Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is fae-hps [H]

Identifier: 154245572

GI number: 154245572

Start: 1844929

End: 1845468

Strand: Direct

Name: fae-hps [H]

Synonym: Xaut_1627

Alternate gene names: 154245572

Gene position: 1844929-1845468 (Clockwise)

Preceding gene: 154245569

Following gene: 154245574

Centisome position: 34.75

GC content: 65.0

Gene sequence:

>540_bases
ATGACCGACATCTGGTTCAAGGCGGGTGAAGCAACCGTTCTCGCAGCGGAAGGGCAGGCCACCGACGCCATGCCGGAAGT
GCTGATCGGCTCCGTGCGCGGCCCGGTGGGGCAGGCGGTCGCCTCCATGATGGGGCAGGTGCAGGGCCACACCCGCATGT
TCGTGGTGCGCGACCTGAACCAGCTGGTGCGCCCGCTGACCATGATGACCACCAAGGCCACCATCCACACCGCCGAATAT
GTGGACCTGCTCGGCGGCGTGGTGCAGGCCGCCATGGGCGACGCCATCATCGATTGCGTCAGTGAGGGCATCCTGCCCAA
GGACGAGGTGGACGAGCTGGCCATGATCATCATGGTGTGGCTCGACCCGCGCTGCGCCGAGGACCCGGACCTCGACAAGG
CCGACCTGTATCGCACCAATTACGAGGCGACCAAGCTCGCCATTTCCCGCGCCATCAAGGGCGAGCCGTCCATTGACGAG
CTGATCGCCAACCGCAAGAGCGTCAAGCACTACGCCCTGGAAGGGGTGATCGACTACTGA

Upstream 100 bases:

>100_bases
TGGACAACGCATCCGGGCACCCTCCGGCGCAGCGACGCTGGGTCGCCGTGGACGGGGCGGCAGCGGGGTGCTTCTGTGCC
GTCCCAAACAGGAGGAAAAC

Downstream 100 bases:

>100_bases
GGGCAAGGCGCCGTCCGGGGCGGGAGGAGGTGGCTTCCTCTCGCCTCGCCCGGCGGAATGCGCCGGCACGCAAGCGGCGC
CCCACTCAGCTGTTACGGCC

Product: formaldehyde-activating protein

Products: NA

Alternate protein names: Formaldehyde-activating enzyme; Fae; 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTDIWFKAGEATVLAAEGQATDAMPEVLIGSVRGPVGQAVASMMGQVQGHTRMFVVRDLNQLVRPLTMMTTKATIHTAEY
VDLLGGVVQAAMGDAIIDCVSEGILPKDEVDELAMIIMVWLDPRCAEDPDLDKADLYRTNYEATKLAISRAIKGEPSIDE
LIANRKSVKHYALEGVIDY

Sequences:

>Translated_179_residues
MTDIWFKAGEATVLAAEGQATDAMPEVLIGSVRGPVGQAVASMMGQVQGHTRMFVVRDLNQLVRPLTMMTTKATIHTAEY
VDLLGGVVQAAMGDAIIDCVSEGILPKDEVDELAMIIMVWLDPRCAEDPDLDKADLYRTNYEATKLAISRAIKGEPSIDE
LIANRKSVKHYALEGVIDY
>Mature_178_residues
TDIWFKAGEATVLAAEGQATDAMPEVLIGSVRGPVGQAVASMMGQVQGHTRMFVVRDLNQLVRPLTMMTTKATIHTAEYV
DLLGGVVQAAMGDAIIDCVSEGILPKDEVDELAMIIMVWLDPRCAEDPDLDKADLYRTNYEATKLAISRAIKGEPSIDEL
IANRKSVKHYALEGVIDY

Specific function: Catalyzes the formation of ribulose-5-phosphate and formaldehyde from 3-hexulose-6-phosphate [H]

COG id: COG1795

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the HPS/KGPDC family. HPS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR020868
- InterPro:   IPR014826
- InterPro:   IPR001754
- InterPro:   IPR020568
- InterPro:   IPR011060 [H]

Pfam domain/function: PF08714 Fae; PF00215 OMPdecase [H]

EC number: =4.1.2.43 [H]

Molecular weight: Translated: 19495; Mature: 19364

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIWFKAGEATVLAAEGQATDAMPEVLIGSVRGPVGQAVASMMGQVQGHTRMFVVRDLN
CCCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
QLVRPLTMMTTKATIHTAEYVDLLGGVVQAAMGDAIIDCVSEGILPKDEVDELAMIIMVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LDPRCAEDPDLDKADLYRTNYEATKLAISRAIKGEPSIDELIANRKSVKHYALEGVIDY
CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDIWFKAGEATVLAAEGQATDAMPEVLIGSVRGPVGQAVASMMGQVQGHTRMFVVRDLN
CCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
QLVRPLTMMTTKATIHTAEYVDLLGGVVQAAMGDAIIDCVSEGILPKDEVDELAMIIMVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LDPRCAEDPDLDKADLYRTNYEATKLAISRAIKGEPSIDELIANRKSVKHYALEGVIDY
CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]