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The map label for this gene is kstR2 [H]

Identifier: 154245802

GI number: 154245802

Start: 2092002

End: 2092706

Strand: Reverse

Name: kstR2 [H]

Synonym: Xaut_1858

Alternate gene names: 154245802

Gene position: 2092706-2092002 (Counterclockwise)

Preceding gene: 154245803

Following gene: 154245801

Centisome position: 39.42

GC content: 68.51

Gene sequence:

>705_bases
ATGGCGCGCACCATCGGTTCCAACGGCGCCCGTACCGCCGAAGCCATCCGCCAGGCGGGCGTCAAGCTCATCTACAAGCA
CGGCTACGAGGCCATGAGCCTGCGCCAGCTCGCCGCCGAGGTGGGGCTGCAGTCCGGCTCGCTCTACAAATATTTTGAGA
ACAAGCAGAACCTGCTGTTCGACATCGTGCGCGACCACATGGAGGACCTGCTCGGCAAGGCCGAGGCGGACCTGGAGGGC
ATCACCGACCCGCTGGCGCGGCTGAAGACCTTCTCCGCCTTTCACCTGCGCTATCACATGACGCGCATGGCCCATGTCTT
CATCGCCAACATGGAGATCCGCAGCCTGGAGGACGAGCACCGCGCCGTGGTGGTCGCCCTGCGCCGGCGCTACGAGGGCC
TGCTGGAGGAGATCCTGCGGCAGGGCGCGCAGGAAGGCGTGTTCCAGGTGAGTGAGCCCAAGGTCGCCACCTACGCCATC
ATCTCCATGCTCACCGGCATCTGCATGTGGTACCGACCCGGCGGGCGCCTCTCCCAGGACGAACTGGTGGACATCTACAC
CGGTCTCGTGGTGGACGGCGCCACCGGGCCCGGCCCGGCAACCGCCGCCCGCGCCAAACCGCTTGAGGCCGCCGCCGCCC
AGCCGCGCGACAGCGGCGCGCGCGCCAAACCCCGCGTTGCCCGGCCCAAGACGGCGCGCGCGTAA

Upstream 100 bases:

>100_bases
GCGCGCGTCAGACTAAAGTCGCCCCTCCGGCCGGATCATCGATCCGCATGTCCCACCCGCTCCCGACCCCGTGGCCGGGC
GCACAGAGTTCCGGAAGGCC

Downstream 100 bases:

>100_bases
AAGCCCCCTTCCCGCCGCCATGGCCCTTGCGCGGCCCAGAAAAAAACGTACGATCGTTTCCAAGCCGGCAATGACCGGCA
CCGGAGGATGACGCGCCCAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MARTIGSNGARTAEAIRQAGVKLIYKHGYEAMSLRQLAAEVGLQSGSLYKYFENKQNLLFDIVRDHMEDLLGKAEADLEG
ITDPLARLKTFSAFHLRYHMTRMAHVFIANMEIRSLEDEHRAVVVALRRRYEGLLEEILRQGAQEGVFQVSEPKVATYAI
ISMLTGICMWYRPGGRLSQDELVDIYTGLVVDGATGPGPATAARAKPLEAAAAQPRDSGARAKPRVARPKTARA

Sequences:

>Translated_234_residues
MARTIGSNGARTAEAIRQAGVKLIYKHGYEAMSLRQLAAEVGLQSGSLYKYFENKQNLLFDIVRDHMEDLLGKAEADLEG
ITDPLARLKTFSAFHLRYHMTRMAHVFIANMEIRSLEDEHRAVVVALRRRYEGLLEEILRQGAQEGVFQVSEPKVATYAI
ISMLTGICMWYRPGGRLSQDELVDIYTGLVVDGATGPGPATAARAKPLEAAAAQPRDSGARAKPRVARPKTARA
>Mature_233_residues
ARTIGSNGARTAEAIRQAGVKLIYKHGYEAMSLRQLAAEVGLQSGSLYKYFENKQNLLFDIVRDHMEDLLGKAEADLEGI
TDPLARLKTFSAFHLRYHMTRMAHVFIANMEIRSLEDEHRAVVVALRRRYEGLLEEILRQGAQEGVFQVSEPKVATYAII
SMLTGICMWYRPGGRLSQDELVDIYTGLVVDGATGPGPATAARAKPLEAAAAQPRDSGARAKPRVARPKTARA

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 25840; Mature: 25709

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTIGSNGARTAEAIRQAGVKLIYKHGYEAMSLRQLAAEVGLQSGSLYKYFENKQNLLF
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHH
DIVRDHMEDLLGKAEADLEGITDPLARLKTFSAFHLRYHMTRMAHVFIANMEIRSLEDEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHH
RAVVVALRRRYEGLLEEILRQGAQEGVFQVSEPKVATYAIISMLTGICMWYRPGGRLSQD
HHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH
ELVDIYTGLVVDGATGPGPATAARAKPLEAAAAQPRDSGARAKPRVARPKTARA
HHHHHHHHHEEECCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARTIGSNGARTAEAIRQAGVKLIYKHGYEAMSLRQLAAEVGLQSGSLYKYFENKQNLLF
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHH
DIVRDHMEDLLGKAEADLEGITDPLARLKTFSAFHLRYHMTRMAHVFIANMEIRSLEDEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHH
RAVVVALRRRYEGLLEEILRQGAQEGVFQVSEPKVATYAIISMLTGICMWYRPGGRLSQD
HHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH
ELVDIYTGLVVDGATGPGPATAARAKPLEAAAAQPRDSGARAKPRVARPKTARA
HHHHHHHHHEEECCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA