| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154246534
Identifier: 154246534
GI number: 154246534
Start: 2882456
End: 2883754
Strand: Direct
Name: 154246534
Synonym: Xaut_2593
Alternate gene names: NA
Gene position: 2882456-2883754 (Clockwise)
Preceding gene: 154246533
Following gene: 154246536
Centisome position: 54.29
GC content: 70.82
Gene sequence:
>1299_bases ATGGAGTTTCGCCGAGACCGAGGGACACGCATCAGGCGGTTCGCTTCGCCTGTCCTGCTTGCCGCCGCTTTCGCCGCCGT GCCGCCCGCAATCGCCGGGGCGGATGGCGCCGATTACCGTTCATCCGCCAATGGGCTCGTCATGCTGGCCGCGCCGGCGC GGGCGCTCAAGGTCAGCACGCTGGACCTGCCCCAGCCCATCGGCACCGGCCTGCCCGAGCCGCGGGCGGCATTCAACGAC GCCCCGCGGGTGATCCGGCCCGGGGCGCCCATCGTCACCGCCTCGCTTACCGATGTGTCGGTTCCGCCTGAGGCCTTCAG GGCCGCCGCCATCGCCGGCGCGCCGGTGGCAGATGACCTGACCCCGTCGCCCGCCGTTGCAATGGCCTCGGCATCGGACG ACGACGCCTTCGCCTATCCCCCGCCGCTGGTTCTCGACGCCGAGGATGTGCCCGTCCGCACCGGGCCGAGCCAGCCCCAC CTCGAACTCGCCCTCGATCTGCTGCTGGAACTGCCGCTGATCCAGGACAATTCCGGCCCCATCGCCGAGGATGCCGCCTT CGGCCCCGATTTCGGGGCCGCGCCCGAGGCCGCATCCGCCGGGGAGGAGCCGCCCGCCGCGCCCATCGACCAGGCCGAGG CGCAGCCGGCGCTCCATCACGATCCGGTGGCGGTGTTCAGCCGCGATCCCAACGTTTTCCCGGCATTGGCGTTCGAATAT CACGCCCTGGCCGAGCAGGGCTTCGTGCCGCTGCCCGCGCCGCGCCCCACCGGCGCGGCTGAGATCGCCACCAGCGCTGG CGCCGAGGCGGTGGAAGCGGCCGAGGATGGCGAGCGCGACGGCATCTGGCCCTCGCCTGCGCAGCGCCTCAGCCTGGCCG GCGAGCAACTGGCGCGGGCCCAGAAGTGCCTGGCGGAAGCCATCTATTTCGAAAGCCGGGGCGAGCCGAAGCGGGGGCAG GTGGCGGTGGCGCAGGTCATCGTCAACCGGGTGTTCTCCGGCTACTACCCCAATGATGTGTGCGGCACCGTCTACCAGAA CGCCCACCGGCACCTGGCCTGCCAGTTCACCTTCGCCTGCGACGATGTGCGCGACGTGGTGCGCGAGCCGGACATGTGGG TGCAGGCCAAGGACATCGCCGCCGATATGCTGGACGGCAAATTGTGGCTCACCAGCGTGGGCCGGGCCACCCACTACCAT GCCTATTGGGTGCACCCGAGCTGGGTGAAGGAGATGCGCAAGCTCGACCGCATCGGCGTACACACCTTCTATCGCCCCCG CCGCTGGGGCGAGGGCTGA
Upstream 100 bases:
>100_bases CCACCGGGCAAGGCTGATCGGACAATGCTCTTGCGTGTCACCGTCGGGCAACGCTCCGGCGCCCCATTAGGGACACGATG ACACGTCAAGGGCAGGAGCC
Downstream 100 bases:
>100_bases CACCTTTGGCTTAAGCCCTCCCGGCGCCGGTCGCAGACCGGCGCTGTTGGCATAACCTCCAAGCCCGCGCGGCGCTGAGC GTCGCCCTCTCGGCGCCGGT
Product: cell wall hydrolase SleB
Products: NA
Alternate protein names: Cell Wall Hydrolase Family; SleB-Like Protein; Hydrolase; Cell Wall Hydrolase; Spore Cortex-Lytic; Cell Wall Hydrolase Domain Protein; Spore-Cortex-Lytic Prepeptide; Cell Wall Hydrolase Sleb; N-Acetylmuramoyl-L-Alanine Amidase; Cell Wall Hydrolase Domain-Containing Protein; Cell Wall Hydrolase Family Protein
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MEFRRDRGTRIRRFASPVLLAAAFAAVPPAIAGADGADYRSSANGLVMLAAPARALKVSTLDLPQPIGTGLPEPRAAFND APRVIRPGAPIVTASLTDVSVPPEAFRAAAIAGAPVADDLTPSPAVAMASASDDDAFAYPPPLVLDAEDVPVRTGPSQPH LELALDLLLELPLIQDNSGPIAEDAAFGPDFGAAPEAASAGEEPPAAPIDQAEAQPALHHDPVAVFSRDPNVFPALAFEY HALAEQGFVPLPAPRPTGAAEIATSAGAEAVEAAEDGERDGIWPSPAQRLSLAGEQLARAQKCLAEAIYFESRGEPKRGQ VAVAQVIVNRVFSGYYPNDVCGTVYQNAHRHLACQFTFACDDVRDVVREPDMWVQAKDIAADMLDGKLWLTSVGRATHYH AYWVHPSWVKEMRKLDRIGVHTFYRPRRWGEG
Sequences:
>Translated_432_residues MEFRRDRGTRIRRFASPVLLAAAFAAVPPAIAGADGADYRSSANGLVMLAAPARALKVSTLDLPQPIGTGLPEPRAAFND APRVIRPGAPIVTASLTDVSVPPEAFRAAAIAGAPVADDLTPSPAVAMASASDDDAFAYPPPLVLDAEDVPVRTGPSQPH LELALDLLLELPLIQDNSGPIAEDAAFGPDFGAAPEAASAGEEPPAAPIDQAEAQPALHHDPVAVFSRDPNVFPALAFEY HALAEQGFVPLPAPRPTGAAEIATSAGAEAVEAAEDGERDGIWPSPAQRLSLAGEQLARAQKCLAEAIYFESRGEPKRGQ VAVAQVIVNRVFSGYYPNDVCGTVYQNAHRHLACQFTFACDDVRDVVREPDMWVQAKDIAADMLDGKLWLTSVGRATHYH AYWVHPSWVKEMRKLDRIGVHTFYRPRRWGEG >Mature_432_residues MEFRRDRGTRIRRFASPVLLAAAFAAVPPAIAGADGADYRSSANGLVMLAAPARALKVSTLDLPQPIGTGLPEPRAAFND APRVIRPGAPIVTASLTDVSVPPEAFRAAAIAGAPVADDLTPSPAVAMASASDDDAFAYPPPLVLDAEDVPVRTGPSQPH LELALDLLLELPLIQDNSGPIAEDAAFGPDFGAAPEAASAGEEPPAAPIDQAEAQPALHHDPVAVFSRDPNVFPALAFEY HALAEQGFVPLPAPRPTGAAEIATSAGAEAVEAAEDGERDGIWPSPAQRLSLAGEQLARAQKCLAEAIYFESRGEPKRGQ VAVAQVIVNRVFSGYYPNDVCGTVYQNAHRHLACQFTFACDDVRDVVREPDMWVQAKDIAADMLDGKLWLTSVGRATHYH AYWVHPSWVKEMRKLDRIGVHTFYRPRRWGEG
Specific function: Unknown
COG id: COG3773
COG function: function code M; Cell wall hydrolyses involved in spore germination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46086; Mature: 46086
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFRRDRGTRIRRFASPVLLAAAFAAVPPAIAGADGADYRSSANGLVMLAAPARALKVST CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEE LDLPQPIGTGLPEPRAAFNDAPRVIRPGAPIVTASLTDVSVPPEAFRAAAIAGAPVADDL CCCCCHHCCCCCCCHHHHCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCC TPSPAVAMASASDDDAFAYPPPLVLDAEDVPVRTGPSQPHLELALDLLLELPLIQDNSGP CCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCC IAEDAAFGPDFGAAPEAASAGEEPPAAPIDQAEAQPALHHDPVAVFSRDPNVFPALAFEY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCHHHHHHH HALAEQGFVPLPAPRPTGAAEIATSAGAEAVEAAEDGERDGIWPSPAQRLSLAGEQLARA HHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH QKCLAEAIYFESRGEPKRGQVAVAQVIVNRVFSGYYPNDVCGTVYQNAHRHLACQFTFAC HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEECH DDVRDVVREPDMWVQAKDIAADMLDGKLWLTSVGRATHYHAYWVHPSWVKEMRKLDRIGV HHHHHHHCCCCCEEEHHHHHHHHHCCEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHCH HTFYRPRRWGEG HHHCCCCCCCCC >Mature Secondary Structure MEFRRDRGTRIRRFASPVLLAAAFAAVPPAIAGADGADYRSSANGLVMLAAPARALKVST CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEE LDLPQPIGTGLPEPRAAFNDAPRVIRPGAPIVTASLTDVSVPPEAFRAAAIAGAPVADDL CCCCCHHCCCCCCCHHHHCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCC TPSPAVAMASASDDDAFAYPPPLVLDAEDVPVRTGPSQPHLELALDLLLELPLIQDNSGP CCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCC IAEDAAFGPDFGAAPEAASAGEEPPAAPIDQAEAQPALHHDPVAVFSRDPNVFPALAFEY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCHHHHHHH HALAEQGFVPLPAPRPTGAAEIATSAGAEAVEAAEDGERDGIWPSPAQRLSLAGEQLARA HHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH QKCLAEAIYFESRGEPKRGQVAVAQVIVNRVFSGYYPNDVCGTVYQNAHRHLACQFTFAC HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEECH DDVRDVVREPDMWVQAKDIAADMLDGKLWLTSVGRATHYHAYWVHPSWVKEMRKLDRIGV HHHHHHHCCCCCEEEHHHHHHHHHCCEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHCH HTFYRPRRWGEG HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA