| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yqeW [H]
Identifier: 154246469
GI number: 154246469
Start: 2825411
End: 2827060
Strand: Direct
Name: yqeW [H]
Synonym: Xaut_2528
Alternate gene names: 154246469
Gene position: 2825411-2827060 (Clockwise)
Preceding gene: 154246468
Following gene: 154246470
Centisome position: 53.22
GC content: 69.76
Gene sequence:
>1650_bases ATGGCGATCATTGCGCAAATTCTCGCCGGGCTGGGCCTGCTCTTCGTCGGACTGAAAATCATGTCGACGCACCTGCAGCA GGCCACGGGCCGGCGGGTGCGGCACCTGCTGCGCACCGCCACCCGCTCGCCGTTCGCGGGGCTGCTGTGCGGAACGCTCG CCGGGGCGGCGACCCAGTCGTCAAACGCGGTGGCGGTCATCAGCGGCAATCTGGTGCGCGGCGGGGTGCTCGCCACCCGT GACGCCATCCCCATCGTGGCCGGCGGCAACGTGGGCACCGCCGCCCTGGTGTTCGTGGCCGCCATCGATTTCCGCCTGCT GGTGCTCTACCTGGTGGCGATGGTGGGCTTCGGCTTCCAGTTCAAGCTCGACCGCCGCCCGGCTTTCAAGGAATGGATGG GCGTCGCCCTCGGCCTCGCCCTGGTGCTGCTGGGGCTCGACTATATCAAGCAGGGGCCGCGCGCCCTCGACGTGAGCGCG CTGGCGGCATTCCTCGACACTGGCATCTCGCCGTGGGTCGGCTTCCTGCTGGGGCTCATCGCCGCCGCCGTCAGCCAGTC CTCGTCCACGCCCACCATCCTGGTGGTGGCGCTGATGCAGTCCCAGGTGCTCGGCCTTGATGATTCTATCGTCATCGTGA TGGGCGCCAATCTCGGCTCGGGCATCTCCGCCGTGCTCACCGCCGGGGAGCTGGAGGGCACCGGGCGGCAGCTGTGCTAC GTGCACGTGCTGGTGAAGGCGGTGGGCTGCCTCCTCGTCGGCGCGGGTTTTCTGGCCGCCGGGTGGCTCGGGGCCGAGCC GGTGGCCCTGCTGTCGCAGATGGGCGGGGGAAAGGCCTCGGCCTCCTTGTCCCTGCTGTTCCTGGCGCTGCAGGTGGCCG GCGCCGTGCCGGTTTCCTTCGCCCGTGGGGTGACCGAGGCCATCGCAGCGCGGCTGAGCCCGCCCACCATGGAGGACGGC GCCTCCAAACCCCGCTTCATCCACGAGCGAGCGCTGGGCGATTTCGCCACCGCCCTCGATCTGGCCGAACAGGAGATCAT GCGGCTGGTGAAGCTCTTGCCCACCCTGCTGCCGGACCTCGACCAGCAGGACCAAAGCGGGCCGGCGGAGCGGCTGGCCC TGTGGCGGGGCGCCAACGCCATCGGCGTCGACATCGAACAGTTCCTGTCCGATCTCATCGCCCGTGGCGTGCCGAGGGGC AGCCTTGAGACTGCCCTGCATCTGCAGGCGCTGGTGGAAACCGTGCGCACCCTGCAGGACACGCTGCACGCCTTCACCGA GGTGGTGGAGGGCTTTGCCGACCTGCCGCCCCTCGGCTTCAACCTGTCCGAATCCCTGCGCACCATCATCCTGTCACTGG CCGACGCCACCGACGGCGATGCGGAGGACCTCGACCTCATCATCACGCTGGCGGGCGACCGCAGCGACCTCTTGAGCCGC ATCCGCCGCCAGCTCGCGGCCTCGGCGCTGGGCACGGGGGAGGACGCGCGCCAGCTCCTGCTTGCCACCAGCCTGTTCGA GCGCGGCGTCTGGCTGGTGCGGCGCGGCGCAGTGGCGTTGCGTGCTCCCGAGAATGAGGCTAATCCCGTGGTCAACGCGG CCTCCGGCGAGGCGCGCAAGCGAGAAGAGGCCGATGCACATCGAACGTGA
Upstream 100 bases:
>100_bases CATCGCGGGTGCCGTCATGTGGTCGTCGTCATAATGATACAGACCTGCCCCAGAATGTGCGGTCATCCCGCATCTGGACG GAGGGCGCTGCAAAACAGCC
Downstream 100 bases:
>100_bases GCAGCTCGGGTCCGAGGTGGTGCTGAAGGTGGCGGGACGGCTCGATACGCCCAACGCGAAGCCGTTCGAGGCGAGCCTCA TGGAAGTGGTGACCACCACC
Product: Na+/H+ antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MAIIAQILAGLGLLFVGLKIMSTHLQQATGRRVRHLLRTATRSPFAGLLCGTLAGAATQSSNAVAVISGNLVRGGVLATR DAIPIVAGGNVGTAALVFVAAIDFRLLVLYLVAMVGFGFQFKLDRRPAFKEWMGVALGLALVLLGLDYIKQGPRALDVSA LAAFLDTGISPWVGFLLGLIAAAVSQSSSTPTILVVALMQSQVLGLDDSIVIVMGANLGSGISAVLTAGELEGTGRQLCY VHVLVKAVGCLLVGAGFLAAGWLGAEPVALLSQMGGGKASASLSLLFLALQVAGAVPVSFARGVTEAIAARLSPPTMEDG ASKPRFIHERALGDFATALDLAEQEIMRLVKLLPTLLPDLDQQDQSGPAERLALWRGANAIGVDIEQFLSDLIARGVPRG SLETALHLQALVETVRTLQDTLHAFTEVVEGFADLPPLGFNLSESLRTIILSLADATDGDAEDLDLIITLAGDRSDLLSR IRRQLAASALGTGEDARQLLLATSLFERGVWLVRRGAVALRAPENEANPVVNAASGEARKREEADAHRT
Sequences:
>Translated_549_residues MAIIAQILAGLGLLFVGLKIMSTHLQQATGRRVRHLLRTATRSPFAGLLCGTLAGAATQSSNAVAVISGNLVRGGVLATR DAIPIVAGGNVGTAALVFVAAIDFRLLVLYLVAMVGFGFQFKLDRRPAFKEWMGVALGLALVLLGLDYIKQGPRALDVSA LAAFLDTGISPWVGFLLGLIAAAVSQSSSTPTILVVALMQSQVLGLDDSIVIVMGANLGSGISAVLTAGELEGTGRQLCY VHVLVKAVGCLLVGAGFLAAGWLGAEPVALLSQMGGGKASASLSLLFLALQVAGAVPVSFARGVTEAIAARLSPPTMEDG ASKPRFIHERALGDFATALDLAEQEIMRLVKLLPTLLPDLDQQDQSGPAERLALWRGANAIGVDIEQFLSDLIARGVPRG SLETALHLQALVETVRTLQDTLHAFTEVVEGFADLPPLGFNLSESLRTIILSLADATDGDAEDLDLIITLAGDRSDLLSR IRRQLAASALGTGEDARQLLLATSLFERGVWLVRRGAVALRAPENEANPVVNAASGEARKREEADAHRT >Mature_548_residues AIIAQILAGLGLLFVGLKIMSTHLQQATGRRVRHLLRTATRSPFAGLLCGTLAGAATQSSNAVAVISGNLVRGGVLATRD AIPIVAGGNVGTAALVFVAAIDFRLLVLYLVAMVGFGFQFKLDRRPAFKEWMGVALGLALVLLGLDYIKQGPRALDVSAL AAFLDTGISPWVGFLLGLIAAAVSQSSSTPTILVVALMQSQVLGLDDSIVIVMGANLGSGISAVLTAGELEGTGRQLCYV HVLVKAVGCLLVGAGFLAAGWLGAEPVALLSQMGGGKASASLSLLFLALQVAGAVPVSFARGVTEAIAARLSPPTMEDGA SKPRFIHERALGDFATALDLAEQEIMRLVKLLPTLLPDLDQQDQSGPAERLALWRGANAIGVDIEQFLSDLIARGVPRGS LETALHLQALVETVRTLQDTLHAFTEVVEGFADLPPLGFNLSESLRTIILSLADATDGDAEDLDLIITLAGDRSDLLSRI RRQLAASALGTGEDARQLLLATSLFERGVWLVRRGAVALRAPENEANPVVNAASGEARKREEADAHRT
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjbB [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 57438; Mature: 57306
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIAQILAGLGLLFVGLKIMSTHLQQATGRRVRHLLRTATRSPFAGLLCGTLAGAATQS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC SNAVAVISGNLVRGGVLATRDAIPIVAGGNVGTAALVFVAAIDFRLLVLYLVAMVGFGFQ CCEEEEEECCEEECCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE FKLDRRPAFKEWMGVALGLALVLLGLDYIKQGPRALDVSALAAFLDTGISPWVGFLLGLI EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH AAAVSQSSSTPTILVVALMQSQVLGLDDSIVIVMGANLGSGISAVLTAGELEGTGRQLCY HHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCHHHHH VHVLVKAVGCLLVGAGFLAAGWLGAEPVALLSQMGGGKASASLSLLFLALQVAGAVPVSF HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH ARGVTEAIAARLSPPTMEDGASKPRFIHERALGDFATALDLAEQEIMRLVKLLPTLLPDL HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DQQDQSGPAERLALWRGANAIGVDIEQFLSDLIARGVPRGSLETALHLQALVETVRTLQD CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TLHAFTEVVEGFADLPPLGFNLSESLRTIILSLADATDGDAEDLDLIITLAGDRSDLLSR HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHH IRRQLAASALGTGEDARQLLLATSLFERGVWLVRRGAVALRAPENEANPVVNAASGEARK HHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCCCCCEECCCCCHHH REEADAHRT HHHHHCCCC >Mature Secondary Structure AIIAQILAGLGLLFVGLKIMSTHLQQATGRRVRHLLRTATRSPFAGLLCGTLAGAATQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC SNAVAVISGNLVRGGVLATRDAIPIVAGGNVGTAALVFVAAIDFRLLVLYLVAMVGFGFQ CCEEEEEECCEEECCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE FKLDRRPAFKEWMGVALGLALVLLGLDYIKQGPRALDVSALAAFLDTGISPWVGFLLGLI EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH AAAVSQSSSTPTILVVALMQSQVLGLDDSIVIVMGANLGSGISAVLTAGELEGTGRQLCY HHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCHHHHH VHVLVKAVGCLLVGAGFLAAGWLGAEPVALLSQMGGGKASASLSLLFLALQVAGAVPVSF HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH ARGVTEAIAARLSPPTMEDGASKPRFIHERALGDFATALDLAEQEIMRLVKLLPTLLPDL HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DQQDQSGPAERLALWRGANAIGVDIEQFLSDLIARGVPRGSLETALHLQALVETVRTLQD CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TLHAFTEVVEGFADLPPLGFNLSESLRTIILSLADATDGDAEDLDLIITLAGDRSDLLSR HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHH IRRQLAASALGTGEDARQLLLATSLFERGVWLVRRGAVALRAPENEANPVVNAASGEARK HHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCCCCCEECCCCCHHH REEADAHRT HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9023197; 9384377 [H]