRCPSLGWDYAPWQQLWRLAGVDH
CEEEEHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCE
LHVNGLDNKFSEANASVIAAARAVLSPLNHAAPMGAMPVFSSGQTGRQAAETYAAIGCAD
EEECCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LIHTAGGGIFGHPAGVPAGVEALRAAWRAAMAGASLEDEATRSPALRSALGFWR
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCC
>Mature Secondary Structure 
SERVYATYWMETGGDPARTAEVIAGEQSSGTFVALATETAELKERSGARVERLDILDTA
CCCEEEEEEEECCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHCCCCEEEEECCCCC
DIPSLPGGMASDRYTRAILELSWPVENFGPSLPNLMSTIAGNLFELHQVSGLRLIDLKLP
CCCCCCCCCCCHHHHHHHHHEECCHHHHCCCHHHHHHHHHCCHHHHHHCCCEEEEEEECC
PSFTNAFAGPAFGIAGTRKLAGVAQGPIIGTIIKPSIGLTPEETAQQVRELIAGDIDFIK
CCHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC
DDELQADGARCPFEARVKAVMRVVNDAADRRGRKVMVAFNITGDLDEMRRRHDLVLAEGG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCEEEECCC
TCVMVCLNSIGLVGVREIRRHTQLPIHGHRAGWGYLYRCPSLGWDYAPWQQLWRLAGVDH
CEEEEHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCE
LHVNGLDNKFSEANASVIAAARAVLSPLNHAAPMGAMPVFSSGQTGRQAAETYAAIGCAD
EEECCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LIHTAGGGIFGHPAGVPAGVEALRAAWRAAMAGASLEDEATRSPALRSALGFWR
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-ribulose 1,5-bisphosphate; CO2; H2O

Specific reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]