| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is fabG [H]
Identifier: 154245568
GI number: 154245568
Start: 1837575
End: 1838315
Strand: Direct
Name: fabG [H]
Synonym: Xaut_1623
Alternate gene names: 154245568
Gene position: 1837575-1838315 (Clockwise)
Preceding gene: 154245567
Following gene: 154245569
Centisome position: 34.61
GC content: 69.77
Gene sequence:
>741_bases ATGTTCGACTTCAGAAATCGCACCCTGCTGCTCACCGGCGCCAACGGCGGCATCTCCCGTGCCATCGCGCAGACCTTCTT CGCGCTCGGCGCCAATTGCGTGCTCACCGACCTGGACGAGGCCGGCATCGCTGCCTTCGCCCTTGAGCTCGACCCCACAG GCGCCCGCGCCGTCGGCATCCGGCAGGATGCGGCCGACCCCGCCGACGCCGACCGCGCCCTCGCTCTGGTGAAGGAGCGC TTCGGCGCGCTCGACGTGCTGGTCACCTCCGCCGGCCTCTACCGCGACCGCAAGGTGGCGGAGATGACGGACGCGCACTG GCGCACCGGCATCGCGGTCAATCTCGACGGGGTGTTCTACACCTGCCGCGCCGCCATCCCCCATTTCTCCGAGAGTGCCG CCATCGTGAACGTGGCCTCCATGGCGGGGCATCGCGGCAGCGTGGGGCATGCGGACTATGCGGCGGCCAAGGGGGCGGTG CTCAACTTCTCCCGCACGCTGGCCATGGAGCTGGCGCCCCGGGTGCGGGTGAATTCTGTCTCCCCCGGTCTCATCGACAC GCCCATGGTGCGCGGCCTGATGGACGCCAACGGCGCGGCGCTGATTGCCGGCACGCCGGCGAAGCGGCTCGGCACGCCGC AGGAGGTCGCCCGCGTGGTGGCCTTCCTCGCCTCCGACTGGGCCAGCTTCGTCACCGGCGAGACGGTCCACGTGAACGGT GGTCTTTATATTGCCAGTTGA
Upstream 100 bases:
>100_bases TCTGCCGCTTCCTGTCCTCGGACGCCGCCGCCTTCGTCACCGGCCAGGTCATCGACGTGGCCGGCGGCTGGCTCATGACC TGAAGTTCGGGAGGATCTCC
Downstream 100 bases:
>100_bases GTCGCGCCATCTTGTGTGTGGCGCAGCCGGCTGAGCTAGGAGCAACGGATGGCCCAACCCCGCGACATCATCGGCCGGGC GCCCTCCCTCGCCGAGACGC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MFDFRNRTLLLTGANGGISRAIAQTFFALGANCVLTDLDEAGIAAFALELDPTGARAVGIRQDAADPADADRALALVKER FGALDVLVTSAGLYRDRKVAEMTDAHWRTGIAVNLDGVFYTCRAAIPHFSESAAIVNVASMAGHRGSVGHADYAAAKGAV LNFSRTLAMELAPRVRVNSVSPGLIDTPMVRGLMDANGAALIAGTPAKRLGTPQEVARVVAFLASDWASFVTGETVHVNG GLYIAS
Sequences:
>Translated_246_residues MFDFRNRTLLLTGANGGISRAIAQTFFALGANCVLTDLDEAGIAAFALELDPTGARAVGIRQDAADPADADRALALVKER FGALDVLVTSAGLYRDRKVAEMTDAHWRTGIAVNLDGVFYTCRAAIPHFSESAAIVNVASMAGHRGSVGHADYAAAKGAV LNFSRTLAMELAPRVRVNSVSPGLIDTPMVRGLMDANGAALIAGTPAKRLGTPQEVARVVAFLASDWASFVTGETVHVNG GLYIAS >Mature_246_residues MFDFRNRTLLLTGANGGISRAIAQTFFALGANCVLTDLDEAGIAAFALELDPTGARAVGIRQDAADPADADRALALVKER FGALDVLVTSAGLYRDRKVAEMTDAHWRTGIAVNLDGVFYTCRAAIPHFSESAAIVNVASMAGHRGSVGHADYAAAKGAV LNFSRTLAMELAPRVRVNSVSPGLIDTPMVRGLMDANGAALIAGTPAKRLGTPQEVARVVAFLASDWASFVTGETVHVNG GLYIAS
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=33.596837944664, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI32483357, Length=242, Percent_Identity=31.8181818181818, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=31.6602316602317, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI40254992, Length=235, Percent_Identity=31.4893617021277, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI59889578, Length=225, Percent_Identity=34.6666666666667, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI4758504, Length=251, Percent_Identity=31.0756972111554, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI126723750, Length=246, Percent_Identity=30.0813008130081, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI5031737, Length=242, Percent_Identity=28.9256198347107, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=28.6290322580645, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI83715985, Length=250, Percent_Identity=30, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI4504505, Length=256, Percent_Identity=29.296875, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI7705925, Length=243, Percent_Identity=29.2181069958848, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI66933014, Length=245, Percent_Identity=27.3469387755102, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI109715829, Length=246, Percent_Identity=26.4227642276423, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI31542939, Length=199, Percent_Identity=27.6381909547739, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI33667109, Length=187, Percent_Identity=29.9465240641711, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI142976729, Length=234, Percent_Identity=26.4957264957265, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI4503301, Length=222, Percent_Identity=26.5765765765766, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI210032110, Length=185, Percent_Identity=27.5675675675676, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI310128830, Length=200, Percent_Identity=27.5, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI310115468, Length=200, Percent_Identity=27.5, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI40807363, Length=193, Percent_Identity=26.9430051813472, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=41.4634146341463, Blast_Score=182, Evalue=2e-47, Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=33.0677290836653, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=32.8063241106719, Blast_Score=120, Evalue=7e-29, Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=34.3873517786561, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=31.1740890688259, Blast_Score=104, Evalue=4e-24, Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=28.4, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=29.2682926829268, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=28.4, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI2367175, Length=262, Percent_Identity=30.9160305343511, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI87082160, Length=258, Percent_Identity=28.6821705426357, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI2367365, Length=249, Percent_Identity=34.9397590361446, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1789057, Length=200, Percent_Identity=30, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787526, Length=244, Percent_Identity=26.2295081967213, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787820, Length=181, Percent_Identity=29.2817679558011, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17555706, Length=238, Percent_Identity=37.3949579831933, Blast_Score=142, Evalue=1e-34, Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=35.9183673469388, Blast_Score=140, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=32.5396825396825, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI193203115, Length=196, Percent_Identity=34.1836734693878, Blast_Score=106, Evalue=9e-24, Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=33.8541666666667, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=29.3172690763052, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=33.0645161290323, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=31.0880829015544, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17559104, Length=277, Percent_Identity=30.6859205776173, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562910, Length=270, Percent_Identity=28.5185185185185, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71994604, Length=243, Percent_Identity=31.2757201646091, Blast_Score=90, Evalue=8e-19, Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=29.5546558704453, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17560332, Length=274, Percent_Identity=28.1021897810219, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17560150, Length=264, Percent_Identity=28.7878787878788, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=27.9245283018868, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538182, Length=251, Percent_Identity=28.6852589641434, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562904, Length=272, Percent_Identity=29.0441176470588, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17560220, Length=272, Percent_Identity=29.0441176470588, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562990, Length=270, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17508895, Length=204, Percent_Identity=28.4313725490196, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17563726, Length=273, Percent_Identity=27.1062271062271, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17568967, Length=209, Percent_Identity=29.6650717703349, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562908, Length=270, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562906, Length=272, Percent_Identity=26.8382352941176, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193204405, Length=270, Percent_Identity=28.5185185185185, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17536651, Length=250, Percent_Identity=27.6, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=25.8426966292135, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=27.037037037037, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17561272, Length=234, Percent_Identity=26.9230769230769, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17551412, Length=272, Percent_Identity=26.4705882352941, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=28.735632183908, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17531453, Length=272, Percent_Identity=27.9411764705882, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17536025, Length=249, Percent_Identity=27.3092369477912, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17567345, Length=192, Percent_Identity=25, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=237, Percent_Identity=28.6919831223629, Blast_Score=90, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6324126, Length=253, Percent_Identity=25.296442687747, Blast_Score=75, Evalue=7e-15, Organism=Drosophila melanogaster, GI24639444, Length=241, Percent_Identity=33.6099585062241, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=35.0597609561753, Blast_Score=118, Evalue=3e-27, Organism=Drosophila melanogaster, GI24644337, Length=249, Percent_Identity=35.7429718875502, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI24643142, Length=257, Percent_Identity=31.1284046692607, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=33.0677290836653, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=31.7460317460317, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=29.2, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI21357041, Length=253, Percent_Identity=32.0158102766798, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI17737361, Length=258, Percent_Identity=29.8449612403101, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI24581726, Length=198, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI18859837, Length=178, Percent_Identity=29.2134831460674, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI221331218, Length=195, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24665243, Length=195, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25716; Mature: 25716
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDFRNRTLLLTGANGGISRAIAQTFFALGANCVLTDLDEAGIAAFALELDPTGARAVGI CCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECCCCCEEEEC RQDAADPADADRALALVKERFGALDVLVTSAGLYRDRKVAEMTDAHWRTGIAVNLDGVFY CCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHCCHHHCCEEEEECCCEE TCRAAIPHFSESAAIVNVASMAGHRGSVGHADYAAAKGAVLNFSRTLAMELAPRVRVNSV EEEHHCCCCCCCHHEEEHHHHCCCCCCCCCCHHHHHCCEEEEHHHHHHHHHCCCEEECCC SPGLIDTPMVRGLMDANGAALIAGTPAKRLGTPQEVARVVAFLASDWASFVTGETVHVNG CCCCCCCHHHHHHHCCCCCEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECC GLYIAS CEEEEC >Mature Secondary Structure MFDFRNRTLLLTGANGGISRAIAQTFFALGANCVLTDLDEAGIAAFALELDPTGARAVGI CCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECCCCCEEEEC RQDAADPADADRALALVKERFGALDVLVTSAGLYRDRKVAEMTDAHWRTGIAVNLDGVFY CCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHCCHHHCCEEEEECCCEE TCRAAIPHFSESAAIVNVASMAGHRGSVGHADYAAAKGAVLNFSRTLAMELAPRVRVNSV EEEHHCCCCCCCHHEEEHHHHCCCCCCCCCCHHHHHCCEEEEHHHHHHHHHCCCEEECCC SPGLIDTPMVRGLMDANGAALIAGTPAKRLGTPQEVARVVAFLASDWASFVTGETVHVNG CCCCCCCHHHHHHHCCCCCEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECC GLYIAS CEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1556094; 8905232; 9278503; 1314802 [H]