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The map label for this gene is yfiH [C]

Identifier: 154246491

GI number: 154246491

Start: 2844501

End: 2845268

Strand: Direct

Name: yfiH [C]

Synonym: Xaut_2550

Alternate gene names: 154246491

Gene position: 2844501-2845268 (Clockwise)

Preceding gene: 154246490

Following gene: 154246492

Centisome position: 53.58

GC content: 69.92

Gene sequence:

>768_bases
ATGAAGATCGAGGCCCCCTCGCTCAAGGCCCTGCCCGGCATCCGCCACGCCTTCTTCACCCGGCAGGGCGGGGTCTCGAC
CGGCCTTTATGCGAGCCTCAACGGCGGCATGGGCTCCAATGACGATCCGGCCGCCGTGGCGCAGAACCGCGCCCGCATGG
CGCAGGAGATCGGCATCGCGCCGGAAGCGCTGCTGGCCCTGTGGCAGGTGCATTCGGCCGATCCGGTACTGGCCACCCAG
CCCTGGACCCGCGAGGACGCGCCCAAGGCCGACGCCATAGTCACCACCACGGCGGGCCTCGGCGCGGCGGTGGCGGTGGC
CGATTGCGGCCCGATCCTGTTCGCCGATCCCGATGCCCGCGTGGTGGCCGCCGCCCATTCCGGCTGGAAGGGCGCGGTCT
CGGGCATCATCGGCGCCACGGTGGCGCTGATGGAGCAGCAGGGGGCGAGGCGGGGCAACATCCGCGCCGTCATTGGCCCG
CTCATCCGCCAGCCGAGCTACGAGGTGGGGGAGGATTTCGTTGCCCGCCTGCTTGCCGAGGACAAGGGCTTCGCCCGTTT
CTTCGCGCCGGCGGACCGGGCCCACCATGCCTTGTTCGACCTACCGGGCTTCATCCGCCTGCGGCTGGAGCAGGCGGGCG
TGGGCTTCATCGAGGATCTCGGCATTGATACCTATGCGGACGAGGCCCGCTTCTTCTCCTATCGCCGCACCACCCACCAC
AAGGAAGCTGATTACGGCCGGCTGATCGCCGCCATCACCCTCGCCTGA

Upstream 100 bases:

>100_bases
ATGGGGCGTCTGTTCAAGGTGCTCGTCCTCGCCCATCCTGAAATCGGGCTGCCGCCCGCGTTCGATTCGACCGAGGAATG
GGTGCGATGAGGTGTGCGTC

Downstream 100 bases:

>100_bases
AACCGCCGCCTGACCCTGCCCGGACTGACCGCATGCGCTCCACCGATGCCACCCTTCTCATCGTGCCCGGCTGGCAGGGC
TCCGGCCCCGACCACTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKIEAPSLKALPGIRHAFFTRQGGVSTGLYASLNGGMGSNDDPAAVAQNRARMAQEIGIAPEALLALWQVHSADPVLATQ
PWTREDAPKADAIVTTTAGLGAAVAVADCGPILFADPDARVVAAAHSGWKGAVSGIIGATVALMEQQGARRGNIRAVIGP
LIRQPSYEVGEDFVARLLAEDKGFARFFAPADRAHHALFDLPGFIRLRLEQAGVGFIEDLGIDTYADEARFFSYRRTTHH
KEADYGRLIAAITLA

Sequences:

>Translated_255_residues
MKIEAPSLKALPGIRHAFFTRQGGVSTGLYASLNGGMGSNDDPAAVAQNRARMAQEIGIAPEALLALWQVHSADPVLATQ
PWTREDAPKADAIVTTTAGLGAAVAVADCGPILFADPDARVVAAAHSGWKGAVSGIIGATVALMEQQGARRGNIRAVIGP
LIRQPSYEVGEDFVARLLAEDKGFARFFAPADRAHHALFDLPGFIRLRLEQAGVGFIEDLGIDTYADEARFFSYRRTTHH
KEADYGRLIAAITLA
>Mature_255_residues
MKIEAPSLKALPGIRHAFFTRQGGVSTGLYASLNGGMGSNDDPAAVAQNRARMAQEIGIAPEALLALWQVHSADPVLATQ
PWTREDAPKADAIVTTTAGLGAAVAVADCGPILFADPDARVVAAAHSGWKGAVSGIIGATVALMEQQGARRGNIRAVIGP
LIRQPSYEVGEDFVARLLAEDKGFARFFAPADRAHHALFDLPGFIRLRLEQAGVGFIEDLGIDTYADEARFFSYRRTTHH
KEADYGRLIAAITLA

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=233, Percent_Identity=27.8969957081545, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI190194372, Length=233, Percent_Identity=27.8969957081545, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1788945, Length=255, Percent_Identity=34.5098039215686, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27113; Mature: 27113

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEAPSLKALPGIRHAFFTRQGGVSTGLYASLNGGMGSNDDPAAVAQNRARMAQEIGIA
CCCCCCCCHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
PEALLALWQVHSADPVLATQPWTREDAPKADAIVTTTAGLGAAVAVADCGPILFADPDAR
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCE
VVAAAHSGWKGAVSGIIGATVALMEQQGARRGNIRAVIGPLIRQPSYEVGEDFVARLLAE
EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHC
DKGFARFFAPADRAHHALFDLPGFIRLRLEQAGVGFIEDLGIDTYADEARFFSYRRTTHH
CCCCEEEECCHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHCCC
KEADYGRLIAAITLA
CCCCHHHEEEEEECC
>Mature Secondary Structure
MKIEAPSLKALPGIRHAFFTRQGGVSTGLYASLNGGMGSNDDPAAVAQNRARMAQEIGIA
CCCCCCCCHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
PEALLALWQVHSADPVLATQPWTREDAPKADAIVTTTAGLGAAVAVADCGPILFADPDAR
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCE
VVAAAHSGWKGAVSGIIGATVALMEQQGARRGNIRAVIGPLIRQPSYEVGEDFVARLLAE
EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHC
DKGFARFFAPADRAHHALFDLPGFIRLRLEQAGVGFIEDLGIDTYADEARFFSYRRTTHH
CCCCEEEECCHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHCCC
KEADYGRLIAAITLA
CCCCHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]