| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154246847
Identifier: 154246847
GI number: 154246847
Start: 3234409
End: 3235572
Strand: Reverse
Name: 154246847
Synonym: Xaut_2912
Alternate gene names: NA
Gene position: 3235572-3234409 (Counterclockwise)
Preceding gene: 154246850
Following gene: 154246845
Centisome position: 60.95
GC content: 68.47
Gene sequence:
>1164_bases ATGAGCAAGTTCATCTGTGCCCATGCCGGCGATGCCAAATGGGAAATCGCCCTCGGGTCCTGCTGGGGCCAGGTCCGCTT TCAGCTTCAGAATGCGCCCAAGCCCAATCTGGGCTGGTGCTACCTCACCGACCATTACACCCAGGCGGCGGGCAACATCA TGGAGGCGCTGCGCGAGCACATGCCGGGGGTCCATTGGGTGGGCACGGTGGGTGTCGGCGTTGGCGCGGAAGGGGTGGAA TATTTCGACGAGCCGGCCATGGTGCTCATGCTGGCCGATCTGCCACCGGACTCCTTCAAGCTGTTTTCCAGCCCAAAGCC GCTGCAGGCGCTCCCGGAAGCCGGCTCGAACGGCTTCGAGGCCTTCACCGCCCTGGTCCATGCGGACGGCGGAAGCGCCG ACCTGCCGATCCAGCTCAAGGACCTGAGCGGGAAGACCACCACCGGCTACCTGTTCGGTGGCCTGTCCTCGGCGCGGAAC CAGCCCCTGTGCTTCGCCGACGAGGTGTTCCTCGGCGGGCTCTCCGGGGTGGCTTTCGGCCCTGAGGTTCCGGTGCTGTC CCGGGTGACCCAGGGCTGCCAGCCCGTCGGCCCCCAGCGCACCATCACCCGCGCCGAAGGCAATTATCTGGTGACCCTGG ACAAGGCCCGGGCCCTGGACTGCGTGCTGGAGGACCTGGGGCTGAGCCTCGACATCCCCGACCCGGAGTTGCGCAACGAA CTGGCCCAGACCCTCGCGGGGCTGATCGCCGCCGACGAGGACGTGTCCGCCAAGCCCGGCCAGTTCGGCACCAATACCGA GGTGCGCCATCTGCTGGGTGTCGGCCGCCAGAGCGGCGTCCTGGTGGTGGCGGAGCAGATCGCGGCGGGCATGAAGCTCG CCTTCTGCAAGCGTAACGCGGAGGCGGCGAAGCACGACCTGCTGCGCATCGTCGGCGAGGTCCGGGCCCAGGCGGAGGCC GCAGGCGGCATCAGGGGCGCCCTGTACATCAGCTGTTCCGGGCGGGGCGGCCCCCATTTCGGCCACCGCAACGCGGAATT CCAGATGGTCAGCGAGGCCCTGGGCCCGGTGCCCCTCATCGGCTTCTTCGCCGGCGGCGAGATCGCCCGCCACCATCTCT ACGGCTACACCGGGGTGCTGACGGTCTTTACCGGGGCGGCCTGA
Upstream 100 bases:
>100_bases CCCATGGCGATCCGCACCAGTTCATGACCGCTCCCCGCCTTCCGGCGGGCAGTGTGCACCGTCCCTTTCAGACCCACCCC TTTTGTGCAGATATCCTCAT
Downstream 100 bases:
>100_bases GAGCGGGGACGAAAATGATGACACCACAGCGGTTTCCAGCAAAACCGACCCCGGTTCTCGCGCCCGTGGAGGCCTGAGCA TGCCTGCGGCAGATCGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MSKFICAHAGDAKWEIALGSCWGQVRFQLQNAPKPNLGWCYLTDHYTQAAGNIMEALREHMPGVHWVGTVGVGVGAEGVE YFDEPAMVLMLADLPPDSFKLFSSPKPLQALPEAGSNGFEAFTALVHADGGSADLPIQLKDLSGKTTTGYLFGGLSSARN QPLCFADEVFLGGLSGVAFGPEVPVLSRVTQGCQPVGPQRTITRAEGNYLVTLDKARALDCVLEDLGLSLDIPDPELRNE LAQTLAGLIAADEDVSAKPGQFGTNTEVRHLLGVGRQSGVLVVAEQIAAGMKLAFCKRNAEAAKHDLLRIVGEVRAQAEA AGGIRGALYISCSGRGGPHFGHRNAEFQMVSEALGPVPLIGFFAGGEIARHHLYGYTGVLTVFTGAA
Sequences:
>Translated_387_residues MSKFICAHAGDAKWEIALGSCWGQVRFQLQNAPKPNLGWCYLTDHYTQAAGNIMEALREHMPGVHWVGTVGVGVGAEGVE YFDEPAMVLMLADLPPDSFKLFSSPKPLQALPEAGSNGFEAFTALVHADGGSADLPIQLKDLSGKTTTGYLFGGLSSARN QPLCFADEVFLGGLSGVAFGPEVPVLSRVTQGCQPVGPQRTITRAEGNYLVTLDKARALDCVLEDLGLSLDIPDPELRNE LAQTLAGLIAADEDVSAKPGQFGTNTEVRHLLGVGRQSGVLVVAEQIAAGMKLAFCKRNAEAAKHDLLRIVGEVRAQAEA AGGIRGALYISCSGRGGPHFGHRNAEFQMVSEALGPVPLIGFFAGGEIARHHLYGYTGVLTVFTGAA >Mature_386_residues SKFICAHAGDAKWEIALGSCWGQVRFQLQNAPKPNLGWCYLTDHYTQAAGNIMEALREHMPGVHWVGTVGVGVGAEGVEY FDEPAMVLMLADLPPDSFKLFSSPKPLQALPEAGSNGFEAFTALVHADGGSADLPIQLKDLSGKTTTGYLFGGLSSARNQ PLCFADEVFLGGLSGVAFGPEVPVLSRVTQGCQPVGPQRTITRAEGNYLVTLDKARALDCVLEDLGLSLDIPDPELRNEL AQTLAGLIAADEDVSAKPGQFGTNTEVRHLLGVGRQSGVLVVAEQIAAGMKLAFCKRNAEAAKHDLLRIVGEVRAQAEAA GGIRGALYISCSGRGGPHFGHRNAEFQMVSEALGPVPLIGFFAGGEIARHHLYGYTGVLTVFTGAA
Specific function: Unknown
COG id: COG4398
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0628c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019494 - InterPro: IPR013702 - InterPro: IPR016741 [H]
Pfam domain/function: PF08495 FIST; PF10442 FIST_C [H]
EC number: NA
Molecular weight: Translated: 40883; Mature: 40752
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFICAHAGDAKWEIALGSCWGQVRFQLQNAPKPNLGWCYLTDHYTQAAGNIMEALREH CCCEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHH MPGVHWVGTVGVGVGAEGVEYFDEPAMVLMLADLPPDSFKLFSSPKPLQALPEAGSNGFE CCCEEEEEEECCCCCCCCHHHHCCCEEEEEEECCCCCCHHHCCCCCCHHHCCCCCCCHHH AFTALVHADGGSADLPIQLKDLSGKTTTGYLFGGLSSARNQPLCFADEVFLGGLSGVAFG HEEEEEECCCCCCCCCEEEECCCCCCEEEEEEECHHHCCCCCCEEEHHHHHCCCCCCCCC PEVPVLSRVTQGCQPVGPQRTITRAEGNYLVTLDKARALDCVLEDLGLSLDIPDPELRNE CCCHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHCCCEECCCCHHHHHH LAQTLAGLIAADEDVSAKPGQFGTNTEVRHLLGVGRQSGVLVVAEQIAAGMKLAFCKRNA HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHCCCEEEEHHCCH EAAKHDLLRIVGEVRAQAEAAGGIRGALYISCSGRGGPHFGHRNAEFQMVSEALGPVPLI HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEE GFFAGGEIARHHLYGYTGVLTVFTGAA EEECCCHHHHHHHHHHHEEEHEEECCC >Mature Secondary Structure SKFICAHAGDAKWEIALGSCWGQVRFQLQNAPKPNLGWCYLTDHYTQAAGNIMEALREH CCEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHH MPGVHWVGTVGVGVGAEGVEYFDEPAMVLMLADLPPDSFKLFSSPKPLQALPEAGSNGFE CCCEEEEEEECCCCCCCCHHHHCCCEEEEEEECCCCCCHHHCCCCCCHHHCCCCCCCHHH AFTALVHADGGSADLPIQLKDLSGKTTTGYLFGGLSSARNQPLCFADEVFLGGLSGVAFG HEEEEEECCCCCCCCCEEEECCCCCCEEEEEEECHHHCCCCCCEEEHHHHHCCCCCCCCC PEVPVLSRVTQGCQPVGPQRTITRAEGNYLVTLDKARALDCVLEDLGLSLDIPDPELRNE CCCHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHCCCEECCCCHHHHHH LAQTLAGLIAADEDVSAKPGQFGTNTEVRHLLGVGRQSGVLVVAEQIAAGMKLAFCKRNA HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHCCCEEEEHHCCH EAAKHDLLRIVGEVRAQAEAAGGIRGALYISCSGRGGPHFGHRNAEFQMVSEALGPVPLI HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEE GFFAGGEIARHHLYGYTGVLTVFTGAA EEECCCHHHHHHHHHHHEEEHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]