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The map label for this gene is sodC [H]

Identifier: 154246857

GI number: 154246857

Start: 3245299

End: 3245850

Strand: Reverse

Name: sodC [H]

Synonym: Xaut_2922

Alternate gene names: 154246857

Gene position: 3245850-3245299 (Counterclockwise)

Preceding gene: 154246858

Following gene: 154246852

Centisome position: 61.14

GC content: 71.56

Gene sequence:

>552_bases
ATGGGCTCGAAACACTGGCTTCTCGCAGCTTCGATCCTGGTCGCCGGCGCGCCGGCCGCCCTGGCCCAGACCCCCGCACC
GGCACCCGCCGCCCCGACGCCCACCGTGGTGAAGGCGGACCTCGTCGGCAATAGCGGCAAGCCCATCGGCACCGCCACCG
CCACCGGCACGGACCGCGTCACCATCGTGCGCCTCGTGCTTCAGCCCGGTGCCATCCCGGCTGGCTGGCACGGCATCCAC
TTCCACGCCGTGGCCGACTGCTCCGACACCGAGAAGTTCCTGGCCTCGAAGGCCCATGTGAACCACGGTGGCAAGGCCCA
CGGCCTGCTCAATCCCAACGGTCCCGACGACGGCGACCTGCCCAACATCTTCGCCGTCGCCGATGGCTCGGTATCGGCCG
AGGTGACGAGCCCGGTGGGCCTCACCGGCGCCAACGGCCTGCTTGGCCCCACCGGATTCGCGCTGGTGGTTCACGCCGGC
CCGGACGACCACACCACCCAGCCCATCGGTGGTGCCGGCGCGCGCATCGCCTGCGCCGCGTTCAAGCCCTGA

Upstream 100 bases:

>100_bases
CCTCGCCATTTTCGAGACCTGCGGCCCGAGCCGGTGATATAAGCACGCCGCAGTTCGAGAAACGCGCGCCAAGCGCGCCG
CAGCACAAGGAAGGCACCCC

Downstream 100 bases:

>100_bases
GCCGAGCTAGAATCGAAAAACAGCCGCGCCGCCCGTGAGGCCGGCGCCGGCGGCGGCAATCAGCAGCACGTCGCCCGCGC
CATAGGCGCGGGTGGCGCGC

Product: copper/zinc binding superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MGSKHWLLAASILVAGAPAALAQTPAPAPAAPTPTVVKADLVGNSGKPIGTATATGTDRVTIVRLVLQPGAIPAGWHGIH
FHAVADCSDTEKFLASKAHVNHGGKAHGLLNPNGPDDGDLPNIFAVADGSVSAEVTSPVGLTGANGLLGPTGFALVVHAG
PDDHTTQPIGGAGARIACAAFKP

Sequences:

>Translated_183_residues
MGSKHWLLAASILVAGAPAALAQTPAPAPAAPTPTVVKADLVGNSGKPIGTATATGTDRVTIVRLVLQPGAIPAGWHGIH
FHAVADCSDTEKFLASKAHVNHGGKAHGLLNPNGPDDGDLPNIFAVADGSVSAEVTSPVGLTGANGLLGPTGFALVVHAG
PDDHTTQPIGGAGARIACAAFKP
>Mature_182_residues
GSKHWLLAASILVAGAPAALAQTPAPAPAAPTPTVVKADLVGNSGKPIGTATATGTDRVTIVRLVLQPGAIPAGWHGIHF
HAVADCSDTEKFLASKAHVNHGGKAHGLLNPNGPDDGDLPNIFAVADGSVSAEVTSPVGLTGANGLLGPTGFALVVHAGP
DDHTTQPIGGAGARIACAAFKP

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems. May function against extracytoplasmic toxic oxygen species [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 18039; Mature: 17907

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSKHWLLAASILVAGAPAALAQTPAPAPAAPTPTVVKADLVGNSGKPIGTATATGTDRV
CCCCHHHHEEHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCE
TIVRLVLQPGAIPAGWHGIHFHAVADCSDTEKFLASKAHVNHGGKAHGLLNPNGPDDGDL
EEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PNIFAVADGSVSAEVTSPVGLTGANGLLGPTGFALVVHAGPDDHTTQPIGGAGARIACAA
CCEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE
FKP
CCC
>Mature Secondary Structure 
GSKHWLLAASILVAGAPAALAQTPAPAPAAPTPTVVKADLVGNSGKPIGTATATGTDRV
CCCHHHHEEHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCE
TIVRLVLQPGAIPAGWHGIHFHAVADCSDTEKFLASKAHVNHGGKAHGLLNPNGPDDGDL
EEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PNIFAVADGSVSAEVTSPVGLTGANGLLGPTGFALVVHAGPDDHTTQPIGGAGARIACAA
CCEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE
FKP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2345128; 11259647; 7050107 [H]