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The map label for this gene is nagD [C]

Identifier: 154245788

GI number: 154245788

Start: 2074450

End: 2075352

Strand: Reverse

Name: nagD [C]

Synonym: Xaut_1844

Alternate gene names: 154245788

Gene position: 2075352-2074450 (Counterclockwise)

Preceding gene: 154245789

Following gene: 154245787

Centisome position: 39.09

GC content: 68.22

Gene sequence:

>903_bases
ATGGCCGAGCGCTCCGACAGCACGCACAGGGCACACCCCCACGCACCGCCCATGGTGTCCGGCCTGTCCGCCTATGCGGG
CCAGTACGATCTCATTCTCTGTGACGTGTGGGGCGTGCTGCATAATGGCGTCGTCGCCTTCGAGAGTGCCCATGACGCCC
TGACCCGCGCCCGTGCCGGCGGGGCCAGCGTGATTCTCGTCTCCAACGCGCCGCGGCCCAACCGCTTCGTCATGGAGATG
CTGGACGGCTTCGGCGTGCCGCGCACCGCCTATGACGGCATCGTCACCTCCGGCGATGTCACCCGCGAGATGCTGGCCGC
CCGCAGCGGCGCACGCACCTATCACCTGGGCCCCGCGCGCGACCTGAGCCTGTTCGACGGGCTCGGCCTCACGCTGACCG
ACCTTGCCGATGCCGACCTCGTGGTGGTCACCGGCCTGTTCAACGACGACGTGGAAACCCCGGACGATTACGCGGACGCG
CTCAAGGCCATGAAGGCCCGCGACCTGCCGATGATCTGCGCCAATCCCGACCTGGTGGTGGAGCGGGGCGACCAACTCAT
CTTCTGCTCCGGCGCCATCGCCAAGGCCTATGAGGAGCTGGACGGCAAGGCCTTCTGGTGTGGCAAGCCGCACCGGCCCA
TCTACGACACCGCGTTCGCCCATGCCGAGGTGATCCGTGGCGCCGTCATCGACCGCACCCGCGTGCTCGGCATCGGCGAT
GCCCTGCGCACCGACATCGCCGGGGCCAATGATGCCGGCTTCGACAGCCTGTTCATCTCCGGCGGCATCCATGCCCAGGA
GCTGAAGTCGGTCGACGGCGCCATCCCGGACACCGAAAGCCTCGCCGATCTGTTCACCGGCCATGCCCATCCGCGAGGCG
TCATGCCTCGCCTCGCTTGGTAG

Upstream 100 bases:

>100_bases
TCCTGCCCGAGACACTCCCCACGCGCCGCCCTTGTCGTCCGCCTTTCGTCGTGGCACTTGTGCGCCGCACAAGAGAAAGA
CGACCCGAGAAAGACGACTT

Downstream 100 bases:

>100_bases
GGCGCCCTTGACGCCTCCCGGCGCCTAGAGCACGTATCACCGTCGCCGCTGGCGCGCCGGGTGCCGCCCGGTTTCGCCGA
GTGACGAAAAGACAAGGCAA

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MAERSDSTHRAHPHAPPMVSGLSAYAGQYDLILCDVWGVLHNGVVAFESAHDALTRARAGGASVILVSNAPRPNRFVMEM
LDGFGVPRTAYDGIVTSGDVTREMLAARSGARTYHLGPARDLSLFDGLGLTLTDLADADLVVVTGLFNDDVETPDDYADA
LKAMKARDLPMICANPDLVVERGDQLIFCSGAIAKAYEELDGKAFWCGKPHRPIYDTAFAHAEVIRGAVIDRTRVLGIGD
ALRTDIAGANDAGFDSLFISGGIHAQELKSVDGAIPDTESLADLFTGHAHPRGVMPRLAW

Sequences:

>Translated_300_residues
MAERSDSTHRAHPHAPPMVSGLSAYAGQYDLILCDVWGVLHNGVVAFESAHDALTRARAGGASVILVSNAPRPNRFVMEM
LDGFGVPRTAYDGIVTSGDVTREMLAARSGARTYHLGPARDLSLFDGLGLTLTDLADADLVVVTGLFNDDVETPDDYADA
LKAMKARDLPMICANPDLVVERGDQLIFCSGAIAKAYEELDGKAFWCGKPHRPIYDTAFAHAEVIRGAVIDRTRVLGIGD
ALRTDIAGANDAGFDSLFISGGIHAQELKSVDGAIPDTESLADLFTGHAHPRGVMPRLAW
>Mature_299_residues
AERSDSTHRAHPHAPPMVSGLSAYAGQYDLILCDVWGVLHNGVVAFESAHDALTRARAGGASVILVSNAPRPNRFVMEML
DGFGVPRTAYDGIVTSGDVTREMLAARSGARTYHLGPARDLSLFDGLGLTLTDLADADLVVVTGLFNDDVETPDDYADAL
KAMKARDLPMICANPDLVVERGDQLIFCSGAIAKAYEELDGKAFWCGKPHRPIYDTAFAHAEVIRGAVIDRTRVLGIGDA
LRTDIAGANDAGFDSLFISGGIHAQELKSVDGAIPDTESLADLFTGHAHPRGVMPRLAW

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 32039; Mature: 31907

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERSDSTHRAHPHAPPMVSGLSAYAGQYDLILCDVWGVLHNGVVAFESAHDALTRARAG
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHCCEEEEHHHHHHHHHHHCC
GASVILVSNAPRPNRFVMEMLDGFGVPRTAYDGIVTSGDVTREMLAARSGARTYHLGPAR
CCEEEEEECCCCCHHHHHHHHHCCCCCCHHHCCEEECCHHHHHHHHHHCCCCEEECCCCC
DLSLFDGLGLTLTDLADADLVVVTGLFNDDVETPDDYADALKAMKARDLPMICANPDLVV
CCHHHCCCCCEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEE
ERGDQLIFCSGAIAKAYEELDGKAFWCGKPHRPIYDTAFAHAEVIRGAVIDRTRVLGIGD
ECCCEEEEECCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCH
ALRTDIAGANDAGFDSLFISGGIHAQELKSVDGAIPDTESLADLFTGHAHPRGVMPRLAW
HHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AERSDSTHRAHPHAPPMVSGLSAYAGQYDLILCDVWGVLHNGVVAFESAHDALTRARAG
CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHCCEEEEHHHHHHHHHHHCC
GASVILVSNAPRPNRFVMEMLDGFGVPRTAYDGIVTSGDVTREMLAARSGARTYHLGPAR
CCEEEEEECCCCCHHHHHHHHHCCCCCCHHHCCEEECCHHHHHHHHHHCCCCEEECCCCC
DLSLFDGLGLTLTDLADADLVVVTGLFNDDVETPDDYADALKAMKARDLPMICANPDLVV
CCHHHCCCCCEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEE
ERGDQLIFCSGAIAKAYEELDGKAFWCGKPHRPIYDTAFAHAEVIRGAVIDRTRVLGIGD
ECCCEEEEECCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCH
ALRTDIAGANDAGFDSLFISGGIHAQELKSVDGAIPDTESLADLFTGHAHPRGVMPRLAW
HHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]