| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is chvI [H]
Identifier: 154246784
GI number: 154246784
Start: 3174488
End: 3175186
Strand: Direct
Name: chvI [H]
Synonym: Xaut_2845
Alternate gene names: 154246784
Gene position: 3174488-3175186 (Clockwise)
Preceding gene: 154246781
Following gene: 154246785
Centisome position: 59.8
GC content: 64.09
Gene sequence:
>699_bases ATGCCCACCATCGCCCTCGTCGACGACGACCGCAACATTCTGACCTCGGTTTCCATCGCGCTGGAGGCGGAAGGCTATCG CATCGACACCTACACCGATGGCGCCTCGGCCCTGGACGGATTCAAGACCAACCCGCCGGACCTCGCCATCCTCGACATCA AGATGCCGCGCATGGACGGCATGGAGCTGCTGCGCCGCCTGCGCCAGAAGACCGACATGCCGGTGATCTTCCTCACCTCC AAGGATGAGGAGATCGACGAATTGTTCGGCCTCAAGATGGGCGCCGACGACTTCATCAAGAAGCCGTTCTCCCAGCGCCT GCTGGTGGAGCGGGTGAAGGCCGTGCTGCGCCGGGTGGGCGCCAAGGACGGTGCCGCTCCGCGCGAGACCGACAGCGCCA AGGTGCTGGAGCGTGGCAACCTGCGCATGGATCCCGAGCGCCACACCTGCACCTGGAAGGGTGAGCCGGTGACCCTCACC GTCACCGAGTTCCTCATCCTGCAGGCGCTGGCCCAGCGTCCCGGCGTGGTCAAGAGCCGCAACGCCCTGATGGACGCGGC CTATGATGATCAGGTCTATGTGGACGACCGCACCATCGACAGCCACATCAAGCGCCTGCGCAAGAAGTTCAAGTCGGTGG ACGACAGCTTCGAGATGATCGAGACCCTGTACGGCGTCGGCTACCGGTTCAAGGAGTGA
Upstream 100 bases:
>100_bases CGACTCTTGTGTGTCACATTTCGGCCACGCGAACGGGGTTCACCCCTCGCGCAAGGCCGCAGTTGAGGCCGCTGTACCCA GACGGCTGAAAAGAGGTGTC
Downstream 100 bases:
>100_bases GCACCACGGCACCGCGCCGGGGGCTCTGGACGACATGACGGCGCACACCGACGAGGCCAGGGCCGACGAGATGGCTCCGG GCGGACCCGGGGCCTCCGGC
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MPTIALVDDDRNILTSVSIALEAEGYRIDTYTDGASALDGFKTNPPDLAILDIKMPRMDGMELLRRLRQKTDMPVIFLTS KDEEIDELFGLKMGADDFIKKPFSQRLLVERVKAVLRRVGAKDGAAPRETDSAKVLERGNLRMDPERHTCTWKGEPVTLT VTEFLILQALAQRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKSVDDSFEMIETLYGVGYRFKE
Sequences:
>Translated_232_residues MPTIALVDDDRNILTSVSIALEAEGYRIDTYTDGASALDGFKTNPPDLAILDIKMPRMDGMELLRRLRQKTDMPVIFLTS KDEEIDELFGLKMGADDFIKKPFSQRLLVERVKAVLRRVGAKDGAAPRETDSAKVLERGNLRMDPERHTCTWKGEPVTLT VTEFLILQALAQRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKSVDDSFEMIETLYGVGYRFKE >Mature_231_residues PTIALVDDDRNILTSVSIALEAEGYRIDTYTDGASALDGFKTNPPDLAILDIKMPRMDGMELLRRLRQKTDMPVIFLTSK DEEIDELFGLKMGADDFIKKPFSQRLLVERVKAVLRRVGAKDGAAPRETDSAKVLERGNLRMDPERHTCTWKGEPVTLTV TEFLILQALAQRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKSVDDSFEMIETLYGVGYRFKE
Specific function: Member of a two-component regulatory system ChvG/ChvI [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788394, Length=230, Percent_Identity=39.1304347826087, Blast_Score=171, Evalue=6e-44, Organism=Escherichia coli, GI1790860, Length=230, Percent_Identity=36.5217391304348, Blast_Score=162, Evalue=2e-41, Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=36.5217391304348, Blast_Score=144, Evalue=4e-36, Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=35.1931330472103, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=38.5964912280702, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1789402, Length=230, Percent_Identity=33.0434782608696, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=34.061135371179, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI87082012, Length=229, Percent_Identity=36.2445414847162, Blast_Score=120, Evalue=9e-29, Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=33.0434782608696, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1790552, Length=226, Percent_Identity=31.4159292035398, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1787375, Length=229, Percent_Identity=29.2576419213974, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1786911, Length=237, Percent_Identity=30.379746835443, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786784, Length=228, Percent_Identity=31.5789473684211, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI145693140, Length=239, Percent_Identity=29.7071129707113, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1790299, Length=101, Percent_Identity=34.6534653465347, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1788550, Length=101, Percent_Identity=35.6435643564356, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26362; Mature: 26230
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIALVDDDRNILTSVSIALEAEGYRIDTYTDGASALDGFKTNPPDLAILDIKMPRMDG CCEEEEEECCCHHHHHEEEEEECCCEEEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCH MELLRRLRQKTDMPVIFLTSKDEEIDELFGLKMGADDFIKKPFSQRLLVERVKAVLRRVG HHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCC AKDGAAPRETDSAKVLERGNLRMDPERHTCTWKGEPVTLTVTEFLILQALAQRPGVVKSR CCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHCCCCCCHH NALMDAAYDDQVYVDDRTIDSHIKRLRKKFKSVDDSFEMIETLYGVGYRFKE HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PTIALVDDDRNILTSVSIALEAEGYRIDTYTDGASALDGFKTNPPDLAILDIKMPRMDG CEEEEEECCCHHHHHEEEEEECCCEEEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCH MELLRRLRQKTDMPVIFLTSKDEEIDELFGLKMGADDFIKKPFSQRLLVERVKAVLRRVG HHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCC AKDGAAPRETDSAKVLERGNLRMDPERHTCTWKGEPVTLTVTEFLILQALAQRPGVVKSR CCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHCCCCCCHH NALMDAAYDDQVYVDDRTIDSHIKRLRKKFKSVDDSFEMIETLYGVGYRFKE HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407839 [H]