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The map label for this gene is slyA [C]

Identifier: 154245852

GI number: 154245852

Start: 2158248

End: 2158739

Strand: Reverse

Name: slyA [C]

Synonym: Xaut_1908

Alternate gene names: 154245852

Gene position: 2158739-2158248 (Counterclockwise)

Preceding gene: 154245855

Following gene: 154245851

Centisome position: 40.66

GC content: 69.31

Gene sequence:

>492_bases
ATGAAGGATCCGGTTCAGAAGACCATCGGCTACCGGCTGACCCATACTGCGCGGCTGCAAAAGGCGCTGTCCGCCCGGCT
GCTGGCGACGCTGGGCCTGTTTCCGGGTCAGGAAGCGGTGCTGAAGCTGCTGTGCGAACAGGACGGCCGCACCATGGGCG
ACCTCGCCGGCGCCCTGCGGGTGCGCCCGCCCACCGCGTCCAAGACCATCGCCCGCCTCACCACCCAGGGCCTGGTGGAG
CGCCGCACCACCGATGGCGACGGCCGGTTGGTGCGGGTCTTCCTCAGCGAAGCCGGCCGCGAGCGCGGCGCCTCCATCGA
CAGCGTGTGGGAGCAGCTCGAGGGCGAGATGGTGGCCGGGCTCGACAACAAGGAAAAGAAGCGCCTGCGCAAGCTCTTGC
GCAAGGTGGAGAAGAACCTCGCCCACCGCCTCGGCACCGACGGCGGCGTCGACGACGAGCCGGACCTCGGCGAGGACGAC
GACGACAATTGA

Upstream 100 bases:

>100_bases
CCCGCCGCAGGGACGGCCGGAGCATCCTGTCGCCTCACGCCGGAAGCGCAGGGGCACGCGCACCGGACTGGTGTTCAGGG
TCGGCGGGTGGGGGGAGAAG

Downstream 100 bases:

>100_bases
GGGCCCTGCCCCGCAGGCCGTTTTCGGGGGAATTGCGGGACCGGCAGGGACGCCGCGTGTCTCGGCCCGGAAGCCTGTGC
CCCTCCGCGCTTCGGCGACT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator TrmB; Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKDPVQKTIGYRLTHTARLQKALSARLLATLGLFPGQEAVLKLLCEQDGRTMGDLAGALRVRPPTASKTIARLTTQGLVE
RRTTDGDGRLVRVFLSEAGRERGASIDSVWEQLEGEMVAGLDNKEKKRLRKLLRKVEKNLAHRLGTDGGVDDEPDLGEDD
DDN

Sequences:

>Translated_163_residues
MKDPVQKTIGYRLTHTARLQKALSARLLATLGLFPGQEAVLKLLCEQDGRTMGDLAGALRVRPPTASKTIARLTTQGLVE
RRTTDGDGRLVRVFLSEAGRERGASIDSVWEQLEGEMVAGLDNKEKKRLRKLLRKVEKNLAHRLGTDGGVDDEPDLGEDD
DDN
>Mature_163_residues
MKDPVQKTIGYRLTHTARLQKALSARLLATLGLFPGQEAVLKLLCEQDGRTMGDLAGALRVRPPTASKTIARLTTQGLVE
RRTTDGDGRLVRVFLSEAGRERGASIDSVWEQLEGEMVAGLDNKEKKRLRKLLRKVEKNLAHRLGTDGGVDDEPDLGEDD
DDN

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17960; Mature: 17960

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDPVQKTIGYRLTHTARLQKALSARLLATLGLFPGQEAVLKLLCEQDGRTMGDLAGALR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHC
VRPPTASKTIARLTTQGLVERRTTDGDGRLVRVFLSEAGRERGASIDSVWEQLEGEMVAG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCC
LDNKEKKRLRKLLRKVEKNLAHRLGTDGGVDDEPDLGEDDDDN
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKDPVQKTIGYRLTHTARLQKALSARLLATLGLFPGQEAVLKLLCEQDGRTMGDLAGALR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHC
VRPPTASKTIARLTTQGLVERRTTDGDGRLVRVFLSEAGRERGASIDSVWEQLEGEMVAG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCC
LDNKEKKRLRKLLRKVEKNLAHRLGTDGGVDDEPDLGEDDDDN
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA