| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is algJ [H]
Identifier: 154245694
GI number: 154245694
Start: 1973150
End: 1974232
Strand: Reverse
Name: algJ [H]
Synonym: Xaut_1750
Alternate gene names: 154245694
Gene position: 1974232-1973150 (Counterclockwise)
Preceding gene: 154245695
Following gene: 154245693
Centisome position: 37.19
GC content: 70.91
Gene sequence:
>1083_bases ATGACGCGCCTCGCCCGCACCCTCGCCACCCTGGCCTTCCTGGCGCTGATGCTCGCCGGTCTCGGCTTCGTCGCGGCGCG GCTCTCGGGCTCCGAAAGCCGGGAGGCGCTTGCGGCCGTTGCCGGCCCGGCCGACTTCCTCGAAGGCCGCTTCACCGCCG TGCTGGACAAGCAGGTGGTGGCCGCCTTGCCCAAGCTGACGGCGCTCGACGACATGGCTTCGGGCCTTGCCTATCGCCTT CTCGGCGATGCCGGGCCGCTGGTGCGCGCCGGGTGCCCGGGCTGGCTGTTTTATGCCGACGAGATCGTCGAGCCGCGCGA GCGGGAGGCCCCTGTGGCCGAGCGCATCCGGCTCGCCGCGAAGATCCGCGATCATCTCGCCGCGCGGAACATTGCCCTCG TGGTGCTGCCGGTGCCCGACAAGGCCTTGCTGGCGGCAGACAGGCTTTGCGGCCTGCCGGTGGCGGATCTGGCGGCCAAG CGTTCCGCCGCGTGGTGGGAGGGCAGCCGTGGCCTCGGCCTCGACCAGGTGGAGATCGCGCCGGGCTTTCCCGGCGCGGA CGGTTTCCTGCGCACCGACACCCATTGGAGCCCTCTGGGCGCGCGCCTTGCCGCCACGCGTGTGGCCGAGCATGTGGCGC GCAAGATCGGCGCCGGGACCCAGAAGGTGACGCTGAAGGAAAGCGCGCCGCATGCGCGCGTGGGCGACCTCATGCGCCTT GCCGGGCTGGAGCGCTCCTGGCCCTGGTCCGGTCCCGAGCCTGACCAGGTGCCGGACGTGTCCGTCGCCATCGCCCGCAC CGGCGGCCTGCTCGATGACGTGCCCGCCCCCGCGGTGGTGCTGGCGGGCTCGTCCTTCTCGCGCAATTCCGGCTTCCTGG ACTATCTGCAGGCGGCGTCCGGCTATGAGGTGGCGCAGAAGAGCGCCGACGGCAGCGGCTTTGCCGGCCAGCTTCTCGCG TTTTTGATGGATGAGCCCGAAAGTCTCGCGCAGACACGGCTCATCGTGTGGGAGTTTCCCATGCGTGCGCTCACCCGCCC GCTGACGGAGACCGAACGCCGATTTCTGGGAGATCCGACATGA
Upstream 100 bases:
>100_bases GCTGCGGGCGTGGACGGCGCTGCCCTTGTTCCTGTTCGCGGTGTTCGTGCTGCAGGGGCGGATCGTCGTGCCCTTCCTCT ATTTCCAGTTCTGACGTGCC
Downstream 100 bases:
>100_bases CGCGTCACGCCCTCACCCGCCGCCGGCTTTTGGCCGGCGTCGCCCTCGCCTCGGCGCTCGCCGTCGCGGGGATGACGGCT CCGGCGGCTGCGCAGGGCCC
Product: cell morphology protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTRLARTLATLAFLALMLAGLGFVAARLSGSESREALAAVAGPADFLEGRFTAVLDKQVVAALPKLTALDDMASGLAYRL LGDAGPLVRAGCPGWLFYADEIVEPREREAPVAERIRLAAKIRDHLAARNIALVVLPVPDKALLAADRLCGLPVADLAAK RSAAWWEGSRGLGLDQVEIAPGFPGADGFLRTDTHWSPLGARLAATRVAEHVARKIGAGTQKVTLKESAPHARVGDLMRL AGLERSWPWSGPEPDQVPDVSVAIARTGGLLDDVPAPAVVLAGSSFSRNSGFLDYLQAASGYEVAQKSADGSGFAGQLLA FLMDEPESLAQTRLIVWEFPMRALTRPLTETERRFLGDPT
Sequences:
>Translated_360_residues MTRLARTLATLAFLALMLAGLGFVAARLSGSESREALAAVAGPADFLEGRFTAVLDKQVVAALPKLTALDDMASGLAYRL LGDAGPLVRAGCPGWLFYADEIVEPREREAPVAERIRLAAKIRDHLAARNIALVVLPVPDKALLAADRLCGLPVADLAAK RSAAWWEGSRGLGLDQVEIAPGFPGADGFLRTDTHWSPLGARLAATRVAEHVARKIGAGTQKVTLKESAPHARVGDLMRL AGLERSWPWSGPEPDQVPDVSVAIARTGGLLDDVPAPAVVLAGSSFSRNSGFLDYLQAASGYEVAQKSADGSGFAGQLLA FLMDEPESLAQTRLIVWEFPMRALTRPLTETERRFLGDPT >Mature_359_residues TRLARTLATLAFLALMLAGLGFVAARLSGSESREALAAVAGPADFLEGRFTAVLDKQVVAALPKLTALDDMASGLAYRLL GDAGPLVRAGCPGWLFYADEIVEPREREAPVAERIRLAAKIRDHLAARNIALVVLPVPDKALLAADRLCGLPVADLAAKR SAAWWEGSRGLGLDQVEIAPGFPGADGFLRTDTHWSPLGARLAATRVAEHVARKIGAGTQKVTLKESAPHARVGDLMRLA GLERSWPWSGPEPDQVPDVSVAIARTGGLLDDVPAPAVVLAGSSFSRNSGFLDYLQAASGYEVAQKSADGSGFAGQLLAF LMDEPESLAQTRLIVWEFPMRALTRPLTETERRFLGDPT
Specific function: Together with AlgI and AlgF, forms an inner membrane complex which probably interacts with the alginate polymerization- transport complex and adds acetyl groups at the O-2 and O-3 positions of polymannuronic acid. Acetylation of alginate is important for
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side. Periplasm (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlgJ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38274; Mature: 38143
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLARTLATLAFLALMLAGLGFVAARLSGSESREALAAVAGPADFLEGRFTAVLDKQVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHH AALPKLTALDDMASGLAYRLLGDAGPLVRAGCPGWLFYADEIVEPREREAPVAERIRLAA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHH KIRDHLAARNIALVVLPVPDKALLAADRLCGLPVADLAAKRSAAWWEGSRGLGLDQVEIA HHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEC PGFPGADGFLRTDTHWSPLGARLAATRVAEHVARKIGAGTQKVTLKESAPHARVGDLMRL CCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH AGLERSWPWSGPEPDQVPDVSVAIARTGGLLDDVPAPAVVLAGSSFSRNSGFLDYLQAAS HCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCC GYEVAQKSADGSGFAGQLLAFLMDEPESLAQTRLIVWEFPMRALTRPLTETERRFLGDPT CHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHEEEEEECCHHHHHCCHHHHHHHHCCCCC >Mature Secondary Structure TRLARTLATLAFLALMLAGLGFVAARLSGSESREALAAVAGPADFLEGRFTAVLDKQVV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHH AALPKLTALDDMASGLAYRLLGDAGPLVRAGCPGWLFYADEIVEPREREAPVAERIRLAA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHH KIRDHLAARNIALVVLPVPDKALLAADRLCGLPVADLAAKRSAAWWEGSRGLGLDQVEIA HHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEC PGFPGADGFLRTDTHWSPLGARLAATRVAEHVARKIGAGTQKVTLKESAPHARVGDLMRL CCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH AGLERSWPWSGPEPDQVPDVSVAIARTGGLLDDVPAPAVVLAGSSFSRNSGFLDYLQAAS HCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCC GYEVAQKSADGSGFAGQLLAFLMDEPESLAQTRLIVWEFPMRALTRPLTETERRFLGDPT CHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHEEEEEECCHHHHHCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]