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The map label for this gene is ssuC [H]

Identifier: 154245728

GI number: 154245728

Start: 2011310

End: 2012071

Strand: Reverse

Name: ssuC [H]

Synonym: Xaut_1784

Alternate gene names: 154245728

Gene position: 2012071-2011310 (Counterclockwise)

Preceding gene: 154245729

Following gene: 154245727

Centisome position: 37.9

GC content: 69.29

Gene sequence:

>762_bases
ATGAGGTTCCCCTGGTCCGGTGCCCTGGTGCGTGTCGGCTCGCTCACGGCTCTGCTGGCGCTGTGGCAGGCGGCGGCGAG
CCTGGCCCACAGCCGTGCCCTGCCCACCCCCGAGGCGGTGCTCGCCTTCCTGTCGAAGGAGGCGGCGTCGGGAGACCTGT
TTTCCAACCTTGCGGTGACGCTGGCGCGGGTGGCGGTGTCCTTCGTGGTGGCCATGGCGATCGGAACGGTGATCGGCGTT
GCCTTCGGCCGCATGCGGCGGCTCGACCGGGTGTTCGACACCTGGCTGGTGGTGCTGCTGAACACGCCGGCCCTGGTCAT
CACCGTGCTCTGCTACATCTGGCTCGGCCTCACCGAGACGGCGGCAGTGCTGGCGGTGGCGCTCAACAAGATCCCCACCG
TCGCCGTGCTGCTGCGGGAGGGCGCGCGGGCCCTGTCGCCGGAGCTGGACGAGATGGCCGGGGCCTTCCGCCTGTCCTTC
CTCGACCGCATGCGCCATGTGGTGCTGCCGCAGCTTGAGCCGCACCTTGCAGGGGCGGCGCGCTCCGGGCTCGCCCTGGT
GTGGAAGATCGTGCTGGTGGTGGAATTGCTGGGGCGGCCCAACGGGGTGGGCTATGCCATCTCCGTCTATTTCCAGCTGT
TCGATGTGGCCGCCGTGCTGGGCTATTCGCTGGCCTTCATGGCCGTCATGCTGGCCATCGAATATGGCGTGCTGCAACCC
TTCGAAGCCCACGCCCGGCGCTGGCGCCTTGAGGCCCGCTGA

Upstream 100 bases:

>100_bases
TGGGGCCGGCGGCCGCCTTGCCGCCCGGCCTCTTCTTCGCGGCGGAGCGGGTGGCGCCATGAGATGCGTTCGATGAGATG
TGCTTGATGAGACGCGGTTC

Downstream 100 bases:

>100_bases
CATGAGGTGCCACAGGTGAGCGCCGCCGAAAGCCTCCTTGAGGCCCGCATCACGGGGAAGACCTACCGGCGGCCCGATGG
CGTTGCCATGGAAGCGGTGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRFPWSGALVRVGSLTALLALWQAAASLAHSRALPTPEAVLAFLSKEAASGDLFSNLAVTLARVAVSFVVAMAIGTVIGV
AFGRMRRLDRVFDTWLVVLLNTPALVITVLCYIWLGLTETAAVLAVALNKIPTVAVLLREGARALSPELDEMAGAFRLSF
LDRMRHVVLPQLEPHLAGAARSGLALVWKIVLVVELLGRPNGVGYAISVYFQLFDVAAVLGYSLAFMAVMLAIEYGVLQP
FEAHARRWRLEAR

Sequences:

>Translated_253_residues
MRFPWSGALVRVGSLTALLALWQAAASLAHSRALPTPEAVLAFLSKEAASGDLFSNLAVTLARVAVSFVVAMAIGTVIGV
AFGRMRRLDRVFDTWLVVLLNTPALVITVLCYIWLGLTETAAVLAVALNKIPTVAVLLREGARALSPELDEMAGAFRLSF
LDRMRHVVLPQLEPHLAGAARSGLALVWKIVLVVELLGRPNGVGYAISVYFQLFDVAAVLGYSLAFMAVMLAIEYGVLQP
FEAHARRWRLEAR
>Mature_253_residues
MRFPWSGALVRVGSLTALLALWQAAASLAHSRALPTPEAVLAFLSKEAASGDLFSNLAVTLARVAVSFVVAMAIGTVIGV
AFGRMRRLDRVFDTWLVVLLNTPALVITVLCYIWLGLTETAAVLAVALNKIPTVAVLLREGARALSPELDEMAGAFRLSF
LDRMRHVVLPQLEPHLAGAARSGLALVWKIVLVVELLGRPNGVGYAISVYFQLFDVAAVLGYSLAFMAVMLAIEYGVLQP
FEAHARRWRLEAR

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=191, Percent_Identity=31.413612565445, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786564, Length=248, Percent_Identity=24.1935483870968, Blast_Score=60, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27392; Mature: 27392

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCC
>Mature Secondary Structure
MRFPWSGALVRVGSLTALLALWQAAASLAHSRALPTPEAVLAFLSKEAASGDLFSNLAVT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
LARVAVSFVVAMAIGTVIGVAFGRMRRLDRVFDTWLVVLLNTPALVITVLCYIWLGLTET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AAVLAVALNKIPTVAVLLREGARALSPELDEMAGAFRLSFLDRMRHVVLPQLEPHLAGAA
HHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RSGLALVWKIVLVVELLGRPNGVGYAISVYFQLFDVAAVLGYSLAFMAVMLAIEYGVLQP
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FEAHARRWRLEAR
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]