Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is fct [H]

Identifier: 154246718

GI number: 154246718

Start: 3076603

End: 3079194

Strand: Direct

Name: fct [H]

Synonym: Xaut_2779

Alternate gene names: 154246718

Gene position: 3076603-3079194 (Clockwise)

Preceding gene: 154246717

Following gene: 154246719

Centisome position: 57.95

GC content: 64.35

Gene sequence:

>2592_bases
ATGCTGGACTATCACTGTCGTCGGCCGTCGCGCGTGAGCGGCAAGGCCATCCGTCTCGGCCTGGGCCTCGCCCTTTTGGC
CAGCACGGCCCTTTCGTCGGCCTTCACCGGTTCGGCGGCCATGGCGCAGCAGACGGCGGCGATCGCCTTCGCCATCCCGC
CGTCCTCCCTCACTTCGGCCCTCACGGCATTCGGTGATCGCGCCAATCTTCAGGTGCTCTACGCGGCGGATCTGGCACGC
GGCGTCCAGTCGCCCGGCGTGTCCGGCACCCTGGCGCCGGCGCAGGCACTGTCCCGCCTGCTGGCGGGCACCGGCCTCAC
CTATCGGTTCACCAGCGCCAACACGGTCACCATCGCCCGGCCGGCGGAGAGCGGCGGCGCGGCGCTGCCGGAAGGCGGCA
TCCAGCTCGATACCGTGACGGTGGAGGCGGACGGCGTCGCCGGCCCCTTCGTGGCCGTCGACACCTCCACCGGCATGAAG
ATGGATGTGCCGCTGCGCGAGGTTCCCCAATCGGTCTCGGTGGTGACACGCCAGCAGATGGATGATCGCGGGGTGCAGAC
CCTGAGCGATGCCATCGACTATTCGGCGGGTGTCTCGGCCTCGCCCTACGGGCAGGACAATCGCTTCGAGCAGTTCGTCA
TCCGCGGCTTCGACGAGAACCTGCTGGGCGTCTATCGCGACGGCATGCGCATGCCCACGGCCGGCTTCGCCGGCTTCCGC
CAGGAGCCCTATGGCCTGGCCCGCGTGGACATCCTGCGCGGCCCGACCTCCACGCTCTATGGCCTCAACAATCCAGGCGG
CCTGGTCAATCTGGTCTCCAAGCTGCCGGTGGTCGGCGCGCAGTTCGGCGAGATCTGGGCCTCCTACGGCTCGTTCGACA
ACCTCCAGACCGGCTTCGACATCAATGGCGCCGGCGTGGACGGTTCGAACATCACCTATCGCTTCACCGGGCTGGTGCGC
GGGGCCGACACCCAGGTTGACTATGTGTCCAACGACCGCATCTACGTGGCGCCGACCCTGACGTGGACGCCCAATGCGAA
CACCACCTTCACCGTGTTCGCCAACCTGCAGCAGGACCGCACCGGCGATACCTACCAGCTGCTGCCGGCGGAAGGCACGC
TCTACCCCAGTGTCTACGGCAAGATCCCGCCCTCGCGCTTCCTCGGCGTGCCGGACTGGTCGAAGTATGATGCCACCCAG
TATTCGGGCGGTTATTTCTTCGAGCACCGTGCCGACAACGGCTGGACGCTGCGACAGAACCTGCGCTACGCGTCGGTGGA
CGTGGACTATCGCACCGCCTATCCCATCGCCGCCTATGGCGACACAACGACCCTGCTGCGCACCGCCCAGGAAAATAACC
AGACGCTGGGCGTCTTCACCATCGACAACCAGGCCCAGTACGACAGCGATCTGGGGTTCGCCAAGAACCAGGTGGTATTC
GGCCTCGACTATTCCAACACCCAGCAGGACGGCACCCAATATGGCGGCACGCTGCAGAGCCTCATCACGGGCTCCTCGCC
GGTGGGGCCGATCAATCCCTATTTCCCCGTCTACGACAGCACCGTCGCGCCGCTGATCAATACCCTGAATACGTCCCAAA
GTCTGAGCCAGACAGGCCTCTATGCCCAGGACATGTTCAAGCTCCACGACAAATGGGTGTTCACCTTCGGTGGTCGCTAC
GACTGGGTTCAGACCGAAAGCTCGACGCAGAGCCCGGTGCTGGCGCAGCTCGCGCCGCTGCTGAATTATTATTACGGCGT
CAACGTTCCGAGCACGTTCCAGACCAGCGCCAACAACGGCGCCTTCAGCGGCCGGGTCGGCCTGTCCTACCTGTTCGACA
ATGGCATGACGCCCTATGCCAGCTATTCCAGCTCGTTCAACGTGGTGCCTGGCTTCACCCAGTCCAGCGTGACGGTGGAT
ACGGACTATGGCCCGCTGCCCATCAGCTACAGCATGCAGCCGCTGAAGCCGGAAACCGGCGAGCAGTATGAAGTGGGCCT
GAAATACCAGCCCAACAACGGCAAGAGCTATATCCAGACCTCGCTCTACCAGCTCACCAAGCAGAATGCGGTAAGCTTCG
ACACCACCGACCCCATGCAGCAGGCCTATTACCAGACCGGCGAGGTCCAGGTACGGGGCTTCGAGGTGGAAGGCGCGGTG
GATTTCGAGAACGGCTTCAAGCTCCTCGCCGCCTACACCTATCTGCATGCCGAGGTGACGGCGGACATTCCCCCGGTCGG
TGAGCCGAGCATCGTGGGCAATACGCCGGAACGCGTGCCGGCGCATCTCGCCTCGGCGTGGCTCGACTACACCTTCCAGG
ACGGTGCCTTGAAGGGCTTCGGCCTTGGCGGCGGCGTGCGCTACGTGGGCTCCACCTGGGGCGACCGCGAGAACACCATT
TATGTGCCCAGCTACACGCTGGTGGACGCGGCAGTGCGCTACGCCAAGGACAGCTGGCTGTTCTCGCTCACCGCCAAGAA
CCTGTTCGACAATGCTTATGTGGGCACCTGCTCCAGCATCGCGAATACCTATATCGGCTGCTCCTATGGGCAGACCCGTA
CCATCACCGCGCAGGTGACTTACAAATGGTAG

Upstream 100 bases:

>100_bases
AGGTCCCGGCCACCCCCGTCCGTCTCTGAGATATCGCGGCGATCGGTCTGGATTTTCCGGGTCGGCGCTGCCGCTCAGCT
CATCGGGCTTTCGGGGTGCC

Downstream 100 bases:

>100_bases
GTGACCTGCAAACAGCAGGGGAACTGCGCGCGGAAGCGGGGGAGCCGAAGGGCTTCGCGCTGGAGGGGGTCGGCTTTGCC
GCCGAAGGCCGTCCGCTGCT

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 863; Mature: 863

Protein sequence:

>863_residues
MLDYHCRRPSRVSGKAIRLGLGLALLASTALSSAFTGSAAMAQQTAAIAFAIPPSSLTSALTAFGDRANLQVLYAADLAR
GVQSPGVSGTLAPAQALSRLLAGTGLTYRFTSANTVTIARPAESGGAALPEGGIQLDTVTVEADGVAGPFVAVDTSTGMK
MDVPLREVPQSVSVVTRQQMDDRGVQTLSDAIDYSAGVSASPYGQDNRFEQFVIRGFDENLLGVYRDGMRMPTAGFAGFR
QEPYGLARVDILRGPTSTLYGLNNPGGLVNLVSKLPVVGAQFGEIWASYGSFDNLQTGFDINGAGVDGSNITYRFTGLVR
GADTQVDYVSNDRIYVAPTLTWTPNANTTFTVFANLQQDRTGDTYQLLPAEGTLYPSVYGKIPPSRFLGVPDWSKYDATQ
YSGGYFFEHRADNGWTLRQNLRYASVDVDYRTAYPIAAYGDTTTLLRTAQENNQTLGVFTIDNQAQYDSDLGFAKNQVVF
GLDYSNTQQDGTQYGGTLQSLITGSSPVGPINPYFPVYDSTVAPLINTLNTSQSLSQTGLYAQDMFKLHDKWVFTFGGRY
DWVQTESSTQSPVLAQLAPLLNYYYGVNVPSTFQTSANNGAFSGRVGLSYLFDNGMTPYASYSSSFNVVPGFTQSSVTVD
TDYGPLPISYSMQPLKPETGEQYEVGLKYQPNNGKSYIQTSLYQLTKQNAVSFDTTDPMQQAYYQTGEVQVRGFEVEGAV
DFENGFKLLAAYTYLHAEVTADIPPVGEPSIVGNTPERVPAHLASAWLDYTFQDGALKGFGLGGGVRYVGSTWGDRENTI
YVPSYTLVDAAVRYAKDSWLFSLTAKNLFDNAYVGTCSSIANTYIGCSYGQTRTITAQVTYKW

Sequences:

>Translated_863_residues
MLDYHCRRPSRVSGKAIRLGLGLALLASTALSSAFTGSAAMAQQTAAIAFAIPPSSLTSALTAFGDRANLQVLYAADLAR
GVQSPGVSGTLAPAQALSRLLAGTGLTYRFTSANTVTIARPAESGGAALPEGGIQLDTVTVEADGVAGPFVAVDTSTGMK
MDVPLREVPQSVSVVTRQQMDDRGVQTLSDAIDYSAGVSASPYGQDNRFEQFVIRGFDENLLGVYRDGMRMPTAGFAGFR
QEPYGLARVDILRGPTSTLYGLNNPGGLVNLVSKLPVVGAQFGEIWASYGSFDNLQTGFDINGAGVDGSNITYRFTGLVR
GADTQVDYVSNDRIYVAPTLTWTPNANTTFTVFANLQQDRTGDTYQLLPAEGTLYPSVYGKIPPSRFLGVPDWSKYDATQ
YSGGYFFEHRADNGWTLRQNLRYASVDVDYRTAYPIAAYGDTTTLLRTAQENNQTLGVFTIDNQAQYDSDLGFAKNQVVF
GLDYSNTQQDGTQYGGTLQSLITGSSPVGPINPYFPVYDSTVAPLINTLNTSQSLSQTGLYAQDMFKLHDKWVFTFGGRY
DWVQTESSTQSPVLAQLAPLLNYYYGVNVPSTFQTSANNGAFSGRVGLSYLFDNGMTPYASYSSSFNVVPGFTQSSVTVD
TDYGPLPISYSMQPLKPETGEQYEVGLKYQPNNGKSYIQTSLYQLTKQNAVSFDTTDPMQQAYYQTGEVQVRGFEVEGAV
DFENGFKLLAAYTYLHAEVTADIPPVGEPSIVGNTPERVPAHLASAWLDYTFQDGALKGFGLGGGVRYVGSTWGDRENTI
YVPSYTLVDAAVRYAKDSWLFSLTAKNLFDNAYVGTCSSIANTYIGCSYGQTRTITAQVTYKW
>Mature_863_residues
MLDYHCRRPSRVSGKAIRLGLGLALLASTALSSAFTGSAAMAQQTAAIAFAIPPSSLTSALTAFGDRANLQVLYAADLAR
GVQSPGVSGTLAPAQALSRLLAGTGLTYRFTSANTVTIARPAESGGAALPEGGIQLDTVTVEADGVAGPFVAVDTSTGMK
MDVPLREVPQSVSVVTRQQMDDRGVQTLSDAIDYSAGVSASPYGQDNRFEQFVIRGFDENLLGVYRDGMRMPTAGFAGFR
QEPYGLARVDILRGPTSTLYGLNNPGGLVNLVSKLPVVGAQFGEIWASYGSFDNLQTGFDINGAGVDGSNITYRFTGLVR
GADTQVDYVSNDRIYVAPTLTWTPNANTTFTVFANLQQDRTGDTYQLLPAEGTLYPSVYGKIPPSRFLGVPDWSKYDATQ
YSGGYFFEHRADNGWTLRQNLRYASVDVDYRTAYPIAAYGDTTTLLRTAQENNQTLGVFTIDNQAQYDSDLGFAKNQVVF
GLDYSNTQQDGTQYGGTLQSLITGSSPVGPINPYFPVYDSTVAPLINTLNTSQSLSQTGLYAQDMFKLHDKWVFTFGGRY
DWVQTESSTQSPVLAQLAPLLNYYYGVNVPSTFQTSANNGAFSGRVGLSYLFDNGMTPYASYSSSFNVVPGFTQSSVTVD
TDYGPLPISYSMQPLKPETGEQYEVGLKYQPNNGKSYIQTSLYQLTKQNAVSFDTTDPMQQAYYQTGEVQVRGFEVEGAV
DFENGFKLLAAYTYLHAEVTADIPPVGEPSIVGNTPERVPAHLASAWLDYTFQDGALKGFGLGGGVRYVGSTWGDRENTI
YVPSYTLVDAAVRYAKDSWLFSLTAKNLFDNAYVGTCSSIANTYIGCSYGQTRTITAQVTYKW

Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=768, Percent_Identity=33.3333333333333, Blast_Score=337, Evalue=2e-93,
Organism=Escherichia coli, GI1787024, Length=746, Percent_Identity=24.1286863270777, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI1787344, Length=744, Percent_Identity=22.7150537634409, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1788478, Length=163, Percent_Identity=30.0613496932515, Blast_Score=70, Evalue=8e-13,
Organism=Escherichia coli, GI1787723, Length=187, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 93380; Mature: 93380

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDYHCRRPSRVSGKAIRLGLGLALLASTALSSAFTGSAAMAQQTAAIAFAIPPSSLTSA
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEEECCHHHHHH
LTAFGDRANLQVLYAADLARGVQSPGVSGTLAPAQALSRLLAGTGLTYRFTSANTVTIAR
HHHCCCCCCEEEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEC
PAESGGAALPEGGIQLDTVTVEADGVAGPFVAVDTSTGMKMDVPLREVPQSVSVVTRQQM
CCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCEECCCHHHCCHHHHHHHHHHH
DDRGVQTLSDAIDYSAGVSASPYGQDNRFEQFVIRGFDENLLGVYRDGMRMPTAGFAGFR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCC
QEPYGLARVDILRGPTSTLYGLNNPGGLVNLVSKLPVVGAQFGEIWASYGSFDNLQTGFD
CCCCCEEEEEEECCCCHHEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
INGAGVDGSNITYRFTGLVRGADTQVDYVSNDRIYVAPTLTWTPNANTTFTVFANLQQDR
CCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEEEEEEEEECCCCCEEEEEEEECCCCC
TGDTYQLLPAEGTLYPSVYGKIPPSRFLGVPDWSKYDATQYSGGYFFEHRADNGWTLRQN
CCCEEEEECCCCCCCCHHHCCCCHHHEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECC
LRYASVDVDYRTAYPIAAYGDTTTLLRTAQENNQTLGVFTIDNQAQYDSDLGFAKNQVVF
CEEEEEEECCCCCCCEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEE
GLDYSNTQQDGTQYGGTLQSLITGSSPVGPINPYFPVYDSTVAPLINTLNTSQSLSQTGL
EECCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCC
YAQDMFKLHDKWVFTFGGRYDWVQTESSTQSPVLAQLAPLLNYYYGVNVPSTFQTSANNG
HHHHHHHHCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCC
AFSGRVGLSYLFDNGMTPYASYSSSFNVVPGFTQSSVTVDTDYGPLPISYSMQPLKPETG
CEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
EQYEVGLKYQPNNGKSYIQTSLYQLTKQNAVSFDTTDPMQQAYYQTGEVQVRGFEVEGAV
CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEECCEE
DFENGFKLLAAYTYLHAEVTADIPPVGEPSIVGNTPERVPAHLASAWLDYTFQDGALKGF
ECCCCCEEEHHHEEHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCEEECCCCEEEE
GLGGGVRYVGSTWGDRENTIYVPSYTLVDAAVRYAKDSWLFSLTAKNLFDNAYVGTCSSI
CCCCCEEEECCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCHHHH
ANTYIGCSYGQTRTITAQVTYKW
HHHHEECCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MLDYHCRRPSRVSGKAIRLGLGLALLASTALSSAFTGSAAMAQQTAAIAFAIPPSSLTSA
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEEECCHHHHHH
LTAFGDRANLQVLYAADLARGVQSPGVSGTLAPAQALSRLLAGTGLTYRFTSANTVTIAR
HHHCCCCCCEEEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEC
PAESGGAALPEGGIQLDTVTVEADGVAGPFVAVDTSTGMKMDVPLREVPQSVSVVTRQQM
CCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCEECCCHHHCCHHHHHHHHHHH
DDRGVQTLSDAIDYSAGVSASPYGQDNRFEQFVIRGFDENLLGVYRDGMRMPTAGFAGFR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCC
QEPYGLARVDILRGPTSTLYGLNNPGGLVNLVSKLPVVGAQFGEIWASYGSFDNLQTGFD
CCCCCEEEEEEECCCCHHEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
INGAGVDGSNITYRFTGLVRGADTQVDYVSNDRIYVAPTLTWTPNANTTFTVFANLQQDR
CCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEEEEEEEEECCCCCEEEEEEEECCCCC
TGDTYQLLPAEGTLYPSVYGKIPPSRFLGVPDWSKYDATQYSGGYFFEHRADNGWTLRQN
CCCEEEEECCCCCCCCHHHCCCCHHHEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECC
LRYASVDVDYRTAYPIAAYGDTTTLLRTAQENNQTLGVFTIDNQAQYDSDLGFAKNQVVF
CEEEEEEECCCCCCCEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEE
GLDYSNTQQDGTQYGGTLQSLITGSSPVGPINPYFPVYDSTVAPLINTLNTSQSLSQTGL
EECCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCC
YAQDMFKLHDKWVFTFGGRYDWVQTESSTQSPVLAQLAPLLNYYYGVNVPSTFQTSANNG
HHHHHHHHCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCC
AFSGRVGLSYLFDNGMTPYASYSSSFNVVPGFTQSSVTVDTDYGPLPISYSMQPLKPETG
CEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
EQYEVGLKYQPNNGKSYIQTSLYQLTKQNAVSFDTTDPMQQAYYQTGEVQVRGFEVEGAV
CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEECCEE
DFENGFKLLAAYTYLHAEVTADIPPVGEPSIVGNTPERVPAHLASAWLDYTFQDGALKGF
ECCCCCEEEHHHEEHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCEEECCCCEEEE
GLGGGVRYVGSTWGDRENTIYVPSYTLVDAAVRYAKDSWLFSLTAKNLFDNAYVGTCSSI
CCCCCEEEECCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCHHHH
ANTYIGCSYGQTRTITAQVTYKW
HHHHEECCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8576065 [H]