| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is livK [C]
Identifier: 154245519
GI number: 154245519
Start: 1784857
End: 1786104
Strand: Direct
Name: livK [C]
Synonym: Xaut_1573
Alternate gene names: 154245519
Gene position: 1784857-1786104 (Clockwise)
Preceding gene: 154245518
Following gene: 154245520
Centisome position: 33.62
GC content: 65.06
Gene sequence:
>1248_bases ATGACCATCCGTGCACGTTTCCTCGCGCCGATCGCCGCGATGCTCCTCGCCTCCACCGCCGGCGCAGCCAGCGCCGAGCC GCTGAAGGTCGCGGTGATCGAGACCCTTTCCGGCCCGCAGGCCTCCACCGGCCTGCTGTTCAAGACCGCCGCCAAATACG GCATCGACAAGATCAACGCCGGCGGCGGCTATGGCGGCGAGCCGGTCGTCCTATTGGAGTACGACAACCAGGGTGGCCCG GTGGGCGCCGCTGACAAGGTGAAGGCGGCCATCGCCGACGGCGCCCGCTTTATCGTGCAGGGCGCCTCGTCGGCCGTGTC GGGCCAGATCACCGAGGACGTGCGCAAGTACAATATCCGCAACCCCGGCAAGGAAGTCATCTTCCTCAACGTGGGCGGTG AGGCGCTGGAACTGACCGGCGCCAAGTGCCACTTCCACCATTTCCGCTTCAATCCCAATGCGCAGGTGCGGGTGAAGCCC ATGGTGCTTGCCATGAAGGATGCCGGCATCCTCGGCACCCGCGTCTATTCCATGAACCAGAACTACAGCTGGGGCATCGA CATGGAGGGCGCCATCGTCGCCAATGCGCCCCTGGGCGGCTACACGGTGGTGGAAAAGACCCTCCACGACGTGAACAAGA TCCAGGACTTCTCGCCGTACGTCGCCAAGATCTCGGCCGCCAACGCCGAGACGGTGATCACCGGCAACTGGTCCAACGAC CTGCTTCTGCTCATGAAAGCGGCCCATGGCGCGGGCCTGAAGACCCGCTTCGCCACCGCCTTCCTCGACCAGCCGGGTAA TATTGCCAATGCCGGCGATGTGGCGCTCGGCAATGTGGTCGCCCACCCCTTCAACGCCGAGGCGAGCGAGGCCACTGCCG CCTTCGCCGAGGACTACAAGGCGAAGACCGGCCACTATCCGGTCTATATCGAGCCGCAGACCGCCTTCGGCGTCGCCATG GTGGGTGAGGCGCTGAAAAGCGTGCCGCCGGCCAAGGACGGCAGCGTCGACATCAATGCCGTGGCCAAGGCCCTTGAAAA CGTCAAGGTCAAGACGCCCATGGGTGAGGCCAGCATGCGCGCGGCCGACCACCAGGCGCAGATTCCCATGGTGGTCTCCA TCGTGGCGGAGGATGCCAAGTTCAAGGTGGACGGCACCAACCTCGGCTTCAAGCCCATGAAGCTCTTCACCGCCGCCGAG GCCTCCTCTCCGGTGCAGGACGCCTGCAAGATGACGCGGCCCAACTGA
Upstream 100 bases:
>100_bases GCCTTCTGGAGCGCCATTTGCGCGCGGCGGGATGAGGCCGCAGAGAGTGAAGAAGAACCGGGTGAAGCCAAGCAAAACCA CGTCCCAGGGAGGACTTTTC
Downstream 100 bases:
>100_bases ACTTTTGCGCCTCACGATCCACCATGGCCGGGACACGCCCGGCCATGGTGGCTGTCATGAAGCCGCGATCCGCCGTCCAG CCGAACACCTCTGCCTGACG
Product: branched-chain amino acid ABC transporter
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MTIRARFLAPIAAMLLASTAGAASAEPLKVAVIETLSGPQASTGLLFKTAAKYGIDKINAGGGYGGEPVVLLEYDNQGGP VGAADKVKAAIADGARFIVQGASSAVSGQITEDVRKYNIRNPGKEVIFLNVGGEALELTGAKCHFHHFRFNPNAQVRVKP MVLAMKDAGILGTRVYSMNQNYSWGIDMEGAIVANAPLGGYTVVEKTLHDVNKIQDFSPYVAKISAANAETVITGNWSND LLLLMKAAHGAGLKTRFATAFLDQPGNIANAGDVALGNVVAHPFNAEASEATAAFAEDYKAKTGHYPVYIEPQTAFGVAM VGEALKSVPPAKDGSVDINAVAKALENVKVKTPMGEASMRAADHQAQIPMVVSIVAEDAKFKVDGTNLGFKPMKLFTAAE ASSPVQDACKMTRPN
Sequences:
>Translated_415_residues MTIRARFLAPIAAMLLASTAGAASAEPLKVAVIETLSGPQASTGLLFKTAAKYGIDKINAGGGYGGEPVVLLEYDNQGGP VGAADKVKAAIADGARFIVQGASSAVSGQITEDVRKYNIRNPGKEVIFLNVGGEALELTGAKCHFHHFRFNPNAQVRVKP MVLAMKDAGILGTRVYSMNQNYSWGIDMEGAIVANAPLGGYTVVEKTLHDVNKIQDFSPYVAKISAANAETVITGNWSND LLLLMKAAHGAGLKTRFATAFLDQPGNIANAGDVALGNVVAHPFNAEASEATAAFAEDYKAKTGHYPVYIEPQTAFGVAM VGEALKSVPPAKDGSVDINAVAKALENVKVKTPMGEASMRAADHQAQIPMVVSIVAEDAKFKVDGTNLGFKPMKLFTAAE ASSPVQDACKMTRPN >Mature_414_residues TIRARFLAPIAAMLLASTAGAASAEPLKVAVIETLSGPQASTGLLFKTAAKYGIDKINAGGGYGGEPVVLLEYDNQGGPV GAADKVKAAIADGARFIVQGASSAVSGQITEDVRKYNIRNPGKEVIFLNVGGEALELTGAKCHFHHFRFNPNAQVRVKPM VLAMKDAGILGTRVYSMNQNYSWGIDMEGAIVANAPLGGYTVVEKTLHDVNKIQDFSPYVAKISAANAETVITGNWSNDL LLLMKAAHGAGLKTRFATAFLDQPGNIANAGDVALGNVVAHPFNAEASEATAAFAEDYKAKTGHYPVYIEPQTAFGVAMV GEALKSVPPAKDGSVDINAVAKALENVKVKTPMGEASMRAADHQAQIPMVVSIVAEDAKFKVDGTNLGFKPMKLFTAAEA SSPVQDACKMTRPN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=314, Percent_Identity=26.1146496815287, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43520; Mature: 43389
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS00879 ODR_DC_2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRARFLAPIAAMLLASTAGAASAEPLKVAVIETLSGPQASTGLLFKTAAKYGIDKINA CEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEEHHHHHCCCEECC GGGYGGEPVVLLEYDNQGGPVGAADKVKAAIADGARFIVQGASSAVSGQITEDVRKYNIR CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCC NPGKEVIFLNVGGEALELTGAKCHFHHFRFNPNAQVRVKPMVLAMKDAGILGTRVYSMNQ CCCCEEEEEEECCCEEEECCCEEEEEEEEECCCCEEEEEEEEEEEECCCEEEEEEEEECC NYSWGIDMEGAIVANAPLGGYTVVEKTLHDVNKIQDFSPYVAKISAANAETVITGNWSND CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECCCCCEEEECCCCCC LLLLMKAAHGAGLKTRFATAFLDQPGNIANAGDVALGNVVAHPFNAEASEATAAFAEDYK EEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCCCCHHHHHHHHHHHC AKTGHYPVYIEPQTAFGVAMVGEALKSVPPAKDGSVDINAVAKALENVKVKTPMGEASMR CCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCEEECCCCHHHHH AADHQAQIPMVVSIVAEDAKFKVDGTNLGFKPMKLFTAAEASSPVQDACKMTRPN HCCCCCCCCEEEEEEECCCEEEECCCCCCCCHHEEEEECCCCCCHHHHHHCCCCC >Mature Secondary Structure TIRARFLAPIAAMLLASTAGAASAEPLKVAVIETLSGPQASTGLLFKTAAKYGIDKINA EECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEEHHHHHCCCEECC GGGYGGEPVVLLEYDNQGGPVGAADKVKAAIADGARFIVQGASSAVSGQITEDVRKYNIR CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCC NPGKEVIFLNVGGEALELTGAKCHFHHFRFNPNAQVRVKPMVLAMKDAGILGTRVYSMNQ CCCCEEEEEEECCCEEEECCCEEEEEEEEECCCCEEEEEEEEEEEECCCEEEEEEEEECC NYSWGIDMEGAIVANAPLGGYTVVEKTLHDVNKIQDFSPYVAKISAANAETVITGNWSND CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECCCCCEEEECCCCCC LLLLMKAAHGAGLKTRFATAFLDQPGNIANAGDVALGNVVAHPFNAEASEATAAFAEDYK EEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCCCCHHHHHHHHHHHC AKTGHYPVYIEPQTAFGVAMVGEALKSVPPAKDGSVDINAVAKALENVKVKTPMGEASMR CCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCEEECCCCHHHHH AADHQAQIPMVVSIVAEDAKFKVDGTNLGFKPMKLFTAAEASSPVQDACKMTRPN HCCCCCCCCEEEEEEECCCEEEECCCCCCCCHHEEEEECCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA