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The map label for this gene is 154245944

Identifier: 154245944

GI number: 154245944

Start: 2258002

End: 2258757

Strand: Reverse

Name: 154245944

Synonym: Xaut_2001

Alternate gene names: NA

Gene position: 2258757-2258002 (Counterclockwise)

Preceding gene: 154245945

Following gene: 154245943

Centisome position: 42.55

GC content: 66.14

Gene sequence:

>756_bases
ATGAGCGGACTGGGAGCGCGGCAATTCCTTCTGCGCAAGGCGCCGGAGCACGGCCATCACGCGGTGACCTTCATCGAGCT
GTTCTTCGATCTGGTCTTCGTCTTCGCCATCACTCAGCTGTCCCACCATCTGCTGCACGACCTCTCGGTGATCGGGCTGC
TGCAGACGCTGGTCCTGTTCGTCGCCGTCTGGTGGGCGTGGATCGACACCGCCTGGGTCACCAACTGGCTCGATCCGGAT
CGCAAGCCGGTGCGGCTCATGTTGCTGGCGCTGATGCTGGTGGGCCTCGTCTTGTCCGCGTCCCTGCCGAAGGCTTTCCA
TGAGGGCGGCCTTGCCTTCGCCCTCGCTTATGCGACGTTCCAGACGGGGCGCTCCGCCTTTACCATCTGGGCGGTGGCGC
GCCACGATCGCGCCCAATCCCTGAACTTCAAGCGCATCCTGGCATGGCAGGCATTGGCGTCCGTGCTGTGGATCGTCGGC
GCCTTCCTGCACGGCGAGGCCCGGCTCGGCCTGTGGATGCTCGCCGTGGTGCTGGAGAGCCTCGCGCCCTCCACCGGCTT
CTTCGTGCCGGGCCTCGGCGCCTCCAAGGCGGCGGACTGGAAGGTGGAGGGCCGGCACCTGTCCGAGCGCTGCGCCCTGT
TCATCATCATCGCACTGGGCGAATCCATCCTCGTCACCGGCGCCACCGCCTCCGACCTCGCGTGGACCGGCCTCAACCCA
CATTTCCCAAGTAAGGCGCTGATTTCGCTGTCCTGA

Upstream 100 bases:

>100_bases
TACCGATTGATCTGCCGCCCGTGGGGATGCGAAAACACGGGTCACCGGGATATCCGGCACTTGCTCCGCTGTCGCGCGGG
CCAGCGCTGCGGGAGGTGGC

Downstream 100 bases:

>100_bases
CCATTATATTTCCTATATAAAACATGGTGTTGAAGGCTACGAGGGGCGCGTTTCATGGATCACCCAGAGGGTGCGGGCTT
GCAACGGGCAGATCGGGTGG

Product: low temperature requirement A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGLGARQFLLRKAPEHGHHAVTFIELFFDLVFVFAITQLSHHLLHDLSVIGLLQTLVLFVAVWWAWIDTAWVTNWLDPD
RKPVRLMLLALMLVGLVLSASLPKAFHEGGLAFALAYATFQTGRSAFTIWAVARHDRAQSLNFKRILAWQALASVLWIVG
AFLHGEARLGLWMLAVVLESLAPSTGFFVPGLGASKAADWKVEGRHLSERCALFIIIALGESILVTGATASDLAWTGLNP
HFPSKALISLS

Sequences:

>Translated_251_residues
MSGLGARQFLLRKAPEHGHHAVTFIELFFDLVFVFAITQLSHHLLHDLSVIGLLQTLVLFVAVWWAWIDTAWVTNWLDPD
RKPVRLMLLALMLVGLVLSASLPKAFHEGGLAFALAYATFQTGRSAFTIWAVARHDRAQSLNFKRILAWQALASVLWIVG
AFLHGEARLGLWMLAVVLESLAPSTGFFVPGLGASKAADWKVEGRHLSERCALFIIIALGESILVTGATASDLAWTGLNP
HFPSKALISLS
>Mature_250_residues
SGLGARQFLLRKAPEHGHHAVTFIELFFDLVFVFAITQLSHHLLHDLSVIGLLQTLVLFVAVWWAWIDTAWVTNWLDPDR
KPVRLMLLALMLVGLVLSASLPKAFHEGGLAFALAYATFQTGRSAFTIWAVARHDRAQSLNFKRILAWQALASVLWIVGA
FLHGEARLGLWMLAVVLESLAPSTGFFVPGLGASKAADWKVEGRHLSERCALFIIIALGESILVTGATASDLAWTGLNPH
FPSKALISLS

Specific function: Unknown

COG id: COG4292

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010640 [H]

Pfam domain/function: PF06772 LtrA [H]

EC number: NA

Molecular weight: Translated: 27570; Mature: 27438

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLGARQFLLRKAPEHGHHAVTFIELFFDLVFVFAITQLSHHLLHDLSVIGLLQTLVLF
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVWWAWIDTAWVTNWLDPDRKPVRLMLLALMLVGLVLSASLPKAFHEGGLAFALAYATF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHH
QTGRSAFTIWAVARHDRAQSLNFKRILAWQALASVLWIVGAFLHGEARLGLWMLAVVLES
HCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LAPSTGFFVPGLGASKAADWKVEGRHLSERCALFIIIALGESILVTGATASDLAWTGLNP
HCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHEECCCEEEEECCCHHCCEECCCCC
HFPSKALISLS
CCCCCCEEECC
>Mature Secondary Structure 
SGLGARQFLLRKAPEHGHHAVTFIELFFDLVFVFAITQLSHHLLHDLSVIGLLQTLVLF
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVWWAWIDTAWVTNWLDPDRKPVRLMLLALMLVGLVLSASLPKAFHEGGLAFALAYATF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHH
QTGRSAFTIWAVARHDRAQSLNFKRILAWQALASVLWIVGAFLHGEARLGLWMLAVVLES
HCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LAPSTGFFVPGLGASKAADWKVEGRHLSERCALFIIIALGESILVTGATASDLAWTGLNP
HCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHEECCCEEEEECCCHHCCEECCCCC
HFPSKALISLS
CCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9204561; 11481432 [H]