| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is fur [H]
Identifier: 154245764
GI number: 154245764
Start: 2048113
End: 2048547
Strand: Reverse
Name: fur [H]
Synonym: Xaut_1820
Alternate gene names: 154245764
Gene position: 2048547-2048113 (Counterclockwise)
Preceding gene: 154245765
Following gene: 154245763
Centisome position: 38.59
GC content: 62.76
Gene sequence:
>435_bases TTGAGCGGCAGCAACATGAGCGTCATCGAGGAAGCGTGCCTTGCCAAGGGCATGAGGATGACGGAGCAGCGCCGGATCAT CGCCCGCGTGCTTTCCGGCGCGCAGGACCATCCTGACGTGGAGGAACTGCACCGCCGCGCCGTCGCCATCGACGACAACA TCTCCATCTCCACGGTCTATCGCACGGTGAAGATGCTGGAGGATGCCGGCATCATCGAGCGCCATGATTTCGGCGACGGT CGCGCCCGTTACGAGCAGATGCCGGACGAGCACCATGATCATCTCATCGACCTGAGATCCGGCCACGTGATCGAATTCCG CTCCGAGGAGATCGAGGCGCTGCAGGAGGCCATCGCCCGCCGCCTCGGCTACAAGCTGCGCGGCCATCGCCTCGAACTCT ATGCTGTGCCCCTCGAAGAGGATGAGAAATCGTGA
Upstream 100 bases:
>100_bases CTGCTGCTGCGGCGGGATTTTTGAGGGACGTCCGCCCCCTTGCAGGGATCGGGCCGGAGGGCGATAAGGCGTCTGTCCCG TTGGATCGCGGAGGTCCCGC
Downstream 100 bases:
>100_bases CGCCGGCCCGCGAGCCGGCGGGCGAGGCCACGCGCCTGCCCCTTGAATTCGGCGGCCTTGAGCCCCTGGGGCCAGAGCAG CCGGCGGTCTCGCGGTTTCT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSGSNMSVIEEACLAKGMRMTEQRRIIARVLSGAQDHPDVEELHRRAVAIDDNISISTVYRTVKMLEDAGIIERHDFGDG RARYEQMPDEHHDHLIDLRSGHVIEFRSEEIEALQEAIARRLGYKLRGHRLELYAVPLEEDEKS
Sequences:
>Translated_144_residues MSGSNMSVIEEACLAKGMRMTEQRRIIARVLSGAQDHPDVEELHRRAVAIDDNISISTVYRTVKMLEDAGIIERHDFGDG RARYEQMPDEHHDHLIDLRSGHVIEFRSEEIEALQEAIARRLGYKLRGHRLELYAVPLEEDEKS >Mature_143_residues SGSNMSVIEEACLAKGMRMTEQRRIIARVLSGAQDHPDVEELHRRAVAIDDNISISTVYRTVKMLEDAGIIERHDFGDGR ARYEQMPDEHHDHLIDLRSGHVIEFRSEEIEALQEAIARRLGYKLRGHRLELYAVPLEEDEKS
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=126, Percent_Identity=39.6825396825397, Blast_Score=91, Evalue=4e-20,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16549; Mature: 16418
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSNMSVIEEACLAKGMRMTEQRRIIARVLSGAQDHPDVEELHRRAVAIDDNISISTVY CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHH RTVKMLEDAGIIERHDFGDGRARYEQMPDEHHDHLIDLRSGHVIEFRSEEIEALQEAIAR HHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHEEECCCCCEEEECHHHHHHHHHHHHH RLGYKLRGHRLELYAVPLEEDEKS HHCCHHCCCEEEEEECCCCCCCCC >Mature Secondary Structure SGSNMSVIEEACLAKGMRMTEQRRIIARVLSGAQDHPDVEELHRRAVAIDDNISISTVY CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHH RTVKMLEDAGIIERHDFGDGRARYEQMPDEHHDHLIDLRSGHVIEFRSEEIEALQEAIAR HHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHEEECCCCCEEEECHHHHHHHHHHHHH RLGYKLRGHRLELYAVPLEEDEKS HHCCHHCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9835040 [H]