| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is iorA [H]
Identifier: 154246852
GI number: 154246852
Start: 3240378
End: 3240839
Strand: Reverse
Name: iorA [H]
Synonym: Xaut_2917
Alternate gene names: 154246852
Gene position: 3240839-3240378 (Counterclockwise)
Preceding gene: 154246857
Following gene: 154246851
Centisome position: 61.05
GC content: 69.7
Gene sequence:
>462_bases ATGGCCGTCACACTCACAGTGAACGGACAGGCGCGCACCGTCGACGCCGATCCCGATACCCCGCTGCTCTGGGTCCTGCG CGACGAGCTTGATCTCGTCGGCACCAAGTTCGGCTGCGGCCAGGCCCTGTGCGGCGCCTGCACCGTGCATCTCGACGGCA CCCCGGTGAGGTCCTGCCAGACCGCGCTCGGCGATGTCGGCGACGGCAAGGTCGTCACCATCGAAGGCATCCAGGGCCGC GAGGCCGAGGCGGTCCGCGCCGCCTGGGTCAGCCTCGACGTGGTCCAGTGCGGCTATTGCCAGTCCGGGCAGATCATGTC CGCCGTGGCGCTGCTGGCCGAGAACAAGAAGCCTACCGATCCCGACATTGACGCGGCGATGGACGGCAATGTCTGCCGCT GCGCCACCTACCACCGCATCCGCGCCGCGATCCACGACGCGGCCCGCCGGCTGGAGGCCTGA
Upstream 100 bases:
>100_bases TCGGGGCGACGCCATGGCGCCTTTGAGGCGCGTCGCGTGCGCGCCTTCTTCTCCTATCAAGCACAGATGCGGCTGTGCCT CTCGCAACAACGAGGTACCC
Downstream 100 bases:
>100_bases TCCATGCACATGCTACAGAAGCTGGAGCCGGGCGTCGTGTCCGGCCTTGCCGCCGCGCTGTCCGGCGCGGCACAGACGCC GCTCTCCCGCCGCTTCGTCC
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MAVTLTVNGQARTVDADPDTPLLWVLRDELDLVGTKFGCGQALCGACTVHLDGTPVRSCQTALGDVGDGKVVTIEGIQGR EAEAVRAAWVSLDVVQCGYCQSGQIMSAVALLAENKKPTDPDIDAAMDGNVCRCATYHRIRAAIHDAARRLEA
Sequences:
>Translated_153_residues MAVTLTVNGQARTVDADPDTPLLWVLRDELDLVGTKFGCGQALCGACTVHLDGTPVRSCQTALGDVGDGKVVTIEGIQGR EAEAVRAAWVSLDVVQCGYCQSGQIMSAVALLAENKKPTDPDIDAAMDGNVCRCATYHRIRAAIHDAARRLEA >Mature_152_residues AVTLTVNGQARTVDADPDTPLLWVLRDELDLVGTKFGCGQALCGACTVHLDGTPVRSCQTALGDVGDGKVVTIEGIQGRE AEAVRAAWVSLDVVQCGYCQSGQIMSAVALLAENKKPTDPDIDAAMDGNVCRCATYHRIRAAIHDAARRLEA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1786480, Length=169, Percent_Identity=38.4615384615385, Blast_Score=108, Evalue=2e-25, Organism=Escherichia coli, GI1789232, Length=153, Percent_Identity=37.2549019607843, Blast_Score=87, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17539860, Length=156, Percent_Identity=34.6153846153846, Blast_Score=95, Evalue=1e-20, Organism=Caenorhabditis elegans, GI32566215, Length=157, Percent_Identity=34.3949044585987, Blast_Score=92, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17540638, Length=154, Percent_Identity=35.7142857142857, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI17737937, Length=147, Percent_Identity=36.0544217687075, Blast_Score=87, Evalue=3e-18, Organism=Drosophila melanogaster, GI24647201, Length=158, Percent_Identity=30.379746835443, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24647197, Length=164, Percent_Identity=29.2682926829268, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI24647195, Length=164, Percent_Identity=29.2682926829268, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI24647199, Length=158, Percent_Identity=30.379746835443, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI24647193, Length=164, Percent_Identity=30.4878048780488, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 16168; Mature: 16036
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTLTVNGQARTVDADPDTPLLWVLRDELDLVGTKFGCGQALCGACTVHLDGTPVRSCQ CEEEEEECCCEEEECCCCCCCEEEEEECCHHHHCCCCCCCCCCCCEEEEEECCCCCHHHH TALGDVGDGKVVTIEGIQGREAEAVRAAWVSLDVVQCGYCQSGQIMSAVALLAENKKPTD HHHCCCCCCEEEEEECCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCC PDIDAAMDGNVCRCATYHRIRAAIHDAARRLEA CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVTLTVNGQARTVDADPDTPLLWVLRDELDLVGTKFGCGQALCGACTVHLDGTPVRSCQ EEEEEECCCEEEECCCCCCCEEEEEECCHHHHCCCCCCCCCCCCEEEEEECCCCCHHHH TALGDVGDGKVVTIEGIQGREAEAVRAAWVSLDVVQCGYCQSGQIMSAVALLAENKKPTD HHHCCCCCCEEEEEECCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCC PDIDAAMDGNVCRCATYHRIRAAIHDAARRLEA CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]