| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is wza [C]
Identifier: 154245902
GI number: 154245902
Start: 2215151
End: 2216011
Strand: Reverse
Name: wza [C]
Synonym: Xaut_1959
Alternate gene names: 154245902
Gene position: 2216011-2215151 (Counterclockwise)
Preceding gene: 154245903
Following gene: 154245901
Centisome position: 41.74
GC content: 65.04
Gene sequence:
>861_bases ATGGTCTTGCCAGAATGCGGCGTGGTGAACACCGCTCGCGGCCCGGCCCGGAAAGACCGATTTCGGGCGCGGGGGGCACG GCGCAGGGTCGCCCTTGCCCTCCTCGGATTGAGCCTCGCGCTCAACGGCTGCGCCGCAATCGCCAGTTCCCAGAGCACCG GCACCGAGCCGTTCACCACCGGCCACGAGCTGCGCTTCACCGAGGTGAACGCCGAGCGCTTCAAGCCGTGGAGCGACCAG GTGCCGAGCTATCGGCTGGGGCCCGGTGACAAGATCAAGATCAAGTATTTCATCACCCGCGAGATGGATGAGGACCTGAC CGTAAGCCCGGACGGCTCCATCGCGCCGCGCGCCATCGGCCAGATCCGGGTGGAAGGTTCCACCCTCTCCGGGGTGCAGG ATTATGTGCGGCGCGAATCACGCAAGGAGCTGACCGACCAGAAAGTGGTGGTCTCGCTGGAGGAAGCCTCCTCGGCCCGC GTCTATGTGGGCGGCATGGTGGCCCATCCCGGCGCCTTCAAGCTCGCCGACATGGGCACCAGCGTGCTCCAGGGCATCCT GCTCGCCGGTGGCTTCACCGAGGAATCGCGCACCGGGCAGGTGGCGCTCATCCGCCGTGGCCCAAACAACGAGCCCATGC TGCGCCTCGTCAATGTGCGCGACGTGATCCAGACCGGATTCGATGCCAACGACGTTCCGCTGGTGAGCGGCGACATCATC TATGTGCCGCGTTCGTCCATCGCGGAGGTCAATCTGTGGATTGACCAGTTCATCAACAAGGTGGTGCCGTTCCAGCGCCA GTTCAGCTATACGATCGGCTCCTATTCCACCACCGGCGGCGGAACCTCGATCGTGCCGTAA
Upstream 100 bases:
>100_bases CCTGAGATTTGCCGCGTCGTCCGCCGTCGAAACCGGACGGGACGCACGTCAAAACCACGGCATTAACCTTTTGAATACGA TTAGGCGCGGGAGTTGGTCG
Downstream 100 bases:
>100_bases CCTCTTAGCTTGACGCGTTTTCTTGGCGCGGACCGGCCGCCCCATGGTCCGGCCCGCGCTCCAGACGGGTCCGGCGCGAC TGCCCCCGCGCCGGGTGTCA
Product: polysaccharide export protein
Products: NA
Alternate protein names: Polysaccharide Biosynthesis/Export Protein; Polysaccharide Biosynthesis Protein; Polysaccharide Biosynthesis/Export Lipoprotein; Polysialic Acid Transporter KpsD; Polysaccharide Export Periplasmic Protein; Polysaccharide Secretin Protein HfsD; Capsular Polysaccharide Export Protein; Polysaccharide Export Protein Outer Membrane; Periplasmic Protein; Capsule Polysaccharide Export System Periplasmic Protein
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MVLPECGVVNTARGPARKDRFRARGARRRVALALLGLSLALNGCAAIASSQSTGTEPFTTGHELRFTEVNAERFKPWSDQ VPSYRLGPGDKIKIKYFITREMDEDLTVSPDGSIAPRAIGQIRVEGSTLSGVQDYVRRESRKELTDQKVVVSLEEASSAR VYVGGMVAHPGAFKLADMGTSVLQGILLAGGFTEESRTGQVALIRRGPNNEPMLRLVNVRDVIQTGFDANDVPLVSGDII YVPRSSIAEVNLWIDQFINKVVPFQRQFSYTIGSYSTTGGGTSIVP
Sequences:
>Translated_286_residues MVLPECGVVNTARGPARKDRFRARGARRRVALALLGLSLALNGCAAIASSQSTGTEPFTTGHELRFTEVNAERFKPWSDQ VPSYRLGPGDKIKIKYFITREMDEDLTVSPDGSIAPRAIGQIRVEGSTLSGVQDYVRRESRKELTDQKVVVSLEEASSAR VYVGGMVAHPGAFKLADMGTSVLQGILLAGGFTEESRTGQVALIRRGPNNEPMLRLVNVRDVIQTGFDANDVPLVSGDII YVPRSSIAEVNLWIDQFINKVVPFQRQFSYTIGSYSTTGGGTSIVP >Mature_286_residues MVLPECGVVNTARGPARKDRFRARGARRRVALALLGLSLALNGCAAIASSQSTGTEPFTTGHELRFTEVNAERFKPWSDQ VPSYRLGPGDKIKIKYFITREMDEDLTVSPDGSIAPRAIGQIRVEGSTLSGVQDYVRRESRKELTDQKVVVSLEEASSAR VYVGGMVAHPGAFKLADMGTSVLQGILLAGGFTEESRTGQVALIRRGPNNEPMLRLVNVRDVIQTGFDANDVPLVSGDII YVPRSSIAEVNLWIDQFINKVVPFQRQFSYTIGSYSTTGGGTSIVP
Specific function: Probably Involved In The Export Of The Extracellular Polysaccharide Colanic Acid From The Cell To Medium. [C]
COG id: COG1596
COG function: function code M; Periplasmic protein involved in polysaccharide export
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788376, Length=178, Percent_Identity=25.8426966292135, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31090; Mature: 31090
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLPECGVVNTARGPARKDRFRARGARRRVALALLGLSLALNGCAAIASSQSTGTEPFTT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GHELRFTEVNAERFKPWSDQVPSYRLGPGDKIKIKYFITREMDEDLTVSPDGSIAPRAIG CCEEEEEECCHHHCCCCHHCCCCEECCCCCEEEEEEEEEECCCCCEEECCCCCCCCCCEE QIRVEGSTLSGVQDYVRRESRKELTDQKVVVSLEEASSARVYVGGMVAHPGAFKLADMGT EEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEECCCCEEHHHHCH SVLQGILLAGGFTEESRTGQVALIRRGPNNEPMLRLVNVRDVIQTGFDANDVPLVSGDII HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEECHHHHHHCCCCCCCCEEECCCEE YVPRSSIAEVNLWIDQFINKVVPFQRQFSYTIGSYSTTGGGTSIVP EECCCCCHHHHHHHHHHHHHHCCCHHHHEEEECCEEECCCCCCCCC >Mature Secondary Structure MVLPECGVVNTARGPARKDRFRARGARRRVALALLGLSLALNGCAAIASSQSTGTEPFTT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GHELRFTEVNAERFKPWSDQVPSYRLGPGDKIKIKYFITREMDEDLTVSPDGSIAPRAIG CCEEEEEECCHHHCCCCHHCCCCEECCCCCEEEEEEEEEECCCCCEEECCCCCCCCCCEE QIRVEGSTLSGVQDYVRRESRKELTDQKVVVSLEEASSARVYVGGMVAHPGAFKLADMGT EEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEECCCCEEHHHHCH SVLQGILLAGGFTEESRTGQVALIRRGPNNEPMLRLVNVRDVIQTGFDANDVPLVSGDII HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEECHHHHHHCCCCCCCCEEECCCEE YVPRSSIAEVNLWIDQFINKVVPFQRQFSYTIGSYSTTGGGTSIVP EECCCCCHHHHHHHHHHHHHHCCCHHHHEEEECCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA