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The map label for this gene is yokA [H]

Identifier: 154246790

GI number: 154246790

Start: 3180242

End: 3181939

Strand: Reverse

Name: yokA [H]

Synonym: Xaut_2851

Alternate gene names: 154246790

Gene position: 3181939-3180242 (Counterclockwise)

Preceding gene: 154246791

Following gene: 154246783

Centisome position: 59.94

GC content: 62.37

Gene sequence:

>1698_bases
ATGACCGACGCAGCACCCGCATCGCCTGACGTGACGGCTGGGCCTGCGATTGCCAAGGCGGCGCTCTATTTGCGCGTCTC
GACGGGACGCCAGGCGGAGAGCGATCTCTCGATCCCAGATCAGCGCCGGCAGAATACGGCCTATTGCGTCGCCAAGGGCT
GGGACGTCGCGGCTGAATTCGTTGAACCAGGCAATACCGCTACTGATGATCGCCGGCCAGCGTTTCAGACGATGATCGAC
GCTGCGCTCGTGAAGCCGCCAACCTTCACCGTCATCGTCGTGCATTCCTTCTCGCGCTTCTTCCGCGATCAGTTCCAGTT
CGAATTCTATGTTCGCAAGCTGGCCAAGAATGGCGTGCGGTTGATCTCCATCACTCAGGATCTCGGCGACGACCCGATGA
GCGTGATGATGCGTCAGATCATGACGCTGTTCGACGAATACCAGTCGAAGGAGAACGCCAAGCACACCCTGCGCGCCATG
AAGGAGAATGCGCGTCAGGGCTACTGGAATGGCGCGCTGCCGCCGATCGGTTACCGCATCGTGGCCGCCGAACAACGCGG
AGCGAAGATCAAAAAGAAGCTGGAGATCGATCCGATCCACGCCGACACGGTGCGCCTGATCTACAGGCTGGCGCTCAATG
GTGGCGGCGACCGCGGTCCGATGGGTATCAAGTCGATCACCACCTATCTCAATGAGCGCGACGTTCGCACCCGCGACGGC
GGCCGCTGGGGCATCGCCTCGGTGCATCAGATACTCACGCGCACCACATATATCGGGCAGCATCGGTTCAACACGCGCGA
CCACAAGACGCGCACGGCAAAACCCGAGGCCGAGCACGCGGTCATGGATGTTCCGCCGATCATCACCGAAGCGGAGTTCG
AGGCCGTCCAGGCGGCGTTGAAGGCGCGCAGCCCGCAATGGATGCCGCCGCGCGCTGTGAGCGGTCCGACTTTACTGACC
GGGATTTGCTTCTGCGCATTCTGTGGCGGTGCGATGACGCTACGGACCGGCAAGGGCAGCGCAGGCGGCATGTATCGCTA
CTACACCTGCTCGACGAAGGCGCGGCAGGGCGAGCGTGGTTGTCGCGGTCTGACGGTGCCGATGGACAAGCTCGACCGCG
CTGTGGTCAATCACCTGGAGTGGCGGCTGCTCGATCCGGCGCGTTTGACGACGATGATGGATCAGTTGCTTGAGCGACGT
GAAGAATGGAATGAACGCCGTCGCGGACACATCGCGGAGCTGCGAAAGCGCGCCGCCGAAGCCGAGGCGAAGTTGAAACG
TCTCTATGAAGCGATCGAGAACGGCGTGGTCGATATGGCCGACCCGTCGCTGAAAGATCGCATCGCAGAACTCACCGCGG
TGCGCGATCAGGCGCAGGCTGACGCGGAGCGCGCAACGTCCGCGGTGGAGCGACTCGGGCCCGCGATCACGCCGGACAGT
TTGCGGCGGTTCGCGCTCGCAGCTCGACGCAAGCTGCGGAACGAAGATGGAACTTATCGGCGGGACCATTTACGCGCGCT
TGCCCAGCGGGTCGAGGTCGTCGACCCGAGCGAGATTCGCATCATGGGCTCGAAAACTGAACTGCTACGGACACTTGTCG
CTGCTGCTAGCGTAGAATCGGCGGCTGTTGGCGTTCGCAGTTTTATACCGAAGTGGCGCGCCGGGGAAGATTCGAACTCC
CGACCCCCAGATTCGTAG

Upstream 100 bases:

>100_bases
AGCGCGCCGCCGCCTTCTATGAGGGAAACGGCTTCGTGCGGCTGCCGGACTCCCTCCGGCTGGTCCTACCGATGCACGCA
ATCCAGCGATTGGTGGAGCC

Downstream 100 bases:

>100_bases
TCTGGTGCTCTATCCAGCTGAGCTACCGGCGCCTGTGCCCGAAACCGGTGGGAACCGGCCTGGAAGGGAAGCCCTTCCGG
GGCGTCGCGGCGTTGGAGCG

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MTDAAPASPDVTAGPAIAKAALYLRVSTGRQAESDLSIPDQRRQNTAYCVAKGWDVAAEFVEPGNTATDDRRPAFQTMID
AALVKPPTFTVIVVHSFSRFFRDQFQFEFYVRKLAKNGVRLISITQDLGDDPMSVMMRQIMTLFDEYQSKENAKHTLRAM
KENARQGYWNGALPPIGYRIVAAEQRGAKIKKKLEIDPIHADTVRLIYRLALNGGGDRGPMGIKSITTYLNERDVRTRDG
GRWGIASVHQILTRTTYIGQHRFNTRDHKTRTAKPEAEHAVMDVPPIITEAEFEAVQAALKARSPQWMPPRAVSGPTLLT
GICFCAFCGGAMTLRTGKGSAGGMYRYYTCSTKARQGERGCRGLTVPMDKLDRAVVNHLEWRLLDPARLTTMMDQLLERR
EEWNERRRGHIAELRKRAAEAEAKLKRLYEAIENGVVDMADPSLKDRIAELTAVRDQAQADAERATSAVERLGPAITPDS
LRRFALAARRKLRNEDGTYRRDHLRALAQRVEVVDPSEIRIMGSKTELLRTLVAAASVESAAVGVRSFIPKWRAGEDSNS
RPPDS

Sequences:

>Translated_565_residues
MTDAAPASPDVTAGPAIAKAALYLRVSTGRQAESDLSIPDQRRQNTAYCVAKGWDVAAEFVEPGNTATDDRRPAFQTMID
AALVKPPTFTVIVVHSFSRFFRDQFQFEFYVRKLAKNGVRLISITQDLGDDPMSVMMRQIMTLFDEYQSKENAKHTLRAM
KENARQGYWNGALPPIGYRIVAAEQRGAKIKKKLEIDPIHADTVRLIYRLALNGGGDRGPMGIKSITTYLNERDVRTRDG
GRWGIASVHQILTRTTYIGQHRFNTRDHKTRTAKPEAEHAVMDVPPIITEAEFEAVQAALKARSPQWMPPRAVSGPTLLT
GICFCAFCGGAMTLRTGKGSAGGMYRYYTCSTKARQGERGCRGLTVPMDKLDRAVVNHLEWRLLDPARLTTMMDQLLERR
EEWNERRRGHIAELRKRAAEAEAKLKRLYEAIENGVVDMADPSLKDRIAELTAVRDQAQADAERATSAVERLGPAITPDS
LRRFALAARRKLRNEDGTYRRDHLRALAQRVEVVDPSEIRIMGSKTELLRTLVAAASVESAAVGVRSFIPKWRAGEDSNS
RPPDS
>Mature_564_residues
TDAAPASPDVTAGPAIAKAALYLRVSTGRQAESDLSIPDQRRQNTAYCVAKGWDVAAEFVEPGNTATDDRRPAFQTMIDA
ALVKPPTFTVIVVHSFSRFFRDQFQFEFYVRKLAKNGVRLISITQDLGDDPMSVMMRQIMTLFDEYQSKENAKHTLRAMK
ENARQGYWNGALPPIGYRIVAAEQRGAKIKKKLEIDPIHADTVRLIYRLALNGGGDRGPMGIKSITTYLNERDVRTRDGG
RWGIASVHQILTRTTYIGQHRFNTRDHKTRTAKPEAEHAVMDVPPIITEAEFEAVQAALKARSPQWMPPRAVSGPTLLTG
ICFCAFCGGAMTLRTGKGSAGGMYRYYTCSTKARQGERGCRGLTVPMDKLDRAVVNHLEWRLLDPARLTTMMDQLLERRE
EWNERRRGHIAELRKRAAEAEAKLKRLYEAIENGVVDMADPSLKDRIAELTAVRDQAQADAERATSAVERLGPAITPDSL
RRFALAARRKLRNEDGTYRRDHLRALAQRVEVVDPSEIRIMGSKTELLRTLVAAASVESAAVGVRSFIPKWRAGEDSNSR
PPDS

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 63135; Mature: 63004

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAAPASPDVTAGPAIAKAALYLRVSTGRQAESDLSIPDQRRQNTAYCVAKGWDVAAEF
CCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCHHHCCCCEEEEECCCHHHHHH
VEPGNTATDDRRPAFQTMIDAALVKPPTFTVIVVHSFSRFFRDQFQFEFYVRKLAKNGVR
HCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCE
LISITQDLGDDPMSVMMRQIMTLFDEYQSKENAKHTLRAMKENARQGYWNGALPPIGYRI
EEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VAAEQRGAKIKKKLEIDPIHADTVRLIYRLALNGGGDRGPMGIKSITTYLNERDVRTRDG
EEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCC
GRWGIASVHQILTRTTYIGQHRFNTRDHKTRTAKPEAEHAVMDVPPIITEAEFEAVQAAL
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
KARSPQWMPPRAVSGPTLLTGICFCAFCGGAMTLRTGKGSAGGMYRYYTCSTKARQGERG
HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCHHHCCCCC
CRGLTVPMDKLDRAVVNHLEWRLLDPARLTTMMDQLLERREEWNERRRGHIAELRKRAAE
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AEAKLKRLYEAIENGVVDMADPSLKDRIAELTAVRDQAQADAERATSAVERLGPAITPDS
HHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LRRFALAARRKLRNEDGTYRRDHLRALAQRVEVVDPSEIRIMGSKTELLRTLVAAASVES
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHH
AAVGVRSFIPKWRAGEDSNSRPPDS
HHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDAAPASPDVTAGPAIAKAALYLRVSTGRQAESDLSIPDQRRQNTAYCVAKGWDVAAEF
CCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCHHHCCCCEEEEECCCHHHHHH
VEPGNTATDDRRPAFQTMIDAALVKPPTFTVIVVHSFSRFFRDQFQFEFYVRKLAKNGVR
HCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCE
LISITQDLGDDPMSVMMRQIMTLFDEYQSKENAKHTLRAMKENARQGYWNGALPPIGYRI
EEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VAAEQRGAKIKKKLEIDPIHADTVRLIYRLALNGGGDRGPMGIKSITTYLNERDVRTRDG
EEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCC
GRWGIASVHQILTRTTYIGQHRFNTRDHKTRTAKPEAEHAVMDVPPIITEAEFEAVQAAL
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
KARSPQWMPPRAVSGPTLLTGICFCAFCGGAMTLRTGKGSAGGMYRYYTCSTKARQGERG
HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCHHHCCCCC
CRGLTVPMDKLDRAVVNHLEWRLLDPARLTTMMDQLLERREEWNERRRGHIAELRKRAAE
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AEAKLKRLYEAIENGVVDMADPSLKDRIAELTAVRDQAQADAERATSAVERLGPAITPDS
HHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LRRFALAARRKLRNEDGTYRRDHLRALAQRVEVVDPSEIRIMGSKTELLRTLVAAASVES
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHH
AAVGVRSFIPKWRAGEDSNSRPPDS
HHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]