| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is gor [H]
Identifier: 154246840
GI number: 154246840
Start: 3226638
End: 3227984
Strand: Direct
Name: gor [H]
Synonym: Xaut_2904
Alternate gene names: 154246840
Gene position: 3226638-3227984 (Clockwise)
Preceding gene: 154246839
Following gene: 154246846
Centisome position: 60.78
GC content: 63.77
Gene sequence:
>1347_bases ATGGCGGAGCAATACGACCTCGTAGTCATAGGAACCGGCACGGCTGCCATGGTCGCTGCCATGCGCGTGCGCGCTGCCGG CTGGAGTGTGGCGATCATCGACTACCGGCCTTTCGGCGGCACCTGCGCCCTACGCGGCTGCGACCCGAAAAAGATGCTTG TCGGCGGTGCCTCGGCCCTCGACCACGCCCGGCGCATGCGGGGCAACGGCGTTGCCGGCGACGTCCATATCGACTGGCCC GAACTGATTGCCTTCAAGCGCACCTTCACCGATCCAGTCCCTGAAAAACATGAACACCGCTACGATGAAAAGGGCATCCA TACGTACCGCGGGCACGCGCGCTTCACGGGCCGGAACAGCCTGACGGTGGACGGCGAGAGCCTTGAAGCCCGCCACGTCC TTATCGCTGCGGGTGCCGAGCCGATAAGGCTAGGGATTCCCGGTGAAGAGTACTTCGCCACCAACGAAGACTTCTTGGCC ATGGAGCGACTGCCACGCCGGATCGTGCTGGTTGGCGGCGGGTATATTGCGTCGGAGTTCTCCCACATCGCTGCGCGTGC GGGTGTGCAGGTGACGATTCTCCAGCGTGGCAAACGGATGCTTGGACACTTTGACCCGGACCTCGTGGGCTGGCTCATGG ACAAGTTCCGGGAGATCCGGGTGGATGTGCGCTTGCGGACCACGGTAAGCGCGATCGAGAAGGACCATGCGGGCTTTGTC GTCCGCGCTTCCTCAGAAGGCGGAGACGCGACCTTCGACGCCGACCTCGTTGTCCATTCGGCCGGCCGCGCGCCTGCGCT CGACGCGCTTGATCTTGAGGCCGGCGGCGTCGCCGCGGAGAAGGGCCGGCTCAAGCTGAATGAGTACCTGCAGAGCGTCT CTAACGCAGCCGTATATGCCGCCGGCGATGCGGCACAGGAGGGGCCGCCGCTGACTCCCGTCTCCAGCCACGACGCCAAG ATGGTCGCCGCTAACCTCCTGGAGGGCAATCGGCATAGACCCGACTATCGCGGCGTGCCAAGCGTCGCCTTCACGATCCC GCCGATCGCCGCCGTCGGGCTGAGCGAGGAACAAGCACGTCAGCAGGACCTGAAATTTCAGACGAAGTCCCAGAAGGCGT CCGACTGGTTTACGGCCCGCCAGGCCGTAGAGAAGACCTATGGCTTCAAGGTGATGGTGGAGGACGATACGGGGCGCATC ATCGGCGCTCATCTTGTCGGGCCGCACGCCGATGAAGTGATCAACCTGTTTGCCCTGGCGATCCGCCACGACCTGACGGC CGACAATCTGAAGACGACAATGTTCGCGTATCCCACTGGCGCCTCGGATATCGGCTACATGCTCTGA
Upstream 100 bases:
>100_bases TGACGAGCGCGACCCGGATAGGCACGCTGATGCCGCTTGCTCTCGCGGGAATCGGCGCCGCGTTCGGATGGGCGGCAGCA GGCATAAGTAGGAGAGACGA
Downstream 100 bases:
>100_bases ATGCTGGTATCAACGGCAAGCATGTCGCCGAGCGCCTTCAACTTGTTTGCAGCACCCCAAAGTCGTCGCAGGGAGATGGC GTGCAGGATCGCATTTTAGG
Product: pyridine nucleotide-disulfide oxidoreductase dimerisation region
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MAEQYDLVVIGTGTAAMVAAMRVRAAGWSVAIIDYRPFGGTCALRGCDPKKMLVGGASALDHARRMRGNGVAGDVHIDWP ELIAFKRTFTDPVPEKHEHRYDEKGIHTYRGHARFTGRNSLTVDGESLEARHVLIAAGAEPIRLGIPGEEYFATNEDFLA MERLPRRIVLVGGGYIASEFSHIAARAGVQVTILQRGKRMLGHFDPDLVGWLMDKFREIRVDVRLRTTVSAIEKDHAGFV VRASSEGGDATFDADLVVHSAGRAPALDALDLEAGGVAAEKGRLKLNEYLQSVSNAAVYAAGDAAQEGPPLTPVSSHDAK MVAANLLEGNRHRPDYRGVPSVAFTIPPIAAVGLSEEQARQQDLKFQTKSQKASDWFTARQAVEKTYGFKVMVEDDTGRI IGAHLVGPHADEVINLFALAIRHDLTADNLKTTMFAYPTGASDIGYML
Sequences:
>Translated_448_residues MAEQYDLVVIGTGTAAMVAAMRVRAAGWSVAIIDYRPFGGTCALRGCDPKKMLVGGASALDHARRMRGNGVAGDVHIDWP ELIAFKRTFTDPVPEKHEHRYDEKGIHTYRGHARFTGRNSLTVDGESLEARHVLIAAGAEPIRLGIPGEEYFATNEDFLA MERLPRRIVLVGGGYIASEFSHIAARAGVQVTILQRGKRMLGHFDPDLVGWLMDKFREIRVDVRLRTTVSAIEKDHAGFV VRASSEGGDATFDADLVVHSAGRAPALDALDLEAGGVAAEKGRLKLNEYLQSVSNAAVYAAGDAAQEGPPLTPVSSHDAK MVAANLLEGNRHRPDYRGVPSVAFTIPPIAAVGLSEEQARQQDLKFQTKSQKASDWFTARQAVEKTYGFKVMVEDDTGRI IGAHLVGPHADEVINLFALAIRHDLTADNLKTTMFAYPTGASDIGYML >Mature_447_residues AEQYDLVVIGTGTAAMVAAMRVRAAGWSVAIIDYRPFGGTCALRGCDPKKMLVGGASALDHARRMRGNGVAGDVHIDWPE LIAFKRTFTDPVPEKHEHRYDEKGIHTYRGHARFTGRNSLTVDGESLEARHVLIAAGAEPIRLGIPGEEYFATNEDFLAM ERLPRRIVLVGGGYIASEFSHIAARAGVQVTILQRGKRMLGHFDPDLVGWLMDKFREIRVDVRLRTTVSAIEKDHAGFVV RASSEGGDATFDADLVVHSAGRAPALDALDLEAGGVAAEKGRLKLNEYLQSVSNAAVYAAGDAAQEGPPLTPVSSHDAKM VAANLLEGNRHRPDYRGVPSVAFTIPPIAAVGLSEEQARQQDLKFQTKSQKASDWFTARQAVEKTYGFKVMVEDDTGRII GAHLVGPHADEVINLFALAIRHDLTADNLKTTMFAYPTGASDIGYML
Specific function: Maintains high levels of reduced glutathione in the cytosol [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=460, Percent_Identity=26.5217391304348, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI91199540, Length=457, Percent_Identity=25.601750547046, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI33519430, Length=424, Percent_Identity=26.6509433962264, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI33519428, Length=424, Percent_Identity=26.6509433962264, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI33519426, Length=424, Percent_Identity=26.6509433962264, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI148277065, Length=424, Percent_Identity=26.6509433962264, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI291045266, Length=423, Percent_Identity=27.4231678486998, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI148277071, Length=424, Percent_Identity=26.6509433962264, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI22035672, Length=471, Percent_Identity=26.1146496815287, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI291045268, Length=419, Percent_Identity=25.0596658711217, Blast_Score=100, Evalue=5e-21, Organism=Escherichia coli, GI1789915, Length=457, Percent_Identity=30.4157549234136, Blast_Score=189, Evalue=3e-49, Organism=Escherichia coli, GI1786307, Length=457, Percent_Identity=26.4770240700219, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI87081717, Length=455, Percent_Identity=29.010989010989, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI87082354, Length=469, Percent_Identity=24.9466950959488, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1789065, Length=253, Percent_Identity=28.4584980237154, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17557007, Length=475, Percent_Identity=28.8421052631579, Blast_Score=181, Evalue=5e-46, Organism=Caenorhabditis elegans, GI32565766, Length=453, Percent_Identity=25.60706401766, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71983429, Length=457, Percent_Identity=28.0087527352298, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI71983419, Length=457, Percent_Identity=28.0087527352298, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71982272, Length=480, Percent_Identity=24.375, Blast_Score=111, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6325166, Length=471, Percent_Identity=23.1422505307856, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6321091, Length=470, Percent_Identity=24.8936170212766, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6325240, Length=460, Percent_Identity=21.0869565217391, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24640549, Length=466, Percent_Identity=29.8283261802575, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24640553, Length=466, Percent_Identity=29.8283261802575, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24640551, Length=466, Percent_Identity=29.8283261802575, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI21358499, Length=455, Percent_Identity=27.2527472527473, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI17737741, Length=468, Percent_Identity=26.7094017094017, Blast_Score=137, Evalue=1e-32,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 48611; Mature: 48480
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQYDLVVIGTGTAAMVAAMRVRAAGWSVAIIDYRPFGGTCALRGCDPKKMLVGGASAL CCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCCHHEEECCHHHH DHARRMRGNGVAGDVHIDWPELIAFKRTFTDPVPEKHEHRYDEKGIHTYRGHARFTGRNS HHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEECCCEEEECCCE LTVDGESLEARHVLIAAGAEPIRLGIPGEEYFATNEDFLAMERLPRRIVLVGGGYIASEF EEECCCCCCEEEEEEEECCCEEEECCCCHHHCCCCCCHHHHHHCCCEEEEEECCHHHHHH SHIAARAGVQVTILQRGKRMLGHFDPDLVGWLMDKFREIRVDVRLRTTVSAIEKDHAGFV HHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEEEHHHHHHHCCCCCEE VRASSEGGDATFDADLVVHSAGRAPALDALDLEAGGVAAEKGRLKLNEYLQSVSNAAVYA EEECCCCCCCEEEEEEEEECCCCCCCCCEEECCCCCEECCCCCCHHHHHHHHHCCCEEEE AGDAAQEGPPLTPVSSHDAKMVAANLLEGNRHRPDYRGVPSVAFTIPPIAAVGLSEEQAR ECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHH QQDLKFQTKSQKASDWFTARQAVEKTYGFKVMVEDDTGRIIGAHLVGPHADEVINLFALA HHHCCEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHH IRHDLTADNLKTTMFAYPTGASDIGYML HHHCCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure AEQYDLVVIGTGTAAMVAAMRVRAAGWSVAIIDYRPFGGTCALRGCDPKKMLVGGASAL CCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCCHHEEECCHHHH DHARRMRGNGVAGDVHIDWPELIAFKRTFTDPVPEKHEHRYDEKGIHTYRGHARFTGRNS HHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEECCCEEEECCCE LTVDGESLEARHVLIAAGAEPIRLGIPGEEYFATNEDFLAMERLPRRIVLVGGGYIASEF EEECCCCCCEEEEEEEECCCEEEECCCCHHHCCCCCCHHHHHHCCCEEEEEECCHHHHHH SHIAARAGVQVTILQRGKRMLGHFDPDLVGWLMDKFREIRVDVRLRTTVSAIEKDHAGFV HHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEEEHHHHHHHCCCCCEE VRASSEGGDATFDADLVVHSAGRAPALDALDLEAGGVAAEKGRLKLNEYLQSVSNAAVYA EEECCCCCCCEEEEEEEEECCCCCCCCCEEECCCCCEECCCCCCHHHHHHHHHCCCEEEE AGDAAQEGPPLTPVSSHDAKMVAANLLEGNRHRPDYRGVPSVAFTIPPIAAVGLSEEQAR ECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHH QQDLKFQTKSQKASDWFTARQAVEKTYGFKVMVEDDTGRIIGAHLVGPHADEVINLFALA HHHCCEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHH IRHDLTADNLKTTMFAYPTGASDIGYML HHHCCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849605; 10984043 [H]