Click here to switch to the map view.

The map label for this gene is oxaA [H]

Identifier: 154245865

GI number: 154245865

Start: 2172623

End: 2174473

Strand: Reverse

Name: oxaA [H]

Synonym: Xaut_1921

Alternate gene names: 154245865

Gene position: 2174473-2172623 (Counterclockwise)

Preceding gene: 154245866

Following gene: 154245864

Centisome position: 40.96

GC content: 65.59

Gene sequence:

>1851_bases
ATGAGTGACAACCGCAACATGTTCATCGCCATCGGCTTGTCGCTGGCGATCCTCATTGGCTGGCAGTTCTTCTTCGGCAT
TCCACAGGCCGAGCGCCAGCGCCAGGCCGCCGAGCAGCAGCGCATCGCCCAGCAGGCGCAGCAGCCGGCGCCCGGCGCCA
CCCCCGGCGCCACCCCTGGCACGACAGCCGGCGCAGCACCGGGAGCCACGCCCGGCTCGGCCGGCGTGCCGCAGGCGGGC
AGCCCGGTCCCGGCGCGGCCCCTGACCCGCGAGGAAGCCCTCGCCCTGACCCCCCGCGCCGCCATCGAGACCCAGCGCCT
GAAGGGCTCCATCGCGCTCAAGGGCGGTCGCGTGGACGACCTGCTGCTCACCGAGTACCACGAGACGGTGGACCCCAAGA
GCCCGAACATCGTGCTCCTGTCCCCCTCCGGCGCGCCCAATCCCTTCTATGCGGAATTCGGCTGGACCGCGGCCGCCGGC
ACCGGCGTCAAGGTGCCCGGCCCCGACACCGTGTGGACCACCAGCGGCACCCTGACCGAGAAGACCCCGCTGACACTCAG
CTGGGACAACGGCGCGGGCCTGATCTTCCACCGCACCTACACCATCGACGACCATTACATGTTCGCGGTGAAGGACGAGG
TGGAGAACAAGACCGGCGCGGCGGTGACGCTCTATCCCTACGCCCTCGTCTCCCGCCATGGCATCCCGCACGTGGCCGGC
TTCTACATCCTGCACGAAGGCCTCATCGGCGTGCTGGGTGACAGCGGCCTGCAGGAGATCACCTACGCCAAGATGGACAA
GGAGAAGCCCCACACCTTCGCCGCCACCGGCGGCTGGCTGGGCATCACCGACAAATACTGGGCGGCCACCGTCATCCCCG
ACCAGAGCGTGAAGGTGGACGCCAAGTTCTCCACCTCCACCTTCGCCGGCACCCAGACCTTCCAGGCCGATTATCTGGCC
GCCCCGCTCACCGTGGAGCCCGGCGCCACCGTCGCCGCCAAGGGCCAGTTGTTCGCCGGCGCCAAGGTGGTGCAGGTGGT
AGACGGCTACAAGACGAAGTACGGCATCGACCGCTTCGACCTGCTCATCGACTGGGGCTGGTTCTACTTCATCACCAAGC
CGCTGTTCCTCGCCATCGACTGGCTCTATCGCCTGGTGGGCAATTTCGGCGTCGCCATCCTGATCATCACGGTGGCGCTG
AAGGGCCTGTTCTTCCCGCTCGCTAACAAGTCCTACGCCTCCATGGCGAAGATGAAGGCGGTGCAGCCGGAAGTGACCGC
CATCCGCGAGCGCTACGCCGACGACAAGGTGAAGCAGCAGCAGGCGCTGATGGAGCTGTACAAGAAAGAGAAGATCAATC
CGGTGGCGGGCTGCCTGCCCATCGTGATCCAGATCCCGGTCTTCTTCGCCCTGTACAAGGTGCTGTTCGTGACCATCGAG
ATGCGGCACGCGCCCTTCTTCGGCTGGATCCGCGACCTCTCGGCGCCCGACCCCACCACCATTTTCAACCTGTTCGGGCT
CATCCCGTGGGATCCGTCCTCGGTCCCGGTGCTTGGTGGCTACCTGATGCTGGGCGCCTGGCCCATCATCATGGGCATCA
CCATGTGGGTGCAGATGAAGCTGAACCCGGCCCCGCCGGACCCCACCCAGCAGATGATCTTCAACTGGATGCCCATCATC
TTCACCTTCATGCTGGCCCATTTCGCCGCAGGCCTGGTGATCTACTGGGCGTGGAACAACACGCTCTCGGTCAGCCAGCA
GGCCATGATCATGAAGCGCAACGGCGTGAAGATCGAACTGTGGGACAACATCAAGTCGGCCTTCAAGAAGAAGCAGCCGG
CCAAGGGATAG

Upstream 100 bases:

>100_bases
AGCACCCCGCGTCCACCGGAGGGGCCGGCGCCGCGGCCGGCGCGCCCACCCCCCCATCCGACGACATTAAGCCGACGCCC
GCCGACGGAGGCCTTCCGGC

Downstream 100 bases:

>100_bases
CCACTCAGTTGGTCCCAACGGGATCGAAGCGCCGCGCTCCCCCGAGCGCGGCGCTTCTGTTTTACGGCAACAGGTGACCA
TATTGACACGTTACTAATTT

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 615

Protein sequence:

>616_residues
MSDNRNMFIAIGLSLAILIGWQFFFGIPQAERQRQAAEQQRIAQQAQQPAPGATPGATPGTTAGAAPGATPGSAGVPQAG
SPVPARPLTREEALALTPRAAIETQRLKGSIALKGGRVDDLLLTEYHETVDPKSPNIVLLSPSGAPNPFYAEFGWTAAAG
TGVKVPGPDTVWTTSGTLTEKTPLTLSWDNGAGLIFHRTYTIDDHYMFAVKDEVENKTGAAVTLYPYALVSRHGIPHVAG
FYILHEGLIGVLGDSGLQEITYAKMDKEKPHTFAATGGWLGITDKYWAATVIPDQSVKVDAKFSTSTFAGTQTFQADYLA
APLTVEPGATVAAKGQLFAGAKVVQVVDGYKTKYGIDRFDLLIDWGWFYFITKPLFLAIDWLYRLVGNFGVAILIITVAL
KGLFFPLANKSYASMAKMKAVQPEVTAIRERYADDKVKQQQALMELYKKEKINPVAGCLPIVIQIPVFFALYKVLFVTIE
MRHAPFFGWIRDLSAPDPTTIFNLFGLIPWDPSSVPVLGGYLMLGAWPIIMGITMWVQMKLNPAPPDPTQQMIFNWMPII
FTFMLAHFAAGLVIYWAWNNTLSVSQQAMIMKRNGVKIELWDNIKSAFKKKQPAKG

Sequences:

>Translated_616_residues
MSDNRNMFIAIGLSLAILIGWQFFFGIPQAERQRQAAEQQRIAQQAQQPAPGATPGATPGTTAGAAPGATPGSAGVPQAG
SPVPARPLTREEALALTPRAAIETQRLKGSIALKGGRVDDLLLTEYHETVDPKSPNIVLLSPSGAPNPFYAEFGWTAAAG
TGVKVPGPDTVWTTSGTLTEKTPLTLSWDNGAGLIFHRTYTIDDHYMFAVKDEVENKTGAAVTLYPYALVSRHGIPHVAG
FYILHEGLIGVLGDSGLQEITYAKMDKEKPHTFAATGGWLGITDKYWAATVIPDQSVKVDAKFSTSTFAGTQTFQADYLA
APLTVEPGATVAAKGQLFAGAKVVQVVDGYKTKYGIDRFDLLIDWGWFYFITKPLFLAIDWLYRLVGNFGVAILIITVAL
KGLFFPLANKSYASMAKMKAVQPEVTAIRERYADDKVKQQQALMELYKKEKINPVAGCLPIVIQIPVFFALYKVLFVTIE
MRHAPFFGWIRDLSAPDPTTIFNLFGLIPWDPSSVPVLGGYLMLGAWPIIMGITMWVQMKLNPAPPDPTQQMIFNWMPII
FTFMLAHFAAGLVIYWAWNNTLSVSQQAMIMKRNGVKIELWDNIKSAFKKKQPAKG
>Mature_615_residues
SDNRNMFIAIGLSLAILIGWQFFFGIPQAERQRQAAEQQRIAQQAQQPAPGATPGATPGTTAGAAPGATPGSAGVPQAGS
PVPARPLTREEALALTPRAAIETQRLKGSIALKGGRVDDLLLTEYHETVDPKSPNIVLLSPSGAPNPFYAEFGWTAAAGT
GVKVPGPDTVWTTSGTLTEKTPLTLSWDNGAGLIFHRTYTIDDHYMFAVKDEVENKTGAAVTLYPYALVSRHGIPHVAGF
YILHEGLIGVLGDSGLQEITYAKMDKEKPHTFAATGGWLGITDKYWAATVIPDQSVKVDAKFSTSTFAGTQTFQADYLAA
PLTVEPGATVAAKGQLFAGAKVVQVVDGYKTKYGIDRFDLLIDWGWFYFITKPLFLAIDWLYRLVGNFGVAILIITVALK
GLFFPLANKSYASMAKMKAVQPEVTAIRERYADDKVKQQQALMELYKKEKINPVAGCLPIVIQIPVFFALYKVLFVTIEM
RHAPFFGWIRDLSAPDPTTIFNLFGLIPWDPSSVPVLGGYLMLGAWPIIMGITMWVQMKLNPAPPDPTQQMIFNWMPIIF
TFMLAHFAAGLVIYWAWNNTLSVSQQAMIMKRNGVKIELWDNIKSAFKKKQPAKG

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=510, Percent_Identity=30.1960784313725, Blast_Score=235, Evalue=6e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 67423; Mature: 67292

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNRNMFIAIGLSLAILIGWQFFFGIPQAERQRQAAEQQRIAQQAQQPAPGATPGATPG
CCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TTAGAAPGATPGSAGVPQAGSPVPARPLTREEALALTPRAAIETQRLKGSIALKGGRVDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCHHHHHHHHCCCEEEECCCCCCH
LLLTEYHETVDPKSPNIVLLSPSGAPNPFYAEFGWTAAAGTGVKVPGPDTVWTTSGTLTE
HHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCEEECCCCCCCCCCCCEEECCCCEEC
KTPLTLSWDNGAGLIFHRTYTIDDHYMFAVKDEVENKTGAAVTLYPYALVSRHGIPHVAG
CCCEEEEECCCCEEEEEEEEEECCCEEEEEEHHCCCCCCCEEEEEHHHHHHCCCCCHHHH
FYILHEGLIGVLGDSGLQEITYAKMDKEKPHTFAATGGWLGITDKYWAATVIPDQSVKVD
HHHHHHHHHEECCCCCHHHHHHHHCCCCCCCEEEECCCEECCCCCCEEEEECCCCCEEEE
AKFSTSTFAGTQTFQADYLAAPLTVEPGATVAAKGQLFAGAKVVQVVDGYKTKYGIDRFD
EEECCCCCCCCCEECHHHEECCEEECCCCCEEECCCEECCCHHHHHHCCCHHHCCCCCEE
LLIDWGWFYFITKPLFLAIDWLYRLVGNFGVAILIITVALKGLFFPLANKSYASMAKMKA
EEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VQPEVTAIRERYADDKVKQQQALMELYKKEKINPVAGCLPIVIQIPVFFALYKVLFVTIE
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
MRHAPFFGWIRDLSAPDPTTIFNLFGLIPWDPSSVPVLGGYLMLGAWPIIMGITMWVQMK
ECCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEE
LNPAPPDPTQQMIFNWMPIIFTFMLAHFAAGLVIYWAWNNTLSVSQQAMIMKRNGVKIEL
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHEEECCCCEEEE
WDNIKSAFKKKQPAKG
HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SDNRNMFIAIGLSLAILIGWQFFFGIPQAERQRQAAEQQRIAQQAQQPAPGATPGATPG
CCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TTAGAAPGATPGSAGVPQAGSPVPARPLTREEALALTPRAAIETQRLKGSIALKGGRVDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCHHHHHHHHCCCEEEECCCCCCH
LLLTEYHETVDPKSPNIVLLSPSGAPNPFYAEFGWTAAAGTGVKVPGPDTVWTTSGTLTE
HHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCEEECCCCCCCCCCCCEEECCCCEEC
KTPLTLSWDNGAGLIFHRTYTIDDHYMFAVKDEVENKTGAAVTLYPYALVSRHGIPHVAG
CCCEEEEECCCCEEEEEEEEEECCCEEEEEEHHCCCCCCCEEEEEHHHHHHCCCCCHHHH
FYILHEGLIGVLGDSGLQEITYAKMDKEKPHTFAATGGWLGITDKYWAATVIPDQSVKVD
HHHHHHHHHEECCCCCHHHHHHHHCCCCCCCEEEECCCEECCCCCCEEEEECCCCCEEEE
AKFSTSTFAGTQTFQADYLAAPLTVEPGATVAAKGQLFAGAKVVQVVDGYKTKYGIDRFD
EEECCCCCCCCCEECHHHEECCEEECCCCCEEECCCEECCCHHHHHHCCCHHHCCCCCEE
LLIDWGWFYFITKPLFLAIDWLYRLVGNFGVAILIITVALKGLFFPLANKSYASMAKMKA
EEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VQPEVTAIRERYADDKVKQQQALMELYKKEKINPVAGCLPIVIQIPVFFALYKVLFVTIE
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
MRHAPFFGWIRDLSAPDPTTIFNLFGLIPWDPSSVPVLGGYLMLGAWPIIMGITMWVQMK
ECCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEE
LNPAPPDPTQQMIFNWMPIIFTFMLAHFAAGLVIYWAWNNTLSVSQQAMIMKRNGVKIEL
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHEEECCCCEEEE
WDNIKSAFKKKQPAKG
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]