Click here to switch to the map view.

The map label for this gene is lutB [H]

Identifier: 154245712

GI number: 154245712

Start: 1993058

End: 1994530

Strand: Reverse

Name: lutB [H]

Synonym: Xaut_1768

Alternate gene names: 154245712

Gene position: 1994530-1993058 (Counterclockwise)

Preceding gene: 154245713

Following gene: 154245711

Centisome position: 37.57

GC content: 69.38

Gene sequence:

>1473_bases
ATGAGCGTCGAGATCACCTCGCCCCGCTTCAAGGACAACGCGAAGCATGCCCTCGCCGACGTGCCGCTGCAGGCGGCGCT
GTCCAAGGTCGGCCCCGGGTTCATCGGCAAGCGGACGGCGGCGGCGGAAAAGCTGCCCGAGTTCGACGCCCTGCGCGACT
CGGCGCGGGACATCAAGAACCACACGCTGGCCCACCTCGACCTCTATCTGGAGCGCTTCGAGGAGAAGGTGAAGGCGGCC
GGCGGCCATGTGCATTTCGCCGTGGACGCGGCCGAGGCCCGGGACATCGTAACGAAGATCTGCCGCGACCTCGGCGCCAG
GACCGTGACCAAGGGCAAGAGCATGATCTCGGAGGAGATCGGCCTCAACGATCACCTCTCCGCCGCCGGCATCGAGCCGG
TGGAGACGGATCTCGGCGAATATCTCATCCAGATCCGGGGCGAGGCGCCGTCCCACATCATCGCCCCCGCCATCCACCTC
AACAAGGAGCAGGTGGAGGAGGATTTCCGCCGCGTCCACGCGCACCTCGCCCCCGAGCGCAATCTCTCCGAGCCCACGGC
CCTGCTCGCCGAGGCGCGGGGCGAGCTGCGCCAGAAGTTCCTGGTGGCGGACGTGGGCATCACCGGCGCCAACTTCCTGG
TGGCGGAGACCGGCACCTCCATCATCGTCACCAACGAGGGCAACGGCGACCTCACCCAGACCCTGCCCAAGGCCCACGTC
GTGCTCGCCTCGCTGGAAAAGCTGGTGCCGACGCTGGAGGACGTGAGCCAGCTGCTGCGCGTGCTGGCCCGCTCGGCCAC
CGGGCAGGAGATGAGCGTTTACACCACCTTCTCCACCGGCCCCCGCCGTCCCGGTGACCCGGACGGGCCGGGCGAATATC
ACGTGGTGATTCTCGACAACGGCCGCTCCGGCATGCTCGGCGGCCCGCTGAAGGAGATGCTGCGCTGCATCCGCTGCGGC
GCCTGCATGAACCATTGCCCGGTCTACCATGCGGTGGGCGGGCATGCGTATGGCTGGGTCTATCCCGGCCCCATGGGATC
GGTTTTGACCCCCGCGCTCATCGGCATCGAGAAGGGCGCGAACCTGCCCAACGCCTCCACCTTCTGCGGCCGCTGCGAGG
AGGTGTGCCCGGTGCGCATCCCGCTGCCCAAGCTGATGCGACACTGGCGGGAGAAGGAGTTCGAGCGGCACCTCACGCCC
GCGCCCCAGCGCTACGGGCTTGCGGTGTGGGGCTTCTTCGCGCGGCGCGGCTGGCTTTACCGGCCGGCGACGGGCCTTGC
CATGAAGCTGCTTTCCGTCCTCGGCCGCAAGAAGGGGCGCTTCGCCGCGCTGCCACTCGCCGGCGGCTGGACCGGCCATC
GCGATTTCCCCGCGCCCGAGGGCGGCACCTTCCAGGCCCAGTGGCGCGCCCAGCGGGCCGCGCGCACGACCCGGCAGGCC
AACAGGGACGCCAACAGGGACACCCGTTCATGA

Upstream 100 bases:

>100_bases
AGCGCCAGGGCCGTCCCGTGGTGGCGCGCCATGTGGCCGAGGTGCTCGCGGGCATGGGCGACGCCCCCGCCCTCGGCGAG
CCGGCTGCGGAGAAAACCCC

Downstream 100 bases:

>100_bases
CCTCTTCCCGCGACACGGTCTTCGCCTCGGTCCGCCGCGCGCTGGGTGTCACCTCGCAGGAGGCGCCGCGCCGGCAGGAG
GTGGACGGGCGGCTTGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MSVEITSPRFKDNAKHALADVPLQAALSKVGPGFIGKRTAAAEKLPEFDALRDSARDIKNHTLAHLDLYLERFEEKVKAA
GGHVHFAVDAAEARDIVTKICRDLGARTVTKGKSMISEEIGLNDHLSAAGIEPVETDLGEYLIQIRGEAPSHIIAPAIHL
NKEQVEEDFRRVHAHLAPERNLSEPTALLAEARGELRQKFLVADVGITGANFLVAETGTSIIVTNEGNGDLTQTLPKAHV
VLASLEKLVPTLEDVSQLLRVLARSATGQEMSVYTTFSTGPRRPGDPDGPGEYHVVILDNGRSGMLGGPLKEMLRCIRCG
ACMNHCPVYHAVGGHAYGWVYPGPMGSVLTPALIGIEKGANLPNASTFCGRCEEVCPVRIPLPKLMRHWREKEFERHLTP
APQRYGLAVWGFFARRGWLYRPATGLAMKLLSVLGRKKGRFAALPLAGGWTGHRDFPAPEGGTFQAQWRAQRAARTTRQA
NRDANRDTRS

Sequences:

>Translated_490_residues
MSVEITSPRFKDNAKHALADVPLQAALSKVGPGFIGKRTAAAEKLPEFDALRDSARDIKNHTLAHLDLYLERFEEKVKAA
GGHVHFAVDAAEARDIVTKICRDLGARTVTKGKSMISEEIGLNDHLSAAGIEPVETDLGEYLIQIRGEAPSHIIAPAIHL
NKEQVEEDFRRVHAHLAPERNLSEPTALLAEARGELRQKFLVADVGITGANFLVAETGTSIIVTNEGNGDLTQTLPKAHV
VLASLEKLVPTLEDVSQLLRVLARSATGQEMSVYTTFSTGPRRPGDPDGPGEYHVVILDNGRSGMLGGPLKEMLRCIRCG
ACMNHCPVYHAVGGHAYGWVYPGPMGSVLTPALIGIEKGANLPNASTFCGRCEEVCPVRIPLPKLMRHWREKEFERHLTP
APQRYGLAVWGFFARRGWLYRPATGLAMKLLSVLGRKKGRFAALPLAGGWTGHRDFPAPEGGTFQAQWRAQRAARTTRQA
NRDANRDTRS
>Mature_489_residues
SVEITSPRFKDNAKHALADVPLQAALSKVGPGFIGKRTAAAEKLPEFDALRDSARDIKNHTLAHLDLYLERFEEKVKAAG
GHVHFAVDAAEARDIVTKICRDLGARTVTKGKSMISEEIGLNDHLSAAGIEPVETDLGEYLIQIRGEAPSHIIAPAIHLN
KEQVEEDFRRVHAHLAPERNLSEPTALLAEARGELRQKFLVADVGITGANFLVAETGTSIIVTNEGNGDLTQTLPKAHVV
LASLEKLVPTLEDVSQLLRVLARSATGQEMSVYTTFSTGPRRPGDPDGPGEYHVVILDNGRSGMLGGPLKEMLRCIRCGA
CMNHCPVYHAVGGHAYGWVYPGPMGSVLTPALIGIEKGANLPNASTFCGRCEEVCPVRIPLPKLMRHWREKEFERHLTPA
PQRYGLAVWGFFARRGWLYRPATGLAMKLLSVLGRKKGRFAALPLAGGWTGHRDFPAPEGGTFQAQWRAQRAARTTRQAN
RDANRDTRS

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate [H]

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=476, Percent_Identity=38.0252100840336, Blast_Score=360, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 53528; Mature: 53397

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEITSPRFKDNAKHALADVPLQAALSKVGPGFIGKRTAAAEKLPEFDALRDSARDIKN
CCEECCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
HTLAHLDLYLERFEEKVKAAGGHVHFAVDAAEARDIVTKICRDLGARTVTKGKSMISEEI
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
GLNDHLSAAGIEPVETDLGEYLIQIRGEAPSHIIAPAIHLNKEQVEEDFRRVHAHLAPER
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECHHHHCCHHHHHHHHHHHHHHCCCCC
NLSEPTALLAEARGELRQKFLVADVGITGANFLVAETGTSIIVTNEGNGDLTQTLPKAHV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHH
VLASLEKLVPTLEDVSQLLRVLARSATGQEMSVYTTFSTGPRRPGDPDGPGEYHVVILDN
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEC
GRSGMLGGPLKEMLRCIRCGACMNHCPVYHAVGGHAYGWVYPGPMGSVLTPALIGIEKGA
CCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCC
NLPNASTFCGRCEEVCPVRIPLPKLMRHWREKEFERHLTPAPQRYGLAVWGFFARRGWLY
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCCCC
RPATGLAMKLLSVLGRKKGRFAALPLAGGWTGHRDFPAPEGGTFQAQWRAQRAARTTRQA
CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
NRDANRDTRS
CCCCCCCCCC
>Mature Secondary Structure 
SVEITSPRFKDNAKHALADVPLQAALSKVGPGFIGKRTAAAEKLPEFDALRDSARDIKN
CEECCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
HTLAHLDLYLERFEEKVKAAGGHVHFAVDAAEARDIVTKICRDLGARTVTKGKSMISEEI
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
GLNDHLSAAGIEPVETDLGEYLIQIRGEAPSHIIAPAIHLNKEQVEEDFRRVHAHLAPER
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECHHHHCCHHHHHHHHHHHHHHCCCCC
NLSEPTALLAEARGELRQKFLVADVGITGANFLVAETGTSIIVTNEGNGDLTQTLPKAHV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHH
VLASLEKLVPTLEDVSQLLRVLARSATGQEMSVYTTFSTGPRRPGDPDGPGEYHVVILDN
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEC
GRSGMLGGPLKEMLRCIRCGACMNHCPVYHAVGGHAYGWVYPGPMGSVLTPALIGIEKGA
CCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCC
NLPNASTFCGRCEEVCPVRIPLPKLMRHWREKEFERHLTPAPQRYGLAVWGFFARRGWLY
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCCCC
RPATGLAMKLLSVLGRKKGRFAALPLAGGWTGHRDFPAPEGGTFQAQWRAQRAARTTRQA
CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
NRDANRDTRS
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA