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The map label for this gene is pqqE [H]

Identifier: 154245743

GI number: 154245743

Start: 2027919

End: 2029094

Strand: Reverse

Name: pqqE [H]

Synonym: Xaut_1799

Alternate gene names: 154245743

Gene position: 2029094-2027919 (Counterclockwise)

Preceding gene: 154245744

Following gene: 154245742

Centisome position: 38.22

GC content: 70.07

Gene sequence:

>1176_bases
ATGACCAATGCCACAGCCGAGCTGAATCTGGAGACGGCGCCCCGCCCGGCGGCGGTGCATCCGGTCGGCCATCCCATCGG
CATCCTCGCCGAGTTGACCCATCGCTGTCCCCTGCGCTGTCCCTATTGCTCCAATCCGCTGGAGCTGGAGCGCCGCGAGG
CGGAGCTGGACACAGCCACCTGGAAGCGCGTGCTGAGCGAGGCGGCGGCCCTCGGCGTGCTGCATGTCCACCTCTCCGGC
GGCGAGCCAACGGCGCGGGCGGACCTCGTCGAGCTGACGGCCCATTGCGCGGCGGAAGGGCTCTACACCAATCTCATCAC
CTCCGGCGTCGGCCGTGCCGGGGCCATGCTTCCCGCCTTGTCCGAGGCGGGGCTGGACCATGTGCAGCTCTCCTTCCAGG
GCGCCAAGGCCGAGACCACCGATCGGGTCGGTGGCTATGCGGGCGGCCATGCGGCCAAGCTCGCCTTCGCCGCGCAGGTG
ACCGACCTCGGTCTGCCGCTGACCGTGAACGCGGTGTTCCATCGCGCCAACATTCACGAGGTGGAGGACATGATCGAGCT
GGCCATCGCGCTGAAGGCGCGGCGGCTGGAGGTGGCGCACACGCAGTACTACGGCTGGGCCTATGCCAACCGCGCCGCGC
TGATGCCGGCGCGCCCCGACGTGGACCGCTCCGTCGCCATCGTGGAAGAGGCGCGCAAGCGGCTGGAAGGCGTGCTGGTC
ATCGATATGGTGATTCCGGACTATTACGCCCGCTATCCAAAGCCCTGTTCCGGCGGCTGGGGCCGGCGCACGCTGAATGT
GACGCCCACCGGGCGGGTGCTGCCCTGCCATGCGGCAGAGAGCATTCCGGGCCTCGAATTCTGGTCGGTGCGCGACCATG
CGCTGGGCGACATCTGGCGCGCCTCGCCGGCCTTCAACGCCTATCGCGGCACCGCCTGGATGCGCGAGCCCTGCCGCAGC
TGCGACCGGCGGGAGATGGATTTCGGCGGCTGCCGCTGCCAGGCCATGGCGCTGGCGGGCGACGCCAGCCTGACCGATCC
GGCCTGCTCCAAATCCCCGTTCCATGCCCGGGTGGAGGCGCTGGCCACCGCCGAGGCGGCGGGCATCGCCCCCGATTTCA
TCTACCGCACCATCGGCGGGATGCCGGCGGGACGGCGGGAAGGAGCAAAACCGTGA

Upstream 100 bases:

>100_bases
TGGATGCCTTGGCGCTGCGCTTCGATGAAAAGCGCGAGGTGATCGCCGACGACGTGCGCGACATGATCGGCGATCTCATT
GCGCGGCGGGTGATCGAACG

Downstream 100 bases:

>100_bases
GCGCCCGCAGGATCATCGGCCTTTGTCTCGTGCTCACCGCGGCGCTTTTCGCCGCCGGCTTCCTGGTGGAGCCGCTGCCC
GCCCGCGCCGCCGAGGCGCA

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTNATAELNLETAPRPAAVHPVGHPIGILAELTHRCPLRCPYCSNPLELERREAELDTATWKRVLSEAAALGVLHVHLSG
GEPTARADLVELTAHCAAEGLYTNLITSGVGRAGAMLPALSEAGLDHVQLSFQGAKAETTDRVGGYAGGHAAKLAFAAQV
TDLGLPLTVNAVFHRANIHEVEDMIELAIALKARRLEVAHTQYYGWAYANRAALMPARPDVDRSVAIVEEARKRLEGVLV
IDMVIPDYYARYPKPCSGGWGRRTLNVTPTGRVLPCHAAESIPGLEFWSVRDHALGDIWRASPAFNAYRGTAWMREPCRS
CDRREMDFGGCRCQAMALAGDASLTDPACSKSPFHARVEALATAEAAGIAPDFIYRTIGGMPAGRREGAKP

Sequences:

>Translated_391_residues
MTNATAELNLETAPRPAAVHPVGHPIGILAELTHRCPLRCPYCSNPLELERREAELDTATWKRVLSEAAALGVLHVHLSG
GEPTARADLVELTAHCAAEGLYTNLITSGVGRAGAMLPALSEAGLDHVQLSFQGAKAETTDRVGGYAGGHAAKLAFAAQV
TDLGLPLTVNAVFHRANIHEVEDMIELAIALKARRLEVAHTQYYGWAYANRAALMPARPDVDRSVAIVEEARKRLEGVLV
IDMVIPDYYARYPKPCSGGWGRRTLNVTPTGRVLPCHAAESIPGLEFWSVRDHALGDIWRASPAFNAYRGTAWMREPCRS
CDRREMDFGGCRCQAMALAGDASLTDPACSKSPFHARVEALATAEAAGIAPDFIYRTIGGMPAGRREGAKP
>Mature_390_residues
TNATAELNLETAPRPAAVHPVGHPIGILAELTHRCPLRCPYCSNPLELERREAELDTATWKRVLSEAAALGVLHVHLSGG
EPTARADLVELTAHCAAEGLYTNLITSGVGRAGAMLPALSEAGLDHVQLSFQGAKAETTDRVGGYAGGHAAKLAFAAQVT
DLGLPLTVNAVFHRANIHEVEDMIELAIALKARRLEVAHTQYYGWAYANRAALMPARPDVDRSVAIVEEARKRLEGVLVI
DMVIPDYYARYPKPCSGGWGRRTLNVTPTGRVLPCHAAESIPGLEFWSVRDHALGDIWRASPAFNAYRGTAWMREPCRSC
DRREMDFGGCRCQAMALAGDASLTDPACSKSPFHARVEALATAEAAGIAPDFIYRTIGGMPAGRREGAKP

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42102; Mature: 41971

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNATAELNLETAPRPAAVHPVGHPIGILAELTHRCPLRCPYCSNPLELERREAELDTAT
CCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
WKRVLSEAAALGVLHVHLSGGEPTARADLVELTAHCAAEGLYTNLITSGVGRAGAMLPAL
HHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SEAGLDHVQLSFQGAKAETTDRVGGYAGGHAAKLAFAAQVTDLGLPLTVNAVFHRANIHE
HHCCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCHHH
VEDMIELAIALKARRLEVAHTQYYGWAYANRAALMPARPDVDRSVAIVEEARKRLEGVLV
HHHHHHHHHHHHHHHHEEHHHEEECEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCEEE
IDMVIPDYYARYPKPCSGGWGRRTLNVTPTGRVLPCHAAESIPGLEFWSVRDHALGDIWR
EEECCCHHHHHCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCEEECCCHHHHHHHHH
ASPAFNAYRGTAWMREPCRSCDRREMDFGGCRCQAMALAGDASLTDPACSKSPFHARVEA
CCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHH
LATAEAAGIAPDFIYRTIGGMPAGRREGAKP
HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TNATAELNLETAPRPAAVHPVGHPIGILAELTHRCPLRCPYCSNPLELERREAELDTAT
CCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
WKRVLSEAAALGVLHVHLSGGEPTARADLVELTAHCAAEGLYTNLITSGVGRAGAMLPAL
HHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SEAGLDHVQLSFQGAKAETTDRVGGYAGGHAAKLAFAAQVTDLGLPLTVNAVFHRANIHE
HHCCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCHHH
VEDMIELAIALKARRLEVAHTQYYGWAYANRAALMPARPDVDRSVAIVEEARKRLEGVLV
HHHHHHHHHHHHHHHHEEHHHEEECEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCEEE
IDMVIPDYYARYPKPCSGGWGRRTLNVTPTGRVLPCHAAESIPGLEFWSVRDHALGDIWR
EEECCCHHHHHCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCEEECCCHHHHHHHHH
ASPAFNAYRGTAWMREPCRSCDRREMDFGGCRCQAMALAGDASLTDPACSKSPFHARVEA
CCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHH
LATAEAAGIAPDFIYRTIGGMPAGRREGAKP
HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA