| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245826
Identifier: 154245826
GI number: 154245826
Start: 2120568
End: 2123168
Strand: Reverse
Name: 154245826
Synonym: Xaut_1882
Alternate gene names: NA
Gene position: 2123168-2120568 (Counterclockwise)
Preceding gene: 154245827
Following gene: 154245819
Centisome position: 39.99
GC content: 72.74
Gene sequence:
>2601_bases GTGAGCGCACCTCGCGACGGAAAGCTCCCGCGCACGCCGGAAGGTGACGCGCGCTTCCTTCTGGCCCGCGCCGTCAGCCG CGCTCGCCTTGCCCTGTTCTGGGAACGCGCCTGGCCGGGCCTCGCGCGCGTGGGCATCGTGATCAGCGCCTTCCTCGCCC TGTCCTTCGCCGGCCTGTGGCTGTCAGTTCCGGTGGCGGTGCGCATCGCCGGTGTCGTCGCCTTCGCCATCCTGCTGGTG CTCGCCGCCCGCCCGCTCCTGACCCTGCGCTGGCCCAGCGAGGAGGACGGCGTCGCCCGCCTCGACCGCAGGAGCGCGCT GGCCCACCGGCCCGCCACCGCCATTTCCGACAGTCTCGCCACCAAGCCCGACGATCCCGTCGGCGCCGCCTTGTGGCGCG CCCATCTCGCCCGGGCGCTGGCCGCCGCCCGCACCCTGCGCGCCGGCCCGCCGGAACCCGGCCTTGCCCGGCTCGATCCC CGCGCGGTGCGGGCGCTGGCAGTGCTGGGCCTCTTCGCGACCTTCTTCATGGCGCCCGGCGCGCACCTGTCGCGCATCGG CGCCGCCTTCGACTGGAAGGCCGTGATCCCGCCCACGCCCTATCGCCTGGATGCCTGGGTCGATCCGCCCGGCTATACCG GCCGCCCGCCCGTGGTGCTGCCGGGCCTGCGCTCGGATGATCCCTCATCCCTGAACGCCGCGGCGCTGCAGGTGCCCACG GGCAGCGTGCTGGTGGTGCGCGGCGCCGGCATCGATGCCGCCTCCCTCAAGCTGGAAGGCGGCGTCTCGGAAGTGAAGCC CGAGGGCGATGCCCCCGCCGCCAGCGGCGAGCGGCGCTATGTGATCAAGACCGATGCGGACGTGACCTTCCTCGGTCCCG ACCAGCGCCGCCTCATGTGGCATTTCAAGGCATTGCCGGACCTCGCCCCCTCCATAGCCTTCGCCAAGGACCCTCAGGCC GGGCCGCGCAACGCCCTCGTGCTGGCCTACCGCATGGAGGACGACTACGGGGTGAAAGAGGCCGAAGCGGTATTCACCCC GCTGCCGCCCGAGCCGCCCTTGTTCCCGCGGCCCGGCGCGACACCTCCCAAGCTGGCGCAGCCGCTGGTGCCGGCGCCCG ACTTCAAGCTGTCCCTGCCCGCGGGCGGCAAGAGCGGCGCGGCGCAGACCTCCAAGGACCTCATCGCCCATCCCTGGGCC GGCGCCCGGGTGAGCGTGACCCTCAAGGCCCGCGACGAGGCGGGCAACGAAGGGGTGAGCGAGACCAAGACCGTGCGCCT GCCCGCGCGCAGCTTCTCCAAGCCGCTCGCCCGCGCCCTCATCGACGAGCGGCGGCGCCTTGCCTTCGATCCCGCCAACC GGCGGCGGCTGGTGGCGGTGCTCAATGCCCTCACCACCGCCCCCGAGCAGTTCACCCCGGCGGCAGGCGAATATCTCGGC CTCACCACCGCCCTCGCCCGGGCCAAGACCGCCCGCAACGACGACGATCTGCGCGCGCTGGTGGACTATCTGTGGGAAGT GGCGGTGCTGATCGAGGACGGCACCCTCTCCGAGGCCGAGCGCGAGCTGAAAGCCGCGCAGGAGGCCCTGCGCGAGGCGC TGGAGCGTGGCGCCAGCGAGGAGGAGATCAAGCGCCTCACCCAGGACCTGCGCGCCGCCATGGACAAGATGATGCGCCAG CTCGCCGAGCAGGCGCAGCGCGACGGCAACACCGATGCGCGCCCGCTCGATCCCAACACCCGTATCGTGCGCCCGCAGGA TCTCCAGCGCATGCTGGACCGCATCGAGAATCTCGCCCGCTCCGGCAATCGCGACGCGGCCAAGGCCCTGCTCGACGAGA TGCAGGCCATGATGGAGAACATGAAGCCCGGCGGCCGCCAGCAGGCCGGGCGCCAGAACCAGCAGCAGAACGAGCTGGGC AAGATGATCCAGGAGCAGCAGCGCCTGCGCGACCGCACCTGGCGCCAGAACCGGCAGGGCCAGCAGAACGGACAGCAGGG GCAACAGGGACAGCGCGGCCAGCAGGGGCAGCAAGGTCAGCAGGGGGAGAACGACTTCGGCGACCTCCAGCAGAACCAGC AGGAGCTGCGCCGCCGCCTCGGCCGCATGCTGGACGAGATGCGCCGCATGCAGCAGAGCCAGCAAGGACAGCAGGGCGGC CCCGGCCAGCAGGGCCAGAACGGCGAAGGCAACGAGGCCATGGACCGGGCCGGCGATGCTTTGGGCCGCGCGGGCGACGC CATGCGCGAGGCCGAGGAGGCTCTGGGCCGTGGCGAAGGCCAGGGCGCCCTCGACGCCGAGGGCCGGGCGCTCCAGGCCC TGCGCCAGGGCGCGCAGGCCATGGCCGAGGGCCAGCGTGGCAACCAGGACGGCCAGGGTCCCGGCGGCCCCGGCGAGGAA GCCGCCCAGCGCACCGACCCCATGGGCCGGCCGCTACGCAGCCAGGATTATGGCGACGACTTCTCGGTGAAGGTGCCCGA CGAGGTGGACGCCCAGCGCGCCCGCCGCGTGCTGGAGGAACTGCGCCGGCGCCTTGAGGAGCCGACCCGTCCGCAGCTCG AACTCGACTATCTCGATCGCCTGCTGCGCGGGCTGAACTGA
Upstream 100 bases:
>100_bases AAGGGCGTGCGCTGGCCCGCTCCTTGCGCCATGCTAGGCTGCTTTTAAGCTGGCTTTGCGTGTGCCGCGTCCGGCCGCCG GCGGGAAGAAGGGAGAGAGT
Downstream 100 bases:
>100_bases GGCTGCTGGGGCTGGCCGGCGCGGCCGGGCAGGAGTTTCGTCCGGCGTCGCAAGCGGTTCGGCCATGATGTCGGCCATGA TGGTCGCAACAAGCCCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 866; Mature: 865
Protein sequence:
>866_residues MSAPRDGKLPRTPEGDARFLLARAVSRARLALFWERAWPGLARVGIVISAFLALSFAGLWLSVPVAVRIAGVVAFAILLV LAARPLLTLRWPSEEDGVARLDRRSALAHRPATAISDSLATKPDDPVGAALWRAHLARALAAARTLRAGPPEPGLARLDP RAVRALAVLGLFATFFMAPGAHLSRIGAAFDWKAVIPPTPYRLDAWVDPPGYTGRPPVVLPGLRSDDPSSLNAAALQVPT GSVLVVRGAGIDAASLKLEGGVSEVKPEGDAPAASGERRYVIKTDADVTFLGPDQRRLMWHFKALPDLAPSIAFAKDPQA GPRNALVLAYRMEDDYGVKEAEAVFTPLPPEPPLFPRPGATPPKLAQPLVPAPDFKLSLPAGGKSGAAQTSKDLIAHPWA GARVSVTLKARDEAGNEGVSETKTVRLPARSFSKPLARALIDERRRLAFDPANRRRLVAVLNALTTAPEQFTPAAGEYLG LTTALARAKTARNDDDLRALVDYLWEVAVLIEDGTLSEAERELKAAQEALREALERGASEEEIKRLTQDLRAAMDKMMRQ LAEQAQRDGNTDARPLDPNTRIVRPQDLQRMLDRIENLARSGNRDAAKALLDEMQAMMENMKPGGRQQAGRQNQQQNELG KMIQEQQRLRDRTWRQNRQGQQNGQQGQQGQRGQQGQQGQQGENDFGDLQQNQQELRRRLGRMLDEMRRMQQSQQGQQGG PGQQGQNGEGNEAMDRAGDALGRAGDAMREAEEALGRGEGQGALDAEGRALQALRQGAQAMAEGQRGNQDGQGPGGPGEE AAQRTDPMGRPLRSQDYGDDFSVKVPDEVDAQRARRVLEELRRRLEEPTRPQLELDYLDRLLRGLN
Sequences:
>Translated_866_residues MSAPRDGKLPRTPEGDARFLLARAVSRARLALFWERAWPGLARVGIVISAFLALSFAGLWLSVPVAVRIAGVVAFAILLV LAARPLLTLRWPSEEDGVARLDRRSALAHRPATAISDSLATKPDDPVGAALWRAHLARALAAARTLRAGPPEPGLARLDP RAVRALAVLGLFATFFMAPGAHLSRIGAAFDWKAVIPPTPYRLDAWVDPPGYTGRPPVVLPGLRSDDPSSLNAAALQVPT GSVLVVRGAGIDAASLKLEGGVSEVKPEGDAPAASGERRYVIKTDADVTFLGPDQRRLMWHFKALPDLAPSIAFAKDPQA GPRNALVLAYRMEDDYGVKEAEAVFTPLPPEPPLFPRPGATPPKLAQPLVPAPDFKLSLPAGGKSGAAQTSKDLIAHPWA GARVSVTLKARDEAGNEGVSETKTVRLPARSFSKPLARALIDERRRLAFDPANRRRLVAVLNALTTAPEQFTPAAGEYLG LTTALARAKTARNDDDLRALVDYLWEVAVLIEDGTLSEAERELKAAQEALREALERGASEEEIKRLTQDLRAAMDKMMRQ LAEQAQRDGNTDARPLDPNTRIVRPQDLQRMLDRIENLARSGNRDAAKALLDEMQAMMENMKPGGRQQAGRQNQQQNELG KMIQEQQRLRDRTWRQNRQGQQNGQQGQQGQRGQQGQQGQQGENDFGDLQQNQQELRRRLGRMLDEMRRMQQSQQGQQGG PGQQGQNGEGNEAMDRAGDALGRAGDAMREAEEALGRGEGQGALDAEGRALQALRQGAQAMAEGQRGNQDGQGPGGPGEE AAQRTDPMGRPLRSQDYGDDFSVKVPDEVDAQRARRVLEELRRRLEEPTRPQLELDYLDRLLRGLN >Mature_865_residues SAPRDGKLPRTPEGDARFLLARAVSRARLALFWERAWPGLARVGIVISAFLALSFAGLWLSVPVAVRIAGVVAFAILLVL AARPLLTLRWPSEEDGVARLDRRSALAHRPATAISDSLATKPDDPVGAALWRAHLARALAAARTLRAGPPEPGLARLDPR AVRALAVLGLFATFFMAPGAHLSRIGAAFDWKAVIPPTPYRLDAWVDPPGYTGRPPVVLPGLRSDDPSSLNAAALQVPTG SVLVVRGAGIDAASLKLEGGVSEVKPEGDAPAASGERRYVIKTDADVTFLGPDQRRLMWHFKALPDLAPSIAFAKDPQAG PRNALVLAYRMEDDYGVKEAEAVFTPLPPEPPLFPRPGATPPKLAQPLVPAPDFKLSLPAGGKSGAAQTSKDLIAHPWAG ARVSVTLKARDEAGNEGVSETKTVRLPARSFSKPLARALIDERRRLAFDPANRRRLVAVLNALTTAPEQFTPAAGEYLGL TTALARAKTARNDDDLRALVDYLWEVAVLIEDGTLSEAERELKAAQEALREALERGASEEEIKRLTQDLRAAMDKMMRQL AEQAQRDGNTDARPLDPNTRIVRPQDLQRMLDRIENLARSGNRDAAKALLDEMQAMMENMKPGGRQQAGRQNQQQNELGK MIQEQQRLRDRTWRQNRQGQQNGQQGQQGQRGQQGQQGQQGENDFGDLQQNQQELRRRLGRMLDEMRRMQQSQQGQQGGP GQQGQNGEGNEAMDRAGDALGRAGDAMREAEEALGRGEGQGALDAEGRALQALRQGAQAMAEGQRGNQDGQGPGGPGEEA AQRTDPMGRPLRSQDYGDDFSVKVPDEVDAQRARRVLEELRRRLEEPTRPQLELDYLDRLLRGLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94381; Mature: 94250
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPRDGKLPRTPEGDARFLLARAVSRARLALFWERAWPGLARVGIVISAFLALSFAGLW CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LSVPVAVRIAGVVAFAILLVLAARPLLTLRWPSEEDGVARLDRRSALAHRPATAISDSLA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHC TKPDDPVGAALWRAHLARALAAARTLRAGPPEPGLARLDPRAVRALAVLGLFATFFMAPG CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC AHLSRIGAAFDWKAVIPPTPYRLDAWVDPPGYTGRPPVVLPGLRSDDPSSLNAAALQVPT HHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEECCC GSVLVVRGAGIDAASLKLEGGVSEVKPEGDAPAASGERRYVIKTDADVTFLGPDQRRLMW CCEEEEECCCCCHHHEEECCCHHHCCCCCCCCCCCCCCEEEEEECCCEEEECCCHHHHHH HFKALPDLAPSIAFAKDPQAGPRNALVLAYRMEDDYGVKEAEAVFTPLPPEPPLFPRPGA HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCC TPPKLAQPLVPAPDFKLSLPAGGKSGAAQTSKDLIAHPWAGARVSVTLKARDEAGNEGVS CCHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC ETKTVRLPARSFSKPLARALIDERRRLAFDPANRRRLVAVLNALTTAPEQFTPAAGEYLG CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCCCHHHHH LTTALARAKTARNDDDLRALVDYLWEVAVLIEDGTLSEAERELKAAQEALREALERGASE HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH EEIKRLTQDLRAAMDKMMRQLAEQAQRDGNTDARPLDPNTRIVRPQDLQRMLDRIENLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHH SGNRDAAKALLDEMQAMMENMKPGGRQQAGRQNQQQNELGKMIQEQQRLRDRTWRQNRQG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QQNGQQGQQGQRGQQGQQGQQGENDFGDLQQNQQELRRRLGRMLDEMRRMQQSQQGQQGG HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PGQQGQNGEGNEAMDRAGDALGRAGDAMREAEEALGRGEGQGALDAEGRALQALRQGAQA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH MAEGQRGNQDGQGPGGPGEEAAQRTDPMGRPLRSQDYGDDFSVKVPDEVDAQRARRVLEE HHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHH LRRRLEEPTRPQLELDYLDRLLRGLN HHHHHCCCCCCCEEHHHHHHHHHCCC >Mature Secondary Structure SAPRDGKLPRTPEGDARFLLARAVSRARLALFWERAWPGLARVGIVISAFLALSFAGLW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LSVPVAVRIAGVVAFAILLVLAARPLLTLRWPSEEDGVARLDRRSALAHRPATAISDSLA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHC TKPDDPVGAALWRAHLARALAAARTLRAGPPEPGLARLDPRAVRALAVLGLFATFFMAPG CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC AHLSRIGAAFDWKAVIPPTPYRLDAWVDPPGYTGRPPVVLPGLRSDDPSSLNAAALQVPT HHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEECCC GSVLVVRGAGIDAASLKLEGGVSEVKPEGDAPAASGERRYVIKTDADVTFLGPDQRRLMW CCEEEEECCCCCHHHEEECCCHHHCCCCCCCCCCCCCCEEEEEECCCEEEECCCHHHHHH HFKALPDLAPSIAFAKDPQAGPRNALVLAYRMEDDYGVKEAEAVFTPLPPEPPLFPRPGA HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCC TPPKLAQPLVPAPDFKLSLPAGGKSGAAQTSKDLIAHPWAGARVSVTLKARDEAGNEGVS CCHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC ETKTVRLPARSFSKPLARALIDERRRLAFDPANRRRLVAVLNALTTAPEQFTPAAGEYLG CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCCCHHHHH LTTALARAKTARNDDDLRALVDYLWEVAVLIEDGTLSEAERELKAAQEALREALERGASE HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH EEIKRLTQDLRAAMDKMMRQLAEQAQRDGNTDARPLDPNTRIVRPQDLQRMLDRIENLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHH SGNRDAAKALLDEMQAMMENMKPGGRQQAGRQNQQQNELGKMIQEQQRLRDRTWRQNRQG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QQNGQQGQQGQRGQQGQQGQQGENDFGDLQQNQQELRRRLGRMLDEMRRMQQSQQGQQGG HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PGQQGQNGEGNEAMDRAGDALGRAGDAMREAEEALGRGEGQGALDAEGRALQALRQGAQA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH MAEGQRGNQDGQGPGGPGEEAAQRTDPMGRPLRSQDYGDDFSVKVPDEVDAQRARRVLEE HHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHH LRRRLEEPTRPQLELDYLDRLLRGLN HHHHHCCCCCCCEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA