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The map label for this gene is fecI [C]

Identifier: 154246720

GI number: 154246720

Start: 3080093

End: 3080875

Strand: Direct

Name: fecI [C]

Synonym: Xaut_2781

Alternate gene names: 154246720

Gene position: 3080093-3080875 (Clockwise)

Preceding gene: 154246719

Following gene: 154246721

Centisome position: 58.02

GC content: 70.5

Gene sequence:

>783_bases
ATGACTGCGCCACTGCGCCATCCCTCTGCTTATTCGGCCTCTGCTTCTGTGGCCCCTGCTTCATTCGCTTCCGCTTCCGC
GGCGCTTTCGGGCGCGACGGCGAGCGCGCCCCTGTTCGACACCCTCCTCGCCCACCGCGCCCGGCTGGTGCGGATGGCGT
TCCGCATCGTCCAGTCCCGGCATCTTGCGGAGGATGTGGTGGAGGACGTGGCGGTCAAGCTCTGCGAGGGCGAGGGGGTG
ATCGCGGCGGACCATCCGGCGCCGTTCCTCTACCGCCTGGTGCGCAACCTTGCCATCGACCGGGCGCGCCGGCTGAAGCG
CGAGCGCAGTCTCGCCGGCAGCGCGGAGGAGGCCGCCCACGTGGCCATGCCCTGCGCCTGCCCGCTGGAGCGCCTGGAGC
AGCGCGAGATGCTGGAGGTGGTGATCCGCGCCCTCGACACCCTGCCGCCGCGCACCCGCCTCGCCTTCCTGCGCCATCGC
ATCGACGGCATGCCGCAGAAGGACATCGCCGAACATCTGGGGGTGTCGCGCACGCTGGTGAATTTCATGGTGCGCGACGC
CACCAAGGTCTGCCGCGACAGCATCGACGCCTATTGTGGGCGCACCACCGCCCGCTGTCCCAAGGCAAGCTGCCCCAAGG
CGCGCGCGGCCAAAACACCTGCCCCTGAAAAGGCTCAACTGGACCAGGCGCAGCCGGAGAAGACGCCGCGTCCCGCCCCG
CGCTGCCCGCTGTCAGAGCGACACCCCAACGTCCGCGGCGCGGCGTCCAAGGCGGTCGCATGA

Upstream 100 bases:

>100_bases
CGGTGAGTTTCGTTCGCTGAGCTTCCCCACGGCTTAAGGGCGGGGGCAGGACGTGCCGGTTTGCGCGGAGAATGCCGCCG
GCCGGCGGAAAGGGGTTCCC

Downstream 100 bases:

>100_bases
CAGACGCATTATTCTCCCGCCGTGCGCTGATGGCGGGTGCGGCGGCGCTCCTCGCCGGCCGGGCGATGGCTGCTCCCGGG
CCACGGGTAGTGGCGTTCGA

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: Extracytoplasmic-Function Sigma-70 Factor; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-; Extracytoplasmic-Function Sigma-70 Factor PvdS; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma-70 Factor; RNA Polymerase Sigma Factor FecI Family; ECF Family Sigma Factor; RNA Polymerase Sigma Factor FecI; RNA Polymerase Sigma-70 Family Protein; Ferric Regulator Sigma-24 Subunit; DNA-Directed RNA Polymerase Sigma-E/Sigma-24/FecI; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; RNA Polymerase Sigma Factor Protein; RNA Polymerase Sigma-70 Factor; ECF Subfamily RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTAPLRHPSAYSASASVAPASFASASAALSGATASAPLFDTLLAHRARLVRMAFRIVQSRHLAEDVVEDVAVKLCEGEGV
IAADHPAPFLYRLVRNLAIDRARRLKRERSLAGSAEEAAHVAMPCACPLERLEQREMLEVVIRALDTLPPRTRLAFLRHR
IDGMPQKDIAEHLGVSRTLVNFMVRDATKVCRDSIDAYCGRTTARCPKASCPKARAAKTPAPEKAQLDQAQPEKTPRPAP
RCPLSERHPNVRGAASKAVA

Sequences:

>Translated_260_residues
MTAPLRHPSAYSASASVAPASFASASAALSGATASAPLFDTLLAHRARLVRMAFRIVQSRHLAEDVVEDVAVKLCEGEGV
IAADHPAPFLYRLVRNLAIDRARRLKRERSLAGSAEEAAHVAMPCACPLERLEQREMLEVVIRALDTLPPRTRLAFLRHR
IDGMPQKDIAEHLGVSRTLVNFMVRDATKVCRDSIDAYCGRTTARCPKASCPKARAAKTPAPEKAQLDQAQPEKTPRPAP
RCPLSERHPNVRGAASKAVA
>Mature_259_residues
TAPLRHPSAYSASASVAPASFASASAALSGATASAPLFDTLLAHRARLVRMAFRIVQSRHLAEDVVEDVAVKLCEGEGVI
AADHPAPFLYRLVRNLAIDRARRLKRERSLAGSAEEAAHVAMPCACPLERLEQREMLEVVIRALDTLPPRTRLAFLRHRI
DGMPQKDIAEHLGVSRTLVNFMVRDATKVCRDSIDAYCGRTTARCPKASCPKARAAKTPAPEKAQLDQAQPEKTPRPAPR
CPLSERHPNVRGAASKAVA

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28218; Mature: 28087

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPLRHPSAYSASASVAPASFASASAALSGATASAPLFDTLLAHRARLVRMAFRIVQSR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HLAEDVVEDVAVKLCEGEGVIAADHPAPFLYRLVRNLAIDRARRLKRERSLAGSAEEAAH
HHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VAMPCACPLERLEQREMLEVVIRALDTLPPRTRLAFLRHRIDGMPQKDIAEHLGVSRTLV
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHH
NFMVRDATKVCRDSIDAYCGRTTARCPKASCPKARAAKTPAPEKAQLDQAQPEKTPRPAP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCC
RCPLSERHPNVRGAASKAVA
CCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
TAPLRHPSAYSASASVAPASFASASAALSGATASAPLFDTLLAHRARLVRMAFRIVQSR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HLAEDVVEDVAVKLCEGEGVIAADHPAPFLYRLVRNLAIDRARRLKRERSLAGSAEEAAH
HHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VAMPCACPLERLEQREMLEVVIRALDTLPPRTRLAFLRHRIDGMPQKDIAEHLGVSRTLV
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHH
NFMVRDATKVCRDSIDAYCGRTTARCPKASCPKARAAKTPAPEKAQLDQAQPEKTPRPAP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCC
RCPLSERHPNVRGAASKAVA
CCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA